RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 AARDQ4LEZ3 155 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 ANKRD16Q6P6B7 361 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 SLC16A12Q6ZSM3 486 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 OR10Z1Q8NGY1 313 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 URB1O60287 2271 aaKnown RBP11.47□□□□□ -0.57
PTCD1-201ENST00000292478 M0R1B8 84 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 PPP1R2P9O14990 202 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 CNIH1O95406 144 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 EPHA8P29322 1005 aaPredicted RBP11.47□□□□□ -0.57
PTCD1-201ENST00000292478 SPANXN5Q5MJ07 72 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 IL34Q6ZMJ4 242 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 KDF1Q8NAX2 398 aaPredicted RBP11.47□□□□□ -0.57
PTCD1-201ENST00000292478 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.47□□□□□ -0.57
PTCD1-201ENST00000292478 ADAM19Q9H013 955 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 MTFP1Q9UDX5 166 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 MTCH2Q9Y6C9 303 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 TRAV17A0A0B4J275 112 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 OR6C68A6NDL8 312 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 SHISA7A6NL88 538 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 DHRS3O75911 302 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 AQP8O94778 261 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 ZNF75AQ96N20 296 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 CLN5O75503 358 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 CDAP32320 146 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 DUSP2Q05923 314 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 HABP2Q14520 560 aaPredicted RBP11.46□□□□□ -0.57
PTCD1-201ENST00000292478 RGS7BPQ6MZT1 257 aaPredicted RBP11.46□□□□□ -0.57
PTCD1-201ENST00000292478 RPUSD3Q6P087 351 aaKnown RBP11.46□□□□□ -0.57
PTCD1-201ENST00000292478 GUSBP11Q6P575 273 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 PPP1R1CQ8WVI7 109 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 TUBG2Q9NRH3 451 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 NDRG3Q9UGV2 375 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 MYO9BQ13459 2157 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 TRGV5A0A0B4J1U4 118 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 OR2W5A6NFC9 320 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 PLPP3O14495 311 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 ZIC2O95409 532 aaPredicted RBP11.46□□□□□ -0.57
PTCD1-201ENST00000292478 COX5AP20674 150 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 YBX1P67809 324 aaKnown RBP11.46□□□□□ -0.57
PTCD1-201ENST00000292478 ERHP84090 104 aaKnown RBP11.46□□□□□ -0.57
PTCD1-201ENST00000292478 HES1Q14469 280 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 RHBDD2Q6NTF9 364 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 COMMD1Q8N668 190 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 OR4S1Q8NGB4 309 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 OR10X1Q8NGY0 326 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 ST8SIA2Q92186 375 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 KISS1RQ969F8 398 aaPredicted RBP11.46□□□□□ -0.57
PTCD1-201ENST00000292478 ZC3HAV1LQ96H79 300 aaKnown RBP11.46□□□□□ -0.57
PTCD1-201ENST00000292478 RPP25Q9BUL9 199 aaKnown RBP11.46□□□□□ -0.57
PTCD1-201ENST00000292478 PSENENQ9NZ42 101 aa11.46□□□□□ -0.57
PTCD1-201ENST00000292478 MBTPS2O43462 519 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.58
PTCD1-201ENST00000292478 NME2P1O60361 137 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 GNG3P63215 75 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 DEFB109BQ30KR1 87 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 ADGRG3Q86Y34 549 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 AKR7LQ8NHP1 331 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 ST8SIA4Q92187 359 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 GALMQ96C23 342 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 C1QTNF6Q9BXI9 259 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 PATZ1Q9HBE1 687 aaKnown RBP11.46□□□□□ -0.58
PTCD1-201ENST00000292478 PCOLCE2Q9UKZ9 415 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 K7EQS6 105 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 FAM157BP0CG42 384 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 SPNP16150 400 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 EIF4EBP2Q13542 120 aaPredicted RBP11.46□□□□□ -0.58
PTCD1-201ENST00000292478 MPPED2Q15777 294 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 GSG1Q2KHT4 349 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 ISXQ2M1V0 245 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 ZNF468Q5VIY5 522 aaPredicted RBP11.46□□□□□ -0.58
PTCD1-201ENST00000292478 BAGE3Q86Y29 109 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 BAGE2Q86Y30 109 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.58
PTCD1-201ENST00000292478 UMAD1C9J7I0 102 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 PYCARD-AS1I3L0S3 204 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 ST8SIA5O15466 376 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 ZFPL1O95159 310 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 SRD5A2P31213 254 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 PDZK1IP1Q13113 114 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 C11orf87Q6NUJ2 197 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 OR10G3Q8NGC4 313 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 ORAI1Q96D31 301 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 MRPS24Q96EL2 167 aaKnown RBP11.45□□□□□ -0.58
PTCD1-201ENST00000292478 C14orf79Q96F83 325 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 KIAA1456Q9P272 454 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 TMEM272A0A1B0GTI8 110 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 TMEM30CPA0ZSE6 113 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 MGST1P10620 155 aaKnown RBP11.45□□□□□ -0.58
PTCD1-201ENST00000292478 FLI1Q01543 452 aaPredicted RBP11.45□□□□□ -0.58
PTCD1-201ENST00000292478 BATF2Q8N1L9 274 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 MAFAQ8NHW3 353 aaPredicted RBP11.45□□□□□ -0.58
PTCD1-201ENST00000292478 FOCADQ5VW36 1801 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 CD37P11049 281 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 HIST1H1DP16402 221 aaKnown RBP11.45□□□□□ -0.58
PTCD1-201ENST00000292478 NPBWR1P48145 328 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 UQCC3Q6UW78 93 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 PRSS41Q7RTY9 318 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 SPICQ8N5J4 248 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 LSMEM1Q8N8F7 131 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 MITD1Q8WV92 249 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms