RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 IGHV2-70DA0A0C4DH43 119 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 A6NLC8 198 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 LGALS8O00214 317 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 CIB2O75838 187 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 CFL1P23528 166 aaKnown RBP12.01□□□□□ -0.49
HMGN3-201ENST00000275036 CPT2P23786 658 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 ROM1Q03395 351 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 NXNL2Q5VZ03 156 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 WDR25Q64LD2 544 aaPredicted RBP12.01□□□□□ -0.49
HMGN3-201ENST00000275036 BCL6BQ8N143 479 aaPredicted RBP12.01□□□□□ -0.49
HMGN3-201ENST00000275036 OR1M1Q8NGA1 313 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 OR8S1Q8NH09 359 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 PPP1R14AQ96A00 147 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 ITPKCQ96DU7 683 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 CENPNQ96H22 339 aaPredicted RBP12.01□□□□□ -0.49
HMGN3-201ENST00000275036 OR8B4Q96RC9 309 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 CNN2Q99439 309 aaKnown RBP12.01□□□□□ -0.49
HMGN3-201ENST00000275036 PAPOLGQ9BWT3 736 aaKnown RBP12.01□□□□□ -0.49
HMGN3-201ENST00000275036 RGCCQ9H4X1 137 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 NIPAL2Q9H841 368 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 ADGRL4Q9HBW9 690 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 C14orf119Q9NWQ9 140 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 ZNF69Q9UC07 566 aa12.01□□□□□ -0.49
HMGN3-201ENST00000275036 SOX21Q9Y651 276 aaPredicted RBP12.01□□□□□ -0.49
HMGN3-201ENST00000275036 NBEAL1Q6ZS30 2694 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 IGHV3OR15-7A0A075B7D8 119 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 hCG_1807616A0A1W2PRN6 198 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 OOEPA6NGQ2 149 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 SAC3D1A6NKF1 404 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 ZNF850A8MQ14 1090 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 C22orf46C9J442 243 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 H3BNX3 289 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 MAGEB4O15481 346 aaPredicted RBP12□□□□□ -0.49
HMGN3-201ENST00000275036 ELF3P78545 371 aaPredicted RBP12□□□□□ -0.49
HMGN3-201ENST00000275036 MFGE8Q08431 387 aaPredicted RBP12□□□□□ -0.49
HMGN3-201ENST00000275036 MZT1Q08AG7 82 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 POU4F2Q12837 409 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 PRDX4Q13162 271 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 SCGB2A2Q13296 93 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 KPNB1Q14974 876 aaKnown RBP12□□□□□ -0.49
HMGN3-201ENST00000275036 KCTD18Q6PI47 426 aaPredicted RBP12□□□□□ -0.49
HMGN3-201ENST00000275036 DEGS2Q6QHC5 323 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 WDR82Q6UXN9 313 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 NLRC3Q7RTR2 1065 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 FAM90A1Q86YD7 464 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 ZNF679Q8IYX0 411 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 CSNK2A3Q8NEV1 391 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 HPSE2Q8WWQ2 592 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 RAB40AQ8WXH6 277 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 C1orf147Q96MC9 270 aaPredicted RBP12□□□□□ -0.49
HMGN3-201ENST00000275036 ZNF48Q96MX3 618 aaPredicted RBP12□□□□□ -0.49
HMGN3-201ENST00000275036 PKP2Q99959 881 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 OSBPL10Q9BXB5 764 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 GABARAPL3Q9BY60 117 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 PRRG3Q9BZD7 231 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 SMURF1Q9HCE7 757 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 CLN8Q9UBY8 286 aa12□□□□□ -0.49
HMGN3-201ENST00000275036 TMEM269A0A1B0GVZ9 245 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.99□□□□□ -0.49
HMGN3-201ENST00000275036 PHYHO14832 338 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 SRSF10O75494 262 aaKnown RBP11.99□□□□□ -0.49
HMGN3-201ENST00000275036 CST4P01036 141 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 IGLV3-1P01715 115 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 GYPAP02724 150 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 IGHV4-38-2P0DP08 117 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 GNALP38405 381 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 CXCR4P61073 352 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 ACTR3P61158 418 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 ARMCX4Q5H9R4 360 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 TEX36Q5VZQ5 186 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 SLC35F2Q8IXU6 374 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 BPIFB2Q8N4F0 458 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 SIGLECL1Q8N7X8 197 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 FAM216AQ8WUB2 273 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 LRRC29Q8WV35 223 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 SEH1LQ96EE3 360 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 APOL4Q9BPW4 351 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 MRI1Q9BV20 369 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 SUCNR1Q9BXA5 334 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 MROQ9BYG7 248 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 PBOV1Q9GZY1 135 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 TLNRD1Q9H1K6 362 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 RASSF4Q9H2L5 321 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 RIBC2Q9H4K1 309 aa11.99□□□□□ -0.49
HMGN3-201ENST00000275036 IGHV3OR16-10A0A075B7F0 116 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 TRAV38-1A0A0B4J264 116 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 A0A0U1RQV5 110 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 KIR2DS1A0A191URI9 304 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 A0A1B0GW55 424 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 TMEM89A2RUT3 159 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 SLC22A31A6NKX4 558 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 CDIPTO14735 213 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 ADAM20O43506 726 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 ZNF254O75437 659 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 DUX4L2P0CJ85 424 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 DUX4L3P0CJ86 424 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 DUX4L4P0CJ87 422 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 DUX4L5P0CJ88 424 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 DUX4L6P0CJ89 424 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 DUX4L7P0CJ90 424 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms