RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 PAX6P26367 422 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 GPR3P46089 330 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 DRAM2Q6UX65 266 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 FAM103A1Q9BTL3 118 aaKnown RBP10.3□□□□□ -0.76
USP53-201ENST00000274030 LIN7CQ9NUP9 197 aaKnown RBP10.3□□□□□ -0.76
USP53-201ENST00000274030 ZNF230Q9UIE0 474 aaPredicted RBP10.3□□□□□ -0.76
USP53-201ENST00000274030 FAM96BQ9Y3D0 163 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 STRAPQ9Y3F4 350 aaKnown RBP10.3□□□□□ -0.76
USP53-201ENST00000274030 KPTNQ9Y664 436 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 NINQ8N4C6 2090 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 ATG2BQ96BY7 2078 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 LFNGQ8NES3 379 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 GPX8Q8TED1 209 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 SOX7Q9BT81 388 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 P4HTMQ9NXG6 502 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 TRGV5A0A0B4J1U4 118 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 ARRDC5A6NEK1 342 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 ERHP84090 104 aaKnown RBP10.3□□□□□ -0.76
USP53-201ENST00000274030 SRSF5Q13243 272 aaKnown RBP10.3□□□□□ -0.76
USP53-201ENST00000274030 RPUSD3Q6P087 351 aaKnown RBP10.3□□□□□ -0.76
USP53-201ENST00000274030 OR2Z1Q8NG97 314 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 OTOSQ8NHW6 89 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 ERGIC1Q969X5 290 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 EID2BQ96D98 161 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 SLC25A32Q9H2D1 315 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 SCO1O75880 301 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 NME1P15531 152 aaKnown RBP10.3□□□□□ -0.76
USP53-201ENST00000274030 FAM109BQ6ICB4 259 aaPredicted RBP10.3□□□□□ -0.76
USP53-201ENST00000274030 SKA3Q8IX90 412 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 ADPRHL1Q8NDY3 354 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 CMBLQ96DG6 245 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 CLCF1Q9UBD9 225 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 TMEFF2Q9UIK5 374 aaPredicted RBP10.3□□□□□ -0.76
USP53-201ENST00000274030 R4GN57 208 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 CCL2P13500 99 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 COL9A1P20849 921 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 CLDN20P56880 219 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 RPL7L1Q6DKI1 246 aaKnown RBP10.29□□□□□ -0.76
USP53-201ENST00000274030 SLC39A7Q92504 469 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 TAAR9Q96RI9 348 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 MMP25Q9NPA2 562 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 ZNF391Q9UJN7 358 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 SIGLEC7Q9Y286 467 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 ZNF835Q9Y2P0 537 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 YBX2Q9Y2T7 364 aaKnown RBP10.29□□□□□ -0.76
USP53-201ENST00000274030 TOGARAM1Q9Y4F4 1720 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 CEP290O15078 2479 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 E5RGE8 158 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 PYCARD-AS1I3L0S3 204 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 TOX4O94842 621 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 KRASP01116 189 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 FABP1P07148 127 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 PATE4P0C8F1 98 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 OR2T2Q6IF00 324 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 TMEM88Q6PEY1 159 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 RFESDQ8TAC1 157 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 GNPNAT1Q96EK6 184 aaPredicted RBP10.29□□□□□ -0.76
USP53-201ENST00000274030 TMPRSS13Q9BYE2 586 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 ADGRL4Q9HBW9 690 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 NSG2Q9Y328 171 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 LAMA4Q16363 1823 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 DEFB108AA8MXU0 73 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 SLC25A4P12235 298 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 ZNF83P51522 516 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 WNT3P56703 355 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 ZNF787Q6DD87 383 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 LIMS2Q7Z4I7 341 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 LYG2Q86SG7 212 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 CALHM3Q86XJ0 350 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 OR1F12Q8NHA8 337 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 ACY3Q96HD9 319 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 MRGPRX3Q96LB0 322 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 OR8B4Q96RC9 309 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 ARHGDIGQ99819 225 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 SRRQ9GZT4 340 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 FBXL4Q9UKA2 621 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 CDC14BO60729 498 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 ZNF628Q5EBL2 1059 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 MSRB3Q8IXL7 192 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 KDF1Q8NAX2 398 aaPredicted RBP10.29□□□□□ -0.76
USP53-201ENST00000274030 OR52N4Q8NGI2 321 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 GALMQ96C23 342 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 A0A0B4J2E0 115 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 A0A1B0GX12 115 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 CLEC18AA5D8T8 446 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 TAAR5O14804 337 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 FCER1GP30273 86 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 AKR1C3P42330 323 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 CLEC18CQ8NCF0 446 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 OR5AP2Q8NGF4 316 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 ST8SIA2Q92186 375 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 TMEM230Q96A57 120 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 C2orf50Q96LR7 162 aa10.29□□□□□ -0.76
USP53-201ENST00000274030 ACTR3CQ9C0K3 210 aaPredicted RBP10.29□□□□□ -0.76
USP53-201ENST00000274030 MYH14Q7Z406 1995 aaKnown RBP10.29□□□□□ -0.76
USP53-201ENST00000274030 CCDC187A0A096LP49 1063 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 ALG1L2C9J202 215 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 CHEK1O14757 476 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 WDR38Q5JTN6 314 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 BTLAQ7Z6A9 289 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms