RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 FAIMQ9NVQ4 179 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 MRPS7Q9Y2R9 242 aaKnown RBP14.17□□□□□ -0.14
TPM1-201ENST00000267996 PRRG2O14669 202 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 HCKP08631 526 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 SPNP16150 400 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 CCNOP22674 350 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 WNT5AP41221 380 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 TAS2R20P59543 309 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 DNM1P46Q6ZS02 220 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 BEND4Q6ZU67 534 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 C17orf78Q8N4C9 275 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 SLC30A7Q8NEW0 376 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 SPSB1Q96BD6 273 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 C1orf147Q96MC9 270 aaPredicted RBP14.16□□□□□ -0.14
TPM1-201ENST00000267996 SFXN3Q9BWM7 321 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 C11orf54Q9H0W9 315 aaPredicted RBP14.16□□□□□ -0.14
TPM1-201ENST00000267996 ASF1BQ9NVP2 202 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 TBCCD1Q9NVR7 557 aa14.16□□□□□ -0.14
TPM1-201ENST00000267996 MYO7BQ6PIF6 2116 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 GGT3PA6NGU5 568 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 EEF1E1O43324 174 aaKnown RBP14.15□□□□□ -0.14
TPM1-201ENST00000267996 GMDSO60547 372 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 ICMTO60725 284 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 CBR1P16152 277 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 ALDH3B1P43353 468 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 MRPS10P82664 201 aaKnown RBP14.15□□□□□ -0.14
TPM1-201ENST00000267996 DGCR2P98153 550 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 GK2Q14410 553 aaPredicted RBP14.15□□□□□ -0.14
TPM1-201ENST00000267996 KISS1Q15726 138 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 PRR30Q53SZ7 412 aaPredicted RBP14.15□□□□□ -0.14
TPM1-201ENST00000267996 CLVS2Q5SYC1 327 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 GFRALQ6UXV0 394 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 CXorf67Q86X51 503 aaPredicted RBP14.15□□□□□ -0.14
TPM1-201ENST00000267996 ANGPTL5Q86XS5 388 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 PAQR4Q8N4S7 273 aaPredicted RBP14.15□□□□□ -0.14
TPM1-201ENST00000267996 ZCCHC14Q8WYQ9 949 aaKnown RBP14.15□□□□□ -0.14
TPM1-201ENST00000267996 SPACA5Q96QH8 159 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 OBP2BQ9NPH6 170 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 DIABLOQ9NR28 239 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 RAB22AQ9UL26 194 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 STARD10Q9Y365 291 aa14.15□□□□□ -0.14
TPM1-201ENST00000267996 ZGRF1Q86YA3 2104 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 A0A0A6YYH2 397 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 A6NJ64 397 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 TMEM14DPA8MWL7 114 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 GABARAPH6UMI1 98 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 J3QW42 95 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 NGFP01138 241 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 VSIG8P0DPA2 414 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 MALLQ13021 153 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 TSC22D1Q15714 1073 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 UBASH3BQ8TF42 649 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 OPA3Q9H6K4 179 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 GPR173Q9NS66 373 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 MRPS28Q9Y2Q9 187 aaKnown RBP14.14□□□□□ -0.15
TPM1-201ENST00000267996 hCG_2014768A0A024R1R8 64 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 ZNF816-ZNF321PA0A0X1KG74 233 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 LINC00854A0A1B0GVQ3 168 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 SSX4O60224 188 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 KDM4BO94953 1096 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 IGKV3-15P01624 115 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 UBBP0CG47 229 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 NAT2P11245 290 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 PRKACBP22694 351 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 OR3A4PP47883 348 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 PRSS12P56730 875 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 UNC119Q13432 240 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 TBC1D28Q2M2D7 210 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 AWAT2Q6E213 333 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 OR10K2Q6IF99 312 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 ZNF474Q6S9Z5 364 aaPredicted RBP14.14□□□□□ -0.15
TPM1-201ENST00000267996 CCBE1Q6UXH8 406 aaPredicted RBP14.14□□□□□ -0.15
TPM1-201ENST00000267996 C3P1Q6ZMU1 363 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 OR2W3Q7Z3T1 314 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 NRARPQ7Z6K4 114 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 MYPOPQ86VE0 399 aaPredicted RBP14.14□□□□□ -0.15
TPM1-201ENST00000267996 ZNF101Q8IZC7 436 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 ITPKCQ96DU7 683 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 SLC22A4Q9H015 551 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 ATG5Q9H1Y0 275 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 GHRLQ9UBU3 117 aa14.14□□□□□ -0.15
TPM1-201ENST00000267996 RBMX2Q9Y388 322 aaKnown RBP14.14□□□□□ -0.15
TPM1-201ENST00000267996 RP1L1Q8IWN7 2480 aaPredicted RBP14.13□□□□□ -0.15
TPM1-201ENST00000267996 NRASP01111 189 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 CELA3BP08861 270 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 CD3GP09693 182 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 PTGFRP43088 359 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 PMPCAQ10713 525 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 CNN3Q15417 329 aaKnown RBP14.13□□□□□ -0.15
TPM1-201ENST00000267996 GLIPR1L1Q6UWM5 242 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 BHLHA15Q7RTS1 189 aaPredicted RBP14.13□□□□□ -0.15
TPM1-201ENST00000267996 FAM169BQ8N8A8 192 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 PIGTQ969N2 578 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 TECTBQ96PL2 329 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 POFUT1Q9H488 388 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 PRORYQ9H606 182 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 NEK6Q9HC98 313 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 CHD8Q9HCK8 2581 aa14.13□□□□□ -0.15
TPM1-201ENST00000267996 A0A1W2PR80 420 aa14.12□□□□□ -0.15
TPM1-201ENST00000267996 HOXC12P31275 282 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms