RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 TRPM6Q9BX84 2022 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 TGOLN2O43493 480 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 CLN5O75503 358 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 APOA2P02652 100 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 MYBPHQ13203 477 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 ZNF141Q15928 474 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 CEACAM16Q2WEN9 425 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 EGLN1Q9GZT9 426 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 PPP1R3CQ9UQK1 317 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 ZNF831Q5JPB2 1677 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 IGHV3-15A0A0B4J1V0 119 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 PMS2P1A4D2B8 440 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 ZNF891A8MT65 544 aaPredicted RBP9.66□□□□□ -0.86
CD44-201ENST00000263398 LINC01565O15544 149 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 SCO1O75880 301 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 PDGFBP01127 241 aaPredicted RBP9.66□□□□□ -0.86
CD44-201ENST00000263398 MVDP53602 400 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 DUSP2Q05923 314 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 OR2W3Q7Z3T1 314 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 C2CD4CQ8TF44 421 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 DECR2Q9NUI1 292 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 CYB5R1Q9UHQ9 305 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 OSGIN2Q9Y236 505 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 SIRPB1O00241 398 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 PIAS2O75928 621 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 EPPINO95925 133 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 CDKN2AP42771 156 aaKnown RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 NPBWR1P48145 328 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 DSCR4P56555 118 aaPredicted RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 ENDOGQ14249 297 aaKnown RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 IL34Q6ZMJ4 242 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 ETFBKMTQ8IXQ9 262 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 OR5M8Q8NGP6 311 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 OR2V1Q8NHB1 315 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 SARAFQ96BY9 339 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 TECTBQ96PL2 329 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 CIB3Q96Q77 187 aaPredicted RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 VN1R1Q9GZP7 353 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 TRIP12Q14669 1992 aaPredicted RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 FUT3P21217 361 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 SLC6A1P30531 599 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 CDAP32320 146 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 GABRA4P48169 554 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 HTRA4P83105 476 aaPredicted RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 GSG1Q2KHT4 349 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 Q6ZS52 159 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 TMPRSS7Q7RTY8 843 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 THNSL2Q86YJ6 484 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 SPICQ8N5J4 248 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 ANGPTL6Q8NI99 470 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 CMTM2Q8TAZ6 248 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 GPBAR1Q8TDU6 330 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 MITD1Q8WV92 249 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 CORO2AQ92828 525 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 HGDQ93099 445 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 BSCL2Q96G97 398 aaPredicted RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 CCDC74BQ96LY2 380 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 ZNF75AQ96N20 296 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 ALKBH3Q96Q83 286 aaPredicted RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 C12orf10Q9HB07 376 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 PPP1R14DQ9NXH3 145 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 FBXO4Q9UKT5 387 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 LAMP3Q9UQV4 416 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 FFAR1O14842 300 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 MBP02144 154 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 S100A8P05109 93 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 MGST1P10620 155 aaKnown RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 SUB1P53999 127 aaKnown RBP eCLIP9.65□□□□□ -0.86
CD44-201ENST00000263398 INSM1Q01101 510 aaPredicted RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 DHRS2Q13268 280 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 C9orf50Q5SZB4 431 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 DMKNQ6E0U4 476 aaPredicted RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 ZNF687Q8N1G0 1237 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 ZFP62Q8NB50 900 aaPredicted RBP9.65□□□□□ -0.86
CD44-201ENST00000263398 OIT3Q8WWZ8 545 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 FOXB1Q99853 325 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 C1QTNF6Q9BXI9 259 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 DEFB127Q9H1M4 99 aa9.65□□□□□ -0.86
CD44-201ENST00000263398 TNFSF11O14788 317 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 ANGPTL7O43827 346 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 ACSM4P0C7M7 580 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 NDUFB7P17568 137 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 GLRA1P23415 457 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 FPR2P25090 351 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 DMRTC1Q5HYR2 192 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 TMEM88Q6PEY1 159 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 UQCC3Q6UW78 93 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 DRAM2Q6UX65 266 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 SSX9Q7RTT3 188 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 SMIM15Q7Z3B0 74 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 FBXL14Q8N1E6 418 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 ZNF784Q8NCA9 323 aaPredicted RBP9.65□□□□□ -0.87
CD44-201ENST00000263398 OR1J1Q8NGS3 322 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 AKR7LQ8NHP1 331 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 ZNF707Q96C28 371 aaPredicted RBP9.65□□□□□ -0.87
CD44-201ENST00000263398 ACTR3CQ9C0K3 210 aaPredicted RBP9.65□□□□□ -0.87
CD44-201ENST00000263398 MAGT1Q9H0U3 335 aa9.65□□□□□ -0.87
CD44-201ENST00000263398 CTAG2O75638 210 aa9.64□□□□□ -0.87
CD44-201ENST00000263398 CRYAAP02489 173 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms