RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 FNDC9Q8TBE3 224 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 KISS1RQ969F8 398 aaPredicted RBP7.34□□□□□ -1.23
PTPN3-201ENST00000262539 UBTD1Q9HAC8 227 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 ZNF71Q9NQZ8 489 aaPredicted RBP7.34□□□□□ -1.23
PTPN3-201ENST00000262539 DTX4Q9Y2E6 619 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 PRELID3BQ9Y3B1 194 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 AK6Q9Y3D8 172 aaKnown RBP7.34□□□□□ -1.23
PTPN3-201ENST00000262539 IGLV1-36A0A0B4J1U3 117 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 CRHP06850 196 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 CTSSP25774 331 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 ZNF133P52736 654 aaPredicted RBP7.34□□□□□ -1.23
PTPN3-201ENST00000262539 CD276Q5ZPR3 534 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 SLC26A10Q8NG04 563 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 ACKR4Q9NPB9 350 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 UBQLN2Q9UHD9 624 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 I3L521 148 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 DEGS1O15121 323 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 SCO1O75880 301 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 NTN1O95631 604 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 GYPBP06028 91 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 RAP2BP61225 183 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 NKX6-1P78426 367 aaPredicted RBP7.34□□□□□ -1.23
PTPN3-201ENST00000262539 C1orf100Q5SVJ3 147 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 FAM27BQ5VT28 67 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 LCN10Q6JVE6 187 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 ARRDC1Q8N5I2 433 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 OR51A2Q8NGJ7 313 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 TMEM45BQ96B21 275 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 KCNK17Q96T54 332 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 NTNG1Q9Y2I2 539 aa7.34□□□□□ -1.23
PTPN3-201ENST00000262539 IGHV3-64DA0A0J9YX35 117 aa7.34□□□□□ -1.24
PTPN3-201ENST00000262539 LOC107986453A0A1B0GWG9 222 aa7.34□□□□□ -1.24
PTPN3-201ENST00000262539 H3BMH7 237 aa7.34□□□□□ -1.24
PTPN3-201ENST00000262539 BOLA2-SMG1P6H3BVE0 249 aa7.34□□□□□ -1.24
PTPN3-201ENST00000262539 TRAF3IP2O43734 574 aaPredicted RBP7.34□□□□□ -1.24
PTPN3-201ENST00000262539 CRYABP02511 175 aaKnown RBP7.34□□□□□ -1.24
PTPN3-201ENST00000262539 FABP1P07148 127 aa7.34□□□□□ -1.24
PTPN3-201ENST00000262539 CFPP27918 469 aa7.34□□□□□ -1.24
PTPN3-201ENST00000262539 COL4A3Q01955 1670 aa7.34□□□□□ -1.24
PTPN3-201ENST00000262539 DCAF10Q5QP82 559 aa7.34□□□□□ -1.24
PTPN3-201ENST00000262539 ANKRD16Q6P6B7 361 aa7.34□□□□□ -1.24
PTPN3-201ENST00000262539 SLC25A31Q9H0C2 315 aa7.34□□□□□ -1.24
PTPN3-201ENST00000262539 TP63Q9H3D4 680 aaPredicted RBP7.34□□□□□ -1.24
PTPN3-201ENST00000262539 IGHV1-45A0A0A0MS14 117 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 SNRPGP15A8MWD9 76 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 AKAIN1P0CW23 69 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 CDKN2AP42771 156 aaKnown RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 SERPINA12Q8IW75 414 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 UHRF2Q96PU4 802 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ALX4Q9H161 411 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 NOX4Q9NPH5 578 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 LOC390937A0A1W2PQ73 354 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ZNF705FA8MVS1 300 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 H7C1C5 153 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 TFP02787 698 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 CST2P09228 141 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ZNF705DP0CH99 300 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ZNF705BP0CI00 300 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 RAB6AP20340 208 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 IDH3GP51553 393 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 LCN6P62502 163 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 CMTM4Q8IZR5 234 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 RTL8AQ9BWD3 113 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 LINC00470Q9BZP3 86 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 FBXL4Q9UKA2 621 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 TGFBR3LH3BV60 316 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ZFPL1O95159 310 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 HNF1AP20823 631 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 CHATP28329 748 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 SHC1P29353 583 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 RFC3P40938 356 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 RBMS2Q15434 407 aaKnown RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 TRIP6Q15654 476 aaKnown RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 MESTQ5EB52 335 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ZNF519Q8TB69 540 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 TSSK2Q96PF2 358 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 GPR137BO60478 399 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 SURF2Q15527 256 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 PCK2Q16822 640 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ZNF362Q5T0B9 420 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 FAM109AQ8N4B1 249 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 SECTM1Q8WVN6 248 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ASB10Q8WXI3 467 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 FAM3DQ96BQ1 224 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 FBXO17Q96EF6 278 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ASF1BQ9NVP2 202 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 COA3Q9Y2R0 106 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 FBXO7Q9Y3I1 522 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 CHEK1O14757 476 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 SGCEO43556 437 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 IL5P05113 134 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 TAS2R46P59540 309 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 SRPXP78539 464 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 IGF2-ASQ6U949 168 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 PPP1R32Q7Z5V6 425 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 FADS6Q8N9I5 356 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 TRMT61AQ96FX7 289 aaKnown RBP7.33□□□□□ -1.24
PTPN3-201ENST00000262539 MOGAT1Q96PD6 335 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 TSNAXQ99598 290 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms