RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 NAAAQ02083 359 aa17.08■□□□□ 0.33
SCARB1-201ENST00000261693 PNLIPRP3Q17RR3 467 aa17.08■□□□□ 0.33
SCARB1-201ENST00000261693 THEM4Q5T1C6 240 aa17.08■□□□□ 0.33
SCARB1-201ENST00000261693 GALNTL5Q7Z4T8 443 aa17.08■□□□□ 0.33
SCARB1-201ENST00000261693 UEVLDQ8IX04 471 aa17.08■□□□□ 0.33
SCARB1-201ENST00000261693 ARRDC1Q8N5I2 433 aa17.08■□□□□ 0.33
SCARB1-201ENST00000261693 SLC7A5P2Q9GIP4 190 aa17.08■□□□□ 0.33
SCARB1-201ENST00000261693 RAB18Q9NP72 206 aa17.08■□□□□ 0.33
SCARB1-201ENST00000261693 MMP26Q9NRE1 261 aa17.08■□□□□ 0.33
SCARB1-201ENST00000261693 UQCC1Q9NVA1 299 aa17.08■□□□□ 0.33
SCARB1-201ENST00000261693 NPIPB13A6NJU9 1138 aa17.08■□□□□ 0.32
SCARB1-201ENST00000261693 ZNF814B7Z6K7 855 aa17.08■□□□□ 0.32
SCARB1-201ENST00000261693 NPIPB4C9JG80 1138 aa17.08■□□□□ 0.32
SCARB1-201ENST00000261693 OR3A2P47893 321 aa17.08■□□□□ 0.32
SCARB1-201ENST00000261693 ZNF41P51814 821 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-201ENST00000261693 GABREP78334 506 aa17.08■□□□□ 0.32
SCARB1-201ENST00000261693 SHEQ5VZ18 495 aa17.08■□□□□ 0.32
SCARB1-201ENST00000261693 PRSS54Q6PEW0 395 aa17.08■□□□□ 0.32
SCARB1-201ENST00000261693 C1QL2Q7Z5L3 287 aa17.08■□□□□ 0.32
SCARB1-201ENST00000261693 OR51T1Q8NGJ9 327 aa17.08■□□□□ 0.32
SCARB1-201ENST00000261693 NUDT16L1Q9BRJ7 211 aaKnown RBP17.08■□□□□ 0.32
SCARB1-201ENST00000261693 E9PLN8 166 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 KNG1P01042 644 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 KLK2P20151 261 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 CSNK1EP49674 416 aaKnown RBP17.07■□□□□ 0.32
SCARB1-201ENST00000261693 CSNK2A1P68400 391 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-201ENST00000261693 AADACL3Q5VUY0 350 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 PLXDC1Q8IUK5 500 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 CSNK2A3Q8NEV1 391 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 PPP4R1LQ9P1A2 415 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 KLHL13Q9P2N7 655 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 LPAR3Q9UBY5 353 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 IGKV1-9A0A0C4DH69 117 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 AGPAT2O15120 278 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 RAMP1O60894 148 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 SFTPBP07988 381 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 PGA4P0DJD7 388 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 PGA3P0DJD8 388 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 HNRNPKP61978 463 aaKnown RBP eCLIP17.07■□□□□ 0.321e-6■■■■□ 22.7
SCARB1-201ENST00000261693 OGFOD3Q6PK18 319 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 ZNF283Q8N7M2 679 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 NOXO1Q8NFA2 376 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 LIN37Q96GY3 246 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-201ENST00000261693 CDC6Q99741 560 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 EHFQ9NZC4 300 aa17.07■□□□□ 0.32
SCARB1-201ENST00000261693 CARHSP1Q9Y2V2 147 aaKnown RBP17.07■□□□□ 0.32
SCARB1-201ENST00000261693 TRBV11-1A0A0K0K1C0 115 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 MFNGO00587 321 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 MBTPS2O43462 519 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 IGHG1P01857 330 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 RCC1P18754 421 aaPredicted RBP17.06■□□□□ 0.32
SCARB1-201ENST00000261693 SNU13P55769 128 aaKnown RBP17.06■□□□□ 0.32
SCARB1-201ENST00000261693 C10orf91Q5T1B1 145 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 RAB11FIP2Q7L804 512 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 PLPP5Q8NEB5 264 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 OR56B1Q8NGI3 324 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 ZNF501Q96CX3 271 aaPredicted RBP17.06■□□□□ 0.32
SCARB1-201ENST00000261693 OR5B2Q96R09 309 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 ACKR4Q9NPB9 350 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 ANAPC10Q9UM13 185 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 DUX1O43812 170 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 LRP3O75074 770 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 MUC1P15941 1255 aaPredicted RBP17.06■□□□□ 0.32
SCARB1-201ENST00000261693 FPR2P25090 351 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 PJVKQ0ZLH3 352 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 RPL7L1Q6DKI1 246 aaKnown RBP17.06■□□□□ 0.32
SCARB1-201ENST00000261693 DHRS7BQ6IAN0 325 aaPredicted RBP17.06■□□□□ 0.32
SCARB1-201ENST00000261693 NUBPLQ8TB37 319 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 POC1BQ8TC44 478 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 C2CD4CQ8TF44 421 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 OCSTAMPQ9BR26 566 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 SLC26A1Q9H2B4 701 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 RHOFQ9HBH0 211 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 EML6Q6ZMW3 1958 aa17.06■□□□□ 0.32
SCARB1-201ENST00000261693 METTL12A8MUP2 240 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 SFTPDP35247 375 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 ACTBL2Q562R1 376 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 FAM69BQ5VUD6 431 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 SYT13Q7L8C5 426 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 TMPRSS9Q7Z410 1059 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 ANKRD37Q7Z713 158 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 SLC38A9Q8NBW4 561 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 OR10A2Q9H208 303 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 A0A1W2PNV4 684 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 SNAPINO95295 136 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 CSTBP04080 98 aaKnown RBP17.05■□□□□ 0.32
SCARB1-201ENST00000261693 SERPINA5P05154 406 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 DCDP81605 110 aaKnown RBP17.05■□□□□ 0.32
SCARB1-201ENST00000261693 SMAD4Q13485 552 aaKnown RBP17.05■□□□□ 0.32
SCARB1-201ENST00000261693 ZFP82Q8N141 532 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 SMRP1Q8NCR6 262 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 SLC5A7Q9GZV3 580 aa17.05■□□□□ 0.32
SCARB1-201ENST00000261693 KLF2Q9Y5W3 355 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-201ENST00000261693 HEXBP07686 556 aa17.04■□□□□ 0.32
SCARB1-201ENST00000261693 QDPRP09417 244 aa17.04■□□□□ 0.32
SCARB1-201ENST00000261693 NME2P22392 152 aa17.04■□□□□ 0.32
SCARB1-201ENST00000261693 RAB13P51153 203 aa17.04■□□□□ 0.32
SCARB1-201ENST00000261693 P2RY4P51582 365 aa17.04■□□□□ 0.32
SCARB1-201ENST00000261693 STK11Q15831 433 aa17.04■□□□□ 0.32
SCARB1-201ENST00000261693 RSPO4Q2I0M5 234 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms