RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TMEM244Q5VVB8 128 aa12.91□□□□□ -0.34
TRAFD1-201ENST00000257604 ALKBH2Q6NS38 261 aa12.91□□□□□ -0.34
TRAFD1-201ENST00000257604 ZNF704Q6ZNC4 412 aaPredicted RBP12.91□□□□□ -0.34
TRAFD1-201ENST00000257604 GTPBP8Q8N3Z3 284 aaPredicted RBP12.91□□□□□ -0.34
TRAFD1-201ENST00000257604 OR9K2Q8NGE7 335 aa12.91□□□□□ -0.34
TRAFD1-201ENST00000257604 RNF133Q8WVZ7 376 aa12.91□□□□□ -0.34
TRAFD1-201ENST00000257604 MAFIPQ8WZ33 124 aa12.91□□□□□ -0.34
TRAFD1-201ENST00000257604 PDCD10Q9BUL8 212 aa12.91□□□□□ -0.34
TRAFD1-201ENST00000257604 ZNF471Q9BX82 626 aaPredicted RBP12.91□□□□□ -0.34
TRAFD1-201ENST00000257604 APC2O95996 2303 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 ZNF878C9JN71 531 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 GPR31O00270 319 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 RAB40ALP0C0E4 278 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 CD59P13987 128 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 GNB3P16520 340 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 FAHP16930 419 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 DHODHQ02127 395 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 CDH26Q8IXH8 852 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 TMEM185AQ8NFB2 350 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 PAQR8Q8TEZ7 354 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 RAB40AQ8WXH6 277 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 PHYHIPQ92561 330 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 TAAR9Q96RI9 348 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 PIGQQ9BRB3 760 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 MRPL13Q9BYD1 178 aaKnown RBP12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 CALHM2Q9HA72 323 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 PCDHB16Q9NRJ7 776 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 HDGFL3Q9Y3E1 203 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 ADAMTS20P59510 1910 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 SLC17A2O00624 439 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 CD96P40200 585 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 CLDN15P56746 228 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 ZP4Q12836 540 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 OR10D3Q8NH80 312 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 M1APQ8TC57 530 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 CASTOR1Q8WTX7 329 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 ANGPTL4Q9BY76 406 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 CPAMD8Q8IZJ3 1885 aa12.9□□□□□ -0.34
TRAFD1-201ENST00000257604 GLSO94925 669 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 ACP1P24666 158 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 NTF4P34130 210 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 P2RY4P51582 365 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 RBMS2Q15434 407 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 OLFML2AQ68BL7 652 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 RHOUQ7L0Q8 258 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 SLC36A1Q7Z2H8 476 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 GALNTL5Q7Z4T8 443 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 CBLN2Q8IUK8 224 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 DEFB124Q8NES8 71 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 OR5M9Q8NGP3 310 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 ZBTB8AQ96BR9 441 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 NICN1Q9BSH3 213 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 TINAGL1Q9GZM7 467 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 SLC6A15Q9H2J7 730 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 CCDC187A0A096LP49 1063 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 TUBAL3A6NHL2 446 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 ARGFXA6NJG6 315 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 DNASE2O00115 360 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 ATG12O94817 140 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 AMY2AP04746 511 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 BDKRB2P30411 391 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 ZNF93P35789 620 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 FADS6Q8N9I5 356 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 SLC25A43Q8WUT9 341 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 SNRPGP15A8MWD9 76 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 CRTAPO75718 401 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 OR3A4PP47883 348 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 SNU13P55769 128 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 CDNFQ49AH0 187 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 AAED1Q7RTV5 226 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 ZNF546Q86UE3 836 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 PXT1Q8NFP0 134 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 BPIFCQ8NFQ6 507 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 OR5D14Q8NGL3 314 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 DEFB127Q9H1M4 99 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 POFUT1Q9H488 388 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 FANCFQ9NPI8 374 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 ZNF275Q9NSD4 429 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 FAM206AQ9NX38 181 aa12.89□□□□□ -0.35
TRAFD1-201ENST00000257604 XRCC3O43542 346 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 LCATP04180 440 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 RAB3AP20336 220 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 MAGEA5P43359 124 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 GMFBP60983 142 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 ZNF774Q6NX45 483 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 OR6X1Q8NH79 312 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 PRR13Q9NZ81 148 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 POLEQ07864 2286 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 OR6C65A6NJZ3 312 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 IGHMP01871 453 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 CSNK2A1P68400 391 aaPredicted RBP12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 SSPNQ14714 243 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 PDCD1Q15116 288 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 GLIPR1L1Q6UWM5 242 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 KCTD9Q7L273 389 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 OR1M1Q8NGA1 313 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 NAA11Q9BSU3 229 aaPredicted RBP12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 TMPRSS13Q9BYE2 586 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 ASF1BQ9NVP2 202 aa12.88□□□□□ -0.35
TRAFD1-201ENST00000257604 DHHO43323 396 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms