RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 FAM60AQ9NP50 221 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 SMCO4Q9NRQ5 59 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 M6PRP20645 277 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 AARDQ4LEZ3 155 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 D2HGDHQ8N465 521 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 OR2Y1Q8NGV0 311 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 ZFP92A6NM28 416 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 M0R296 226 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 LRP3O75074 770 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 CYC1P08574 325 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 PIGPP57054 158 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 FXNQ16595 210 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 TCTN1Q2MV58 587 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 ADGRG3Q86Y34 549 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 R4GN57 208 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 CSN1S1P47710 185 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 RPS16P62249 146 aaKnown RBP16.99■□□□□ 0.31
PTPRE-201ENST00000254667 OTPQ5XKR4 325 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 TSEN54Q7Z6J9 526 aaKnown RBP16.99■□□□□ 0.31
PTPRE-201ENST00000254667 C4orf45Q96LM5 186 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 TSPAN32Q96QS1 320 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 GNB4Q9HAV0 340 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 A0A1B0GTQ1 180 aa16.99■□□□□ 0.31
PTPRE-201ENST00000254667 RPL12P30050 165 aaKnown RBP16.99■□□□□ 0.31
PTPRE-201ENST00000254667 DHRS3O75911 302 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 OR10J4P0C629 311 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 RPS2P15880 293 aaKnown RBP16.98■□□□□ 0.31
PTPRE-201ENST00000254667 GPM6AP51674 278 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 ADIRFQ15847 76 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 WDR38Q5JTN6 314 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 HES3Q5TGS1 186 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 GALNT16Q8N428 558 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 AUNIPQ9H7T9 357 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 AK3Q9UIJ7 227 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 C20orf202A1L168 122 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 HOXB3P14651 431 aaPredicted RBP16.98■□□□□ 0.31
PTPRE-201ENST00000254667 MRM1Q6IN84 353 aaKnown RBP16.98■□□□□ 0.31
PTPRE-201ENST00000254667 SSX9Q7RTT3 188 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 OR4C16Q8NGL9 310 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 ADAT1Q9BUB4 502 aaKnown RBP16.98■□□□□ 0.31
PTPRE-201ENST00000254667 CYSLTR2Q9NS75 346 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 COL5A3P25940 1745 aaPredicted RBP16.98■□□□□ 0.31
PTPRE-201ENST00000254667 NPIPB8E9PQR5 432 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 SNRPNP63162 240 aaKnown RBP16.98■□□□□ 0.31
PTPRE-201ENST00000254667 TMEM182Q6ZP80 229 aaPredicted RBP16.98■□□□□ 0.31
PTPRE-201ENST00000254667 NUFIP2Q7Z417 695 aaKnown RBP16.98■□□□□ 0.31
PTPRE-201ENST00000254667 OR10D3Q8NH80 312 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 EXTL1Q92935 676 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 SUCNR1Q9BXA5 334 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 SLC25A32Q9H2D1 315 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 CLEC3BP05452 202 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 MGST1P10620 155 aaKnown RBP16.98■□□□□ 0.31
PTPRE-201ENST00000254667 DCTDP32321 178 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 TAGLN2P37802 199 aaKnown RBP16.98■□□□□ 0.31
PTPRE-201ENST00000254667 GNB1P62873 340 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 MCHR2Q969V1 340 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 BOLA1Q9Y3E2 137 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 KNL1Q8NG31 2342 aa16.98■□□□□ 0.31
PTPRE-201ENST00000254667 SPRY1O43609 319 aaPredicted RBP16.97■□□□□ 0.31
PTPRE-201ENST00000254667 IGHA2P01877 340 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 PDGFAP04085 211 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 SCN1AP35498 2009 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 CTF1Q16619 201 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 LRRC10Q5BKY1 277 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 DUSP15Q9H1R2 295 aaPredicted RBP16.97■□□□□ 0.31
PTPRE-201ENST00000254667 PLPP3O14495 311 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 SSSCA1O60232 199 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 CT62P0C5K7 136 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 TMEM211Q6ICI0 200 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 HIST2H3AQ71DI3 136 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 FYTTD1Q96QD9 318 aaKnown RBP16.97■□□□□ 0.31
PTPRE-201ENST00000254667 NEU3Q9UQ49 428 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 ARID1BQ8NFD5 2236 aaPredicted RBP16.97■□□□□ 0.31
PTPRE-201ENST00000254667 UBE2G1P62253 170 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 ACOT6Q3I5F7 207 aaPredicted RBP16.97■□□□□ 0.31
PTPRE-201ENST00000254667 ZNF768Q9H5H4 540 aaKnown RBP16.97■□□□□ 0.31
PTPRE-201ENST00000254667 GLRX2Q9NS18 164 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 OR6C68A6NDL8 312 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 TSTD3H0UI37 97 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 NDUFB3O43676 98 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 GLI4P10075 376 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 TGM1P22735 817 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 OR2B11Q5JQS5 317 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 CCDC190Q86UF4 302 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 FBXL14Q8N1E6 418 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 ZNF485Q8NCK3 441 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 ZNF75AQ96N20 296 aa16.97■□□□□ 0.31
PTPRE-201ENST00000254667 ACTR3CQ9C0K3 210 aaPredicted RBP16.97■□□□□ 0.31
PTPRE-201ENST00000254667 GPR31O00270 319 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 PPP1CAP62136 330 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 FMODQ06828 376 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 FAAP20Q6NZ36 180 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 SLC36A1Q7Z2H8 476 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 KDF1Q8NAX2 398 aaPredicted RBP16.96■□□□□ 0.31
PTPRE-201ENST00000254667 ADGRL4Q9HBW9 690 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 FER1L6Q2WGJ9 1857 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 ZNF705GA8MUZ8 300 aaPredicted RBP16.96■□□□□ 0.31
PTPRE-201ENST00000254667 UBE2G2P60604 165 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 GNB2P62879 340 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms