RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 SEMG1P04279 462 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 TNFRSF1AP19438 455 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 MAGEB1P43366 347 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF485Q8NCK3 441 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 AUNIPQ9H7T9 357 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 NSG2Q9Y328 171 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 LY75O60449 1722 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 IGLV3-16A0A075B6K0 115 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 OR5H14A6NHG9 310 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 M0QZ24 198 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 MBP02144 154 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 TGFBR1P36897 503 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 SRSF5Q13243 272 aaKnown RBP7.82□□□□□ -1.16
PTCD3-201ENST00000254630 TAF9Q16594 264 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 C12orf73Q69YU5 71 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 BTNL8Q6UX41 500 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 CDH26Q8IXH8 852 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 Q8IYB0 196 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 NPEPL1Q8NDH3 523 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 ADPRHL1Q8NDY3 354 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 OR2G2Q8NGZ5 317 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 GNPNAT1Q96EK6 184 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-201ENST00000254630 SLC35D1Q9NTN3 355 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 CACFD1Q9UGQ2 172 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 NUDT19A8MXV4 375 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 CHEK1O14757 476 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 OR4E1P0C645 316 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 SLC25A1P53007 311 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 SSBP1Q04837 148 aaKnown RBP7.82□□□□□ -1.16
PTCD3-201ENST00000254630 CALHM3Q86XJ0 350 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 OR5H6Q8NGV6 325 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 OR4C3Q8NH37 302 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 TMEM230Q96A57 120 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 TMEM272A0A1B0GTI8 110 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 A0A1B0GTL3 188 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 BMI1P35226 326 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 MDH2P40926 338 aaKnown RBP7.81□□□□□ -1.16
PTCD3-201ENST00000254630 KIR2DS2P43631 304 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 PCBP4P57723 403 aaKnown RBP7.81□□□□□ -1.16
PTCD3-201ENST00000254630 HAGHQ16775 308 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 FAM219BQ5XKK7 198 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 DRAM2Q6UX65 266 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 GLCCI1Q86VQ1 547 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 SFTPA1Q8IWL2 248 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF683Q8IZ20 524 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 OR4Q3Q8NH05 313 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 AMDHD2Q9Y303 409 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 DOCK5Q9H7D0 1870 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 PPIHO43447 177 aaKnown RBP7.81□□□□□ -1.16
PTCD3-201ENST00000254630 TMIGD3P0DMS9 266 aaPredicted RBP7.81□□□□□ -1.16
PTCD3-201ENST00000254630 TFF2Q03403 129 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 ABI3BPQ7Z7G0 1075 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 SKA3Q8IX90 412 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 MARCH1Q8TCQ1 289 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 MCHR2Q969V1 340 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 POM121L2Q96KW2 1035 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 FLVCR2Q9UPI3 526 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF724A8MTY0 619 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 CLDN20P56880 219 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 SLC25A35Q3KQZ1 300 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 FAM122CQ6P4D5 195 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 CARFQ8N187 725 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 LINC01555Q8NAE3 123 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 SLC39A7Q92504 469 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 C2orf50Q96LR7 162 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 LAMP3Q9UQV4 416 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 AMMECR1Q9Y4X0 333 aaPredicted RBP7.81□□□□□ -1.16
PTCD3-201ENST00000254630 CYTIPO60759 359 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 NKX2-2O95096 273 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 TOR2AQ5JU69 321 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 NECAP1Q8NC96 275 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 EDARADDQ8WWZ3 215 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 SBF2Q86WG5 1849 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 SH2D7A6NKC9 451 aaPredicted RBP7.81□□□□□ -1.16
PTCD3-201ENST00000254630 XRCC3O43542 346 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 CTSVO60911 334 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 JTBO76095 146 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 Q56UQ5 140 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 ACER2Q5QJU3 275 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 LYPD8Q6UX82 237 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 PRSS41Q7RTY9 318 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 OR2W3Q7Z3T1 314 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 ARHGEF39Q8N4T4 335 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 OR10D3Q8NH80 312 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 COX14Q96I36 57 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 GNRHR2Q96P88 292 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 TAAR3PQ9P1P4 343 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 V9GYS6 101 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 ASPDHA6ND91 283 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 CD3DP04234 171 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 CD1EP15812 388 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 RPL12P30050 165 aaKnown RBP7.81□□□□□ -1.16
PTCD3-201ENST00000254630 VMA21Q3ZAQ7 101 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF787Q6DD87 383 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 RPL7L1Q6DKI1 246 aaKnown RBP7.81□□□□□ -1.16
PTCD3-201ENST00000254630 ASB10Q8WXI3 467 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 TM4SF19Q96DZ7 209 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 OCIAD1Q9NX40 245 aa7.81□□□□□ -1.16
PTCD3-201ENST00000254630 UBE2L5PA0A1B0GUS4 154 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 OR5H15A6NDH6 313 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms