RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 MRPL21Q7Z2W9 205 aaKnown RBP6.89□□□□□ -1.31
USP29-201ENST00000254181 ZNF101Q8IZC7 436 aa6.89□□□□□ -1.31
USP29-201ENST00000254181 LFNGQ8NES3 379 aa6.89□□□□□ -1.31
USP29-201ENST00000254181 SPSB1Q96BD6 273 aa6.89□□□□□ -1.31
USP29-201ENST00000254181 LOXL4Q96JB6 756 aa6.89□□□□□ -1.31
USP29-201ENST00000254181 FOXN4Q96NZ1 517 aa6.89□□□□□ -1.31
USP29-201ENST00000254181 STRADBQ9C0K7 418 aa6.89□□□□□ -1.31
USP29-201ENST00000254181 RAB18Q9NP72 206 aa6.89□□□□□ -1.31
USP29-201ENST00000254181 TMEM100Q9NV29 134 aa6.89□□□□□ -1.31
USP29-201ENST00000254181 VAX2Q9UIW0 290 aa6.89□□□□□ -1.31
USP29-201ENST00000254181 FUT9Q9Y231 359 aa6.89□□□□□ -1.31
USP29-201ENST00000254181 POLR3KQ9Y2Y1 108 aaPredicted RBP6.89□□□□□ -1.31
USP29-201ENST00000254181 IGKV6D-41A0A0C4DH26 115 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 SHISA8B8ZZ34 492 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 K7EP13 123 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 B3GAT3O94766 335 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 SLC2A10O95528 541 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 FGF1P05230 155 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 CD27P26842 260 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 OTX2P32243 289 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 ERVS71-1P61550 626 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 ZNF92Q03936 586 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 RING1Q06587 406 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 ST3GAL3Q11203 375 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 PPP1R1AQ13522 171 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 ADIRFQ15847 76 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 ELOA3BQ3SY89 546 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 LY6G6FQ5SQ64 297 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 LINC00471Q8N535 108 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 ELOA3Q8NG57 546 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 OR52L2PQ8NGH6 319 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 TMEM186Q96B77 213 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 SMIM8Q96KF7 97 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 CMKLR1Q99788 373 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 TNS2Q63HR2 1409 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 H7C417 338 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 P2RX6O15547 441 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 TRAF3IP2O43734 574 aaPredicted RBP6.88□□□□□ -1.31
USP29-201ENST00000254181 C1QL1O75973 258 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 RCBTB2O95199 551 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 CD8AP01732 235 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 PSG1P11464 419 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 GLB1P16278 677 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 HTR1FP30939 366 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 FCGR2CP31995 323 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 OR3A2P47893 321 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 SLC35A1P78382 337 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 COL10A1Q03692 680 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 HSPB3Q12988 150 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 SHBQ15464 509 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 CT83Q5H943 113 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 DNM1P34Q6PK57 102 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 LYG2Q86SG7 212 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 TMEM106AQ96A25 262 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 TMEM19Q96HH6 336 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 ZNF587Q96SQ5 575 aaPredicted RBP6.88□□□□□ -1.31
USP29-201ENST00000254181 FAM103A1Q9BTL3 118 aaKnown RBP6.88□□□□□ -1.31
USP29-201ENST00000254181 SCNM1Q9BWG6 230 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 TMEM134Q9H6X4 195 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 PLEKHA1Q9HB21 404 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 SIDT1Q9NXL6 827 aaKnown RBP6.88□□□□□ -1.31
USP29-201ENST00000254181 MTFP1Q9UDX5 166 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 ZNF107Q9UII5 783 aaPredicted RBP6.88□□□□□ -1.31
USP29-201ENST00000254181 ADAM29Q9UKF5 820 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 UBE2J1Q9Y385 318 aaPredicted RBP6.88□□□□□ -1.31
USP29-201ENST00000254181 WSB1Q9Y6I7 421 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 TAF1P21675 1872 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 ZNF860A6NHJ4 632 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 TAAR5O14804 337 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 SLC25A14O95258 325 aaPredicted RBP6.88□□□□□ -1.31
USP29-201ENST00000254181 ZIC2O95409 532 aaPredicted RBP6.88□□□□□ -1.31
USP29-201ENST00000254181 IGSF6O95976 241 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 CST4P01036 141 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 GYPBP06028 91 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 MMP9P14780 707 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 ZNF20P17024 532 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 HYAL1Q12794 435 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 DOK7Q18PE1 504 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 FAM220AQ7Z4H9 259 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 TMEM123Q8N131 208 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 OR4K15Q8NH41 348 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 SEH1LQ96EE3 360 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 MACROD1Q9BQ69 325 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 SLC46A2Q9BY10 475 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 RRAGCQ9HB90 399 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 CRLS1Q9UJA2 301 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 TBX21Q9UL17 535 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 LAMTOR2Q9Y2Q5 125 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 MTCH2Q9Y6C9 303 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 RIMBP3Q9UFD9 1639 aa6.88□□□□□ -1.31
USP29-201ENST00000254181 MEGF6O75095 1541 aa6.87□□□□□ -1.31
USP29-201ENST00000254181 SAP18O00422 153 aaKnown RBP6.87□□□□□ -1.31
USP29-201ENST00000254181 SOX1O00570 391 aaPredicted RBP6.87□□□□□ -1.31
USP29-201ENST00000254181 CXCR1P25024 350 aa6.87□□□□□ -1.31
USP29-201ENST00000254181 IMPA1P29218 277 aa6.87□□□□□ -1.31
USP29-201ENST00000254181 MANFP55145 182 aaKnown RBP6.87□□□□□ -1.31
USP29-201ENST00000254181 SYPL1Q16563 259 aa6.87□□□□□ -1.31
USP29-201ENST00000254181 TSEN54Q7Z6J9 526 aaKnown RBP6.87□□□□□ -1.31
USP29-201ENST00000254181 ZNF761Q86XN6 746 aaPredicted RBP6.87□□□□□ -1.31
USP29-201ENST00000254181 OR6T1Q8NGN1 323 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms