RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 PRSS33Q8NF86 280 aa15.03■□□□□ -0
FOXA1-201ENST00000250448 HS3ST3B1Q9Y662 390 aa15.03■□□□□ -0
FOXA1-201ENST00000250448 TMEM269A0A1B0GVZ9 245 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 DBX1A6NMT0 343 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 PRR33A8MZF0 331 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 C9orf172C9J069 976 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 F8W036 122 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 HOXA1P49639 335 aaPredicted RBP15.02■□□□□ -0
FOXA1-201ENST00000250448 BLOC1S1P78537 153 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 PCOLCEQ15113 449 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 PLEKHN1Q494U1 663 aaPredicted RBP15.02■□□□□ -0
FOXA1-201ENST00000250448 HES3Q5TGS1 186 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 SLC30A7Q8NEW0 376 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 WDR54Q9H977 334 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 FN3KRPQ9HA64 309 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 TMEM100Q9NV29 134 aa15.02■□□□□ -0
FOXA1-201ENST00000250448 CARHSP1Q9Y2V2 147 aaKnown RBP15.02■□□□□ -0
FOXA1-201ENST00000250448 MED12Q93074 2177 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 TRAV20A0A0B4J274 112 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 C13orf42A0A1B0GVH6 325 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 ALG1L2C9J202 215 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 MT-CO3P00414 261 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 CD79AP11912 226 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 TCN2P20062 427 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 RPL35P42766 123 aaKnown RBP15.02□□□□□ -0.01
FOXA1-201ENST00000250448 AKR1D1P51857 326 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 C10orf91Q5T1B1 145 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 DHRS7BQ6IAN0 325 aaPredicted RBP15.02□□□□□ -0.01
FOXA1-201ENST00000250448 SLC26A10Q8NG04 563 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 ST7LQ8TDW4 575 aa15.02□□□□□ -0.01
FOXA1-201ENST00000250448 A0A1W2PQD3 144 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 A8MVM7 634 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 IFNA6P05013 189 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 BAP18Q8IXM2 172 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 SPAG16Q8N0X2 631 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 DEFB124Q8NES8 71 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 SELENOIQ9C0D9 397 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 OR11A1Q9GZK7 315 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 C19orf25Q9UFG5 118 aaPredicted RBP15.01□□□□□ -0.01
FOXA1-201ENST00000250448 TRBV6-7A0A0A0MS04 114 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 AHSA1O95433 338 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 BPNT1O95861 308 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 GNB3P16520 340 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 TBPP20226 339 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 HSD11B1P28845 292 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 PNLIPRP2P54317 469 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 TAS2R31P59538 309 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 NAAAQ02083 359 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 FMODQ06828 376 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 PNLIPRP3Q17RR3 467 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 OR52N4Q8NGI2 321 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 ELP5Q8TE02 316 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 FGGYQ96C11 551 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 NMES1Q9C002 83 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 PADI1Q9ULC6 663 aa15.01□□□□□ -0.01
FOXA1-201ENST00000250448 A0A0B4J2A0 478 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 NUDT19A8MXV4 375 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 SSX5O60225 188 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 OTX2P32243 289 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 QRFPP83859 136 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 SRSF3P84103 164 aaKnown RBP15□□□□□ -0.01
FOXA1-201ENST00000250448 RELQ04864 619 aaPredicted RBP15□□□□□ -0.01
FOXA1-201ENST00000250448 AIMP2Q13155 320 aaKnown RBP15□□□□□ -0.01
FOXA1-201ENST00000250448 TRIP6Q15654 476 aaKnown RBP15□□□□□ -0.01
FOXA1-201ENST00000250448 H3F3CQ6NXT2 135 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 OR2Y1Q8NGV0 311 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 MARCH1Q8TCQ1 289 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 RNF141Q8WVD5 230 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 WNT2BQ93097 391 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 CNTNAP3BQ96NU0 1288 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 DEFB126Q9BYW3 111 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 SHPKQ9UHJ6 478 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 PMP2P02689 132 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 VSIG8P0DPA2 414 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 HLA-DOBP13765 273 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 GNALP38405 381 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 CX3CR1P49238 355 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 NKAPLQ5M9Q1 402 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 TMPPEQ6ZT21 453 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 OR4A4PQ8NGN8 299 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 CT55Q8WUE5 264 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 TMED6Q8WW62 240 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 ZNF160Q9HCG1 818 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 CYTL1Q9NRR1 136 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 MYOTQ9UBF9 498 aa15□□□□□ -0.01
FOXA1-201ENST00000250448 NXT1Q9UKK6 140 aaKnown RBP15□□□□□ -0.01
FOXA1-201ENST00000250448 PTPRZ1P23471 2315 aaPredicted RBP15□□□□□ -0.01
FOXA1-201ENST00000250448 IGHV1-45A0A0A0MS14 117 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 SPAARA0A1B0GVQ0 90 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 SCGNO76038 276 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 H2BFMP0C1H6 154 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 COX6A1P12074 109 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 CDCP2Q5VXM1 449 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 DNM1P34Q6PK57 102 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 C6orf15Q6UXA7 325 aaPredicted RBP14.99□□□□□ -0.01
FOXA1-201ENST00000250448 RTN4RL2Q86UN3 420 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 HOGA1Q86XE5 327 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 KDM8Q8N371 416 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 SLC22A24Q8N4F4 322 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 ZSCAN4Q8NAM6 433 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms