RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 NOSIPQ9Y314 301 aaKnown RBP6.78□□□□□ -1.32
RIF1-201ENST00000243326 CACNA1AO00555 2505 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 PRAMEF25A6NGN4 478 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 UPK1AO00322 258 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 PATE4P0C8F1 98 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 PRAMEF5Q5TYX0 476 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 PRAMEF6Q5VXH4 476 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 ADPRHL1Q8NDY3 354 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 ERGIC1Q969X5 290 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 STRADBQ9C0K7 418 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 HNRNPA3P51991 378 aaKnown RBP6.78□□□□□ -1.32
RIF1-201ENST00000243326 PTTG1IPP53801 180 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 SLC17A1Q14916 467 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 DEFB127Q9H1M4 99 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 CBY1Q9Y3M2 126 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 MEIKINA0A087WXM9 373 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 IGHV3-43A0A0B4J1X8 118 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 OR7C2O60412 319 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 GLSO94925 669 aaPredicted RBP6.78□□□□□ -1.32
RIF1-201ENST00000243326 IGHV3-43DP0DP04 118 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 EFNB2P52799 333 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 B2MP61769 119 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 ZNF718Q3SXZ3 478 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 ACSM6Q6P461 480 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 NMES1Q9C002 83 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 CLEC5AQ9NY25 188 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 SLCO1B1Q9Y6L6 691 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 BSGP35613 385 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 DHRS2Q13268 280 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 DND1Q8IYX4 353 aaKnown RBP6.78□□□□□ -1.32
RIF1-201ENST00000243326 TREM2Q9NZC2 230 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 MIOXQ9UGB7 285 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 IFITM2Q01629 132 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 C2orf50Q96LR7 162 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 SCPEP1Q9HB40 452 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 TNRC6CQ9HCJ0 1690 aaKnown RBP6.78□□□□□ -1.32
RIF1-201ENST00000243326 OR5H15A6NDH6 313 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 RPL27P61353 136 aaKnown RBP6.78□□□□□ -1.32
RIF1-201ENST00000243326 GUCA2BQ16661 112 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 OPN5Q6U736 354 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 ZNF66Q6ZN08 573 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 C17orf112F2Z3M2 114 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 OR52N4Q8NGI2 321 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 SLC22A7Q9Y694 548 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 CSPG4Q6UVK1 2322 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 NSG1A0A0A6YYJ2 146 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 C17orf113A0A1B0GUU1 675 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 SUMO1P63165 101 aaKnown RBP6.78□□□□□ -1.32
RIF1-201ENST00000243326 SLC38A9Q8NBW4 561 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 OR5B3Q8NH48 314 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 FAAP24Q9BTP7 215 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 LDLRAD4O15165 306 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 ST8SIA3O43173 380 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 OR2F1Q13607 317 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 FGF20Q9NP95 211 aaPredicted RBP6.78□□□□□ -1.32
RIF1-201ENST00000243326 RAB29O14966 203 aa6.77□□□□□ -1.32
RIF1-201ENST00000243326 FOXL2P58012 376 aa6.77□□□□□ -1.32
RIF1-201ENST00000243326 PPP2CBP62714 309 aa6.77□□□□□ -1.32
RIF1-201ENST00000243326 PPP2CAP67775 309 aa6.77□□□□□ -1.32
RIF1-201ENST00000243326 OBP2AQ9NY56 170 aa6.77□□□□□ -1.32
RIF1-201ENST00000243326 F11P03951 625 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 SPNS3Q6ZMD2 512 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 SLC17A4Q9Y2C5 497 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 ZNF17P17021 662 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 GSK3AP49840 483 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 RPP30P78346 268 aaKnown RBP6.77□□□□□ -1.33
RIF1-201ENST00000243326 SMIM19Q96E16 107 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 DUS3LQ96G46 650 aaKnown RBP6.77□□□□□ -1.33
RIF1-201ENST00000243326 RPS15P62841 145 aaKnown RBP6.77□□□□□ -1.33
RIF1-201ENST00000243326 RIPPLY1Q0D2K3 151 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 SERTAD2Q14140 314 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 PLA1AQ53H76 456 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 DCAF12L2Q5VW00 463 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 C11orf87Q6NUJ2 197 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 ZNRF4Q8WWF5 429 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 GPHA2Q96T91 129 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 ADAMTS5Q9UNA0 930 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 ITGB4P16144 1822 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 OR5K4A6NMS3 321 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 CHEK1O14757 476 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 NDUFB7P17568 137 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 C12orf73Q69YU5 71 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 CATSPERDQ86XM0 798 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 GCNT2Q8N0V5 402 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 SLC43A2Q8N370 569 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 RTN4IP1Q8WWV3 396 aaPredicted RBP6.77□□□□□ -1.33
RIF1-201ENST00000243326 MSI2Q96DH6 328 aaKnown RBP6.77□□□□□ -1.33
RIF1-201ENST00000243326 B9D1Q9UPM9 204 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 LRP12Q9Y561 859 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 NDUFB6O95139 128 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 CFDP00746 253 aaPredicted RBP6.77□□□□□ -1.33
RIF1-201ENST00000243326 CLEC3BP05452 202 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 ETV6P41212 452 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 ETFDHQ16134 617 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 BTNL3Q6UXE8 466 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 BLNKQ8WV28 456 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 ZMIZ1Q9ULJ6 1067 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 SLC45A1Q9Y2W3 748 aa6.77□□□□□ -1.33
RIF1-201ENST00000243326 STRAPQ9Y3F4 350 aaKnown RBP6.77□□□□□ -1.33
RIF1-201ENST00000243326 BMPR1BO00238 502 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms