RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 RPS4Y2Q8TD47 263 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 CNTD2Q9H8S5 307 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 LANCL2Q9NS86 450 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 OR14J1Q9UGF5 321 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 TBX21Q9UL17 535 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 SLC25A1P53007 311 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 RPS23P62266 143 aaKnown RBP12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 CYCSP99999 105 aaKnown RBP12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 HPSE2Q8WWQ2 592 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 SNX22Q96L94 193 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 NICN1Q9BSH3 213 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 IGFLR1Q9H665 355 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 CELA2BP08218 269 aaPredicted RBP12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 SLC2A1P11166 492 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 SERPINA2P20848 420 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 EGR3Q06889 387 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 UBE2V2Q15819 145 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 ETFRF1Q6IPR1 90 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 PAQR4Q8N4S7 273 aaPredicted RBP12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 EXD3Q8N9H8 876 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 OR52N4Q8NGI2 321 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 OR4K15Q8NH41 348 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 FLVCR1-AS1Q8TAF5 88 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 SPPL3Q8TCT6 385 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 SMIM8Q96KF7 97 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 RTN4RQ9BZR6 473 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 HHLA2Q9UM44 414 aa12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 TMEM184BQ9Y519 407 aaPredicted RBP12.61□□□□□ -0.39
PCDHB3-201ENST00000231130 EFSO43281 561 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST1H2BKO60814 126 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST1H2BJP06899 126 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 GLI4P10075 376 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 CD37P11049 281 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 RNH1P13489 461 aaKnown RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 MYOGP15173 224 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST1H2BOP23527 126 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 IL2RGP31785 369 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST1H2BBP33778 126 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 ARRB1P49407 418 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 RAB38P57729 211 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST1H2BDP58876 126 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST1H2BCP62807 126 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST2H2BEQ16778 126 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 PTCRAQ6ISU1 281 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 KCTD18Q6PI47 426 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 ATG4DQ86TL0 474 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 GPBAR1Q8TDU6 330 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 ZNF296Q8WUU4 475 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST1H2BHQ93079 126 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 MRGPRFQ96AM1 343 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST1H2BNQ99877 126 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HIST1H2BMQ99879 126 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 ST6GALNAC5Q9BVH7 336 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 DDA1Q9BW61 102 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 UBQLN4Q9NRR5 601 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 MRPL22Q9NWU5 206 aaKnown RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 LSM5Q9Y4Y9 91 aaKnown RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 TGIF2-C20orf24A0A0A6YYL0 155 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 ZNF264O43296 627 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 RAMP1O60894 148 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 MPIG6BO95866 241 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 OPN1LWP04000 364 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 COTL1Q14019 142 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 ZNF141Q15928 474 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 ZNF776Q68DI1 518 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 AWAT2Q6E213 333 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 ARMC6Q6NXE6 501 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 DCXRQ7Z4W1 244 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 OR5D18Q8NGL1 313 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 NXF5Q9H1B4 397 aaKnown RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 RIMS4Q9H426 269 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 URB1O60287 2271 aaKnown RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 A0A1W2PP11 408 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 JMJD7P0C870 316 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 ZNF823P16415 610 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 PPICP45877 212 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 LBHQ53QV2 105 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 LANCL3Q6ZV70 420 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 BAHD1Q8TBE0 780 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 MESP1Q9BRJ9 268 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 FAM212BQ9NTI7 297 aaPredicted RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 CBLN4Q9NTU7 201 aa12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 YBX2Q9Y2T7 364 aaKnown RBP12.6□□□□□ -0.39
PCDHB3-201ENST00000231130 WIPF3A6NGB9 483 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 A6NNC1 897 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 GEMIN2O14893 280 aaKnown RBP12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 APODP05090 189 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 ASAH2BP0C7U1 165 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 PNMTP11086 282 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 FGF7P21781 194 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 CHATP28329 748 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 SLC26A5P58743 744 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 NOGQ13253 232 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 ARFRP1Q13795 201 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 TIPARPQ7Z3E1 657 aaKnown RBP12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 THNSL2Q86YJ6 484 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 HSD17B11Q8NBQ5 300 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms