RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 ARID1AO14497 2285 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 RAMP1O60894 148 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 PMP2P02689 132 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 KLK2P20151 261 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 RAB6AP20340 208 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 HSD11B1P28845 292 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 SFTPDP35247 375 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 ZNF93P35789 620 aaPredicted RBP13.53□□□□□ -0.24
TGFB1-201ENST00000221930 RGS19P49795 217 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 CLRN1P58418 232 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 KCTD9Q7L273 389 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 ABHD12BQ7Z5M8 362 aaPredicted RBP13.53□□□□□ -0.24
TGFB1-201ENST00000221930 TMEM104Q8NE00 496 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 SVIPQ8NHG7 77 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 MRPL13Q9BYD1 178 aaKnown RBP13.53□□□□□ -0.24
TGFB1-201ENST00000221930 TGIF2Q9GZN2 237 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 METTL7AQ9H8H3 244 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 ALKBH4Q9NXW9 302 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 ZNF319Q9P2F9 582 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 ASH2LQ9UBL3 628 aa13.53□□□□□ -0.24
TGFB1-201ENST00000221930 C9orf170A2RU37 121 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 RER1O15258 196 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 ZNF208O43345 1280 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 CD8AP01732 235 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 ZBTB25P24278 435 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 LUMP51884 338 aaPredicted RBP13.52□□□□□ -0.24
TGFB1-201ENST00000221930 RAB5BP61020 215 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 MEF2DQ14814 521 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 SVBPQ8N300 66 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 POC1BQ8TC44 478 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 OR5B2Q96R09 309 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 DUSP23Q9BVJ7 150 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 ASPMQ8IZT6 3477 aa13.52□□□□□ -0.24
TGFB1-201ENST00000221930 EXPH5Q8NEV8 1989 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 CACNA1EQ15878 2313 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 A0A1W2PP11 408 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 ERCC1P07992 297 aaPredicted RBP13.52□□□□□ -0.25
TGFB1-201ENST00000221930 NDUFB7P17568 137 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 PLPPR5Q32ZL2 321 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 C11orf87Q6NUJ2 197 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 SLC25A42Q86VD7 318 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 UEVLDQ8IX04 471 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 AKR7LQ8NHP1 331 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 AKIRIN1Q9H9L7 192 aaPredicted RBP13.52□□□□□ -0.25
TGFB1-201ENST00000221930 FN3KRPQ9HA64 309 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 CHMP1AQ9HD42 196 aaPredicted RBP13.52□□□□□ -0.25
TGFB1-201ENST00000221930 COMMD9Q9P000 198 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 SRPK3Q9UPE1 567 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 SDK2Q58EX2 2172 aa13.52□□□□□ -0.25
TGFB1-201ENST00000221930 SCRG1O75711 98 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 JMJD6Q6NYC1 403 aaPredicted RBP13.51□□□□□ -0.25
TGFB1-201ENST00000221930 LYG2Q86SG7 212 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 SPAG16Q8N0X2 631 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 ZFP82Q8N141 532 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 RNASE11Q8TAA1 199 aaKnown RBP13.51□□□□□ -0.25
TGFB1-201ENST00000221930 NUBPLQ8TB37 319 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 C14orf144Q96I85 54 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 FAM71F1Q96KD3 344 aaPredicted RBP13.51□□□□□ -0.25
TGFB1-201ENST00000221930 VRK1Q99986 396 aaPredicted RBP13.51□□□□□ -0.25
TGFB1-201ENST00000221930 BANF2Q9H503 90 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 OPA3Q9H6K4 179 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 MEX3AA1L020 520 aaKnown RBP13.51□□□□□ -0.25
TGFB1-201ENST00000221930 EEF1E1-BLOC1S5C9J1V9 151 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 FOLR2P14207 255 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 MGMTP16455 207 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 ZNF20P17024 532 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 AGTR1P30556 359 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 EMP2P54851 167 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 CASP6P55212 293 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 LCN10Q6JVE6 187 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 PUSL1Q8N0Z8 303 aaKnown RBP13.51□□□□□ -0.25
TGFB1-201ENST00000221930 BOLLQ8N9W6 283 aaKnown RBP13.51□□□□□ -0.25
TGFB1-201ENST00000221930 BPIFCQ8NFQ6 507 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 OR10K1Q8NGX5 313 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 EDAQ92838 391 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 CDX2Q99626 313 aaPredicted RBP13.51□□□□□ -0.25
TGFB1-201ENST00000221930 SSX3Q99909 188 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 MYOZ1Q9NP98 299 aaPredicted RBP13.51□□□□□ -0.25
TGFB1-201ENST00000221930 ZNF107Q9UII5 783 aaPredicted RBP13.51□□□□□ -0.25
TGFB1-201ENST00000221930 TNFSF18Q9UNG2 199 aa13.51□□□□□ -0.25
TGFB1-201ENST00000221930 NPIPB13A6NJU9 1138 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 NPIPB4C9JG80 1138 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 BPNT1O95861 308 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 IFNA6P05013 189 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 PGA4P0DJD7 388 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 PGA3P0DJD8 388 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 GUCA2BQ16661 112 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 THEM4Q5T1C6 240 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 PHF19Q5T6S3 580 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 GLIPR1L1Q6UWM5 242 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 WDR5BQ86VZ2 330 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 OR10R2Q8NGX6 335 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 OR2AJ1Q8NGZ0 328 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 ASB13Q8WXK3 278 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 ZNF471Q9BX82 626 aaPredicted RBP13.5□□□□□ -0.25
TGFB1-201ENST00000221930 GPR84Q9NQS5 396 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 ZFP57Q9NU63 452 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 SLC2A8Q9NY64 477 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 MYOTQ9UBF9 498 aa13.5□□□□□ -0.25
TGFB1-201ENST00000221930 SIT1Q9Y3P8 196 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms