RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SNRPGP15A8MWD9 76 aa25.91■■□□□ 1.74
PABPN1-201ENST00000216727 PYCARD-AS1I3L0S3 204 aa25.91■■□□□ 1.74
PABPN1-201ENST00000216727 RAB3DO95716 219 aa25.91■■□□□ 1.74
PABPN1-201ENST00000216727 IGHV3-9P01782 118 aa25.91■■□□□ 1.74
PABPN1-201ENST00000216727 NAT2P11245 290 aa25.91■■□□□ 1.74
PABPN1-201ENST00000216727 REEP6Q96HR9 211 aa25.91■■□□□ 1.74
PABPN1-201ENST00000216727 CALHM2Q9HA72 323 aa25.91■■□□□ 1.74
PABPN1-201ENST00000216727 GPN1Q9HCN4 374 aaPredicted RBP25.91■■□□□ 1.74
PABPN1-201ENST00000216727 ATPIF1Q9UII2 106 aa25.91■■□□□ 1.74
PABPN1-201ENST00000216727 LIPGQ9Y5X9 500 aa25.91■■□□□ 1.74
PABPN1-201ENST00000216727 FABP7O15540 132 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 LCATP04180 440 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 CPN1P15169 458 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 ANXA7P20073 488 aaKnown RBP25.9■■□□□ 1.74
PABPN1-201ENST00000216727 PTGFRP43088 359 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 SF3B4Q15427 424 aaKnown RBP eCLIP25.9■■□□□ 1.743e-9■■■■□ 20.9
PABPN1-201ENST00000216727 PLXDC2Q6UX71 529 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 FJX1Q86VR8 437 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 PRSS33Q8NF86 280 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 TMEM59Q9BXS4 323 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 RGCCQ9H4X1 137 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 ZNF736B4DX44 427 aaPredicted RBP25.9■■□□□ 1.74
PABPN1-201ENST00000216727 ZNF587BE7ETH6 402 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 MPIG6BO95866 241 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 TNFSF10P50591 281 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 ZNF584Q8IVC4 421 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 ZDHHC11Q9H8X9 412 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 ING4Q9UNL4 249 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 BOLA1Q9Y3E2 137 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 NPTNQ9Y639 398 aa25.9■■□□□ 1.74
PABPN1-201ENST00000216727 DNAJC13O75165 2243 aa25.89■■□□□ 1.74
PABPN1-201ENST00000216727 SMLR1H3BR10 107 aa25.89■■□□□ 1.74
PABPN1-201ENST00000216727 ARF1P84077 181 aaKnown RBP25.89■■□□□ 1.74
PABPN1-201ENST00000216727 CHMP1BQ7LBR1 199 aa25.89■■□□□ 1.74
PABPN1-201ENST00000216727 NICN1Q9BSH3 213 aa25.89■■□□□ 1.74
PABPN1-201ENST00000216727 SELENOIQ9C0D9 397 aa25.89■■□□□ 1.74
PABPN1-201ENST00000216727 CST11Q9H112 138 aa25.89■■□□□ 1.74
PABPN1-201ENST00000216727 RIPPLY1Q0D2K3 151 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 ZNF626Q68DY1 528 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 OR2AE1Q8NHA4 323 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 SEC22CQ9BRL7 303 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 PLSCR3Q9NRY6 295 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 PTTG3PQ9NZH4 202 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 ITGB1BP2Q9UKP3 347 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 A0A0A6YYD4 124 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 FCER2P06734 321 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 ACKR3P25106 362 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 RNFT1Q5M7Z0 435 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 SLC36A1Q7Z2H8 476 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 TRAPPC6BQ86SZ2 158 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 APH1AQ96BI3 265 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 TMEM246Q9BRR3 403 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 URM1Q9BTM9 101 aaKnown RBP25.88■■□□□ 1.73
PABPN1-201ENST00000216727 DEFB127Q9H1M4 99 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 LDAHQ9H6V9 325 aa25.88■■□□□ 1.73
PABPN1-201ENST00000216727 RANBP3Q9H6Z4 567 aaPredicted RBP25.88■■□□□ 1.73
PABPN1-201ENST00000216727 TRGV5A0A0B4J1U4 118 aa25.87■■□□□ 1.73
PABPN1-201ENST00000216727 CREBL2O60519 120 aaPredicted RBP25.87■■□□□ 1.73
PABPN1-201ENST00000216727 GSTP1P09211 210 aaKnown RBP25.87■■□□□ 1.73
PABPN1-201ENST00000216727 GNB3P16520 340 aa25.87■■□□□ 1.73
PABPN1-201ENST00000216727 ZP1P60852 638 aa25.87■■□□□ 1.73
PABPN1-201ENST00000216727 SRSF6Q13247 344 aaKnown RBP25.87■■□□□ 1.73
PABPN1-201ENST00000216727 RSPO4Q2I0M5 234 aaPredicted RBP25.87■■□□□ 1.73
PABPN1-201ENST00000216727 PABPC1L2AQ5JQF8 200 aa25.87■■□□□ 1.73
PABPN1-201ENST00000216727 SLC25A21Q9BQT8 299 aaPredicted RBP25.87■■□□□ 1.73
PABPN1-201ENST00000216727 MEF2DQ14814 521 aa25.87■■□□□ 1.73
PABPN1-201ENST00000216727 OR56B1Q8NGI3 324 aa25.87■■□□□ 1.73
PABPN1-201ENST00000216727 NPRL2Q8WTW4 380 aa25.87■■□□□ 1.73
PABPN1-201ENST00000216727 SPSB1Q96BD6 273 aa25.87■■□□□ 1.73
PABPN1-201ENST00000216727 WDYHV1Q96HA8 205 aa25.87■■□□□ 1.73
PABPN1-201ENST00000216727 CRTAPO75718 401 aaPredicted RBP25.86■■□□□ 1.73
PABPN1-201ENST00000216727 ZNF735P0CB33 412 aa25.86■■□□□ 1.73
PABPN1-201ENST00000216727 C3AR1Q16581 482 aa25.86■■□□□ 1.73
PABPN1-201ENST00000216727 MCEMP1Q8IX19 187 aa25.86■■□□□ 1.73
PABPN1-201ENST00000216727 FAM89BQ8N5H3 189 aa25.86■■□□□ 1.73
PABPN1-201ENST00000216727 SPICQ8N5J4 248 aa25.86■■□□□ 1.73
PABPN1-201ENST00000216727 TINAGL1Q9GZM7 467 aaPredicted RBP25.86■■□□□ 1.73
PABPN1-201ENST00000216727 BANF2Q9H503 90 aa25.86■■□□□ 1.73
PABPN1-201ENST00000216727 UPB1Q9UBR1 384 aa25.86■■□□□ 1.73
PABPN1-201ENST00000216727 FCGR2AP12318 317 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 SLC22A6Q4U2R8 563 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 IGFL2Q6UWQ7 119 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 TMPRSS7Q7RTY8 843 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 ZNF100Q8IYN0 542 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 ASCC1Q8N9N2 400 aaKnown RBP25.85■■□□□ 1.73
PABPN1-201ENST00000216727 RAB3CQ96E17 227 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 ALX4Q9H161 411 aaPredicted RBP25.85■■□□□ 1.73
PABPN1-201ENST00000216727 PTPRBP23467 1997 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 M0QYG6 137 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 VSIG10L2P0DP72 767 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 ZNF24P17028 368 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 RPS27AP62979 156 aaKnown RBP25.85■■□□□ 1.73
PABPN1-201ENST00000216727 DMRTC1Q5HYR2 192 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 C1QL2Q7Z5L3 287 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 CPEB3Q8NE35 698 aaKnown RBP25.85■■□□□ 1.73
PABPN1-201ENST00000216727 NUDCD2Q8WVJ2 157 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 TNFAIP8L1Q8WVP5 186 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 ZNF436Q9C0F3 470 aaPredicted RBP25.85■■□□□ 1.73
PABPN1-201ENST00000216727 PRDM14Q9GZV8 571 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 SLA2Q9H6Q3 261 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms