RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Ldlrad4Q8BWJ4 306 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 CenpoQ8K015 298 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Swsap1Q8VCI7 278 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Supt7lQ9CZV5 412 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 EqtnQ9D9V2 337 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Tmem25Q9DCF1 365 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Ccdc166S4R181 449 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Zfhx3Q61329 3726 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Pkd1l3Q2EG98 2201 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Gm8797A0A0A6YW67 77 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Gm4778L7N229 365 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Psmb1O09061 240 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Il6P08505 211 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 UbbP0CG49 305 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 UbcP0CG50 734 aaKnown RBP10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Rps27aP62983 156 aaKnown RBP10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Uba52P62984 128 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Map2k6P70236 334 aaKnown RBP10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Cobll1Q3UMF0 1273 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr1282Q7TQY5 305 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr1281Q7TQY6 305 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Ankrd34cQ8BLB8 534 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Znf768Q8R0T2 568 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 0610009B22RikQ8R3W2 140 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Mitd1Q8VDV8 249 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr410Q8VFX7 315 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr402Q8VFX8 315 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr378Q8VGT2 314 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Nt5dc2Q91X76 390 aaKnown RBP10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Snx18Q91ZR2 614 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Mrpl28Q9D1B9 257 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Tlnrd1Q9ERE8 362 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 TollipQ9QZ06 274 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 KantrA0A1W2P7I0 76 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Obp1bA2AEP0 171 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Gm14743A2BHD2 171 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Gm21761J3QK00 171 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Ascl4M0QW46 144 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Ear3O35290 156 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 DhodhO35435 395 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Slc2a1P17809 492 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Adrb2P18762 418 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Smn1P97801 288 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 B4galnt1Q09200 533 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Prss48Q14B25 312 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Arhgap9Q1HDU4 648 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Gpr160Q3U3F9 336 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Clns1aQ61189 236 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Il11ra1Q64385 432 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Zer1Q80ZJ6 779 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Cbln2Q8BGU2 224 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Lrp12Q8BUJ9 858 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Fam120cQ8C3F2 1091 aaKnown RBP10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr307Q8VFN8 313 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr1423Q8VFV0 310 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr584Q8VGW0 319 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 QprtQ91X91 299 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Pink1Q99MQ3 580 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 HypmQ9CR04 117 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Xrcc2Q9CX47 278 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Trappc6bQ9D289 158 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Plp2Q9R1Q7 152 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Hebp2Q9WU63 205 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 PthQ9Z0L6 115 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Muc5acE9QAQ8 3455 aa10.39□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Vmn2r107E9PZJ7 861 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 BC051665E9Q623 330 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Gm3633L7N233 213 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Gm9611L7N476 213 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Zfp11P10751 647 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Ier2P17950 221 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Muc13P19467 573 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Lyl1P27792 278 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Ptx3P48759 381 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Klhl8P59280 629 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Tmem217Q14AF1 189 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Gpr55Q3UJF0 327 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Rbm48Q8K2X2 371 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Q8R3Y5 413 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Sla2Q8R4L0 259 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 MetrnlQ8VE43 311 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Sav1Q8VEB2 386 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr732Q8VFT5 308 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Nop16Q9CPT5 178 aaKnown RBP10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 IcaQ9DBD0 700 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Clec3aQ9EPW4 196 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Arl6ip1Q9JKW0 203 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Reep6Q9JM62 201 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Gm3543D3Z235 184 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 BC035044E0CXF8 138 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Olfr419E9Q0Y7 313 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Vmn1r152E9Q9N3 307 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Vmn1r175K7N6T9 304 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Vmn1r104L7N293 307 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 P01808 119 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 KitlgP20826 273 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Ikzf2P81183 526 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Trim63Q38HM4 350 aa10.38□□□□□ -0.75
Col9a1-202ENSMUST00000088349 Tmem164Q6PHN7 296 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms