RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Q9CWB7 115 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr888Q9EQA5 314 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cacna1dQ99246 2179 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Zfp69A2A761 587 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Akirin2B1AXD8 201 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tex45G3XA23 500 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Smim22J3QP37 91 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Prrt1O35449 306 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Irs3O54718 495 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gfi1bO70237 330 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 AdaP03958 352 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 SlbpP97440 275 aaKnown RBP13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Msto1Q2YDW2 556 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Mapk3Q63844 380 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Prmt8Q6PAK3 394 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Klhl13Q80TF4 654 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 TMEM229BQ8BFQ2 167 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Oxa1lQ8BGA9 433 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Pck2Q8BH04 640 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Lhfpl6Q8BM86 200 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Rnf122Q8BP31 155 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Arrb1Q8BWG8 418 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 LiphQ8CIV3 451 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cacul1Q8R0X2 377 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Apbb3Q8R1C9 486 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Lrrc61Q8R2R5 259 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Rnf113a1Q8R3P8 341 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr307Q8VFN8 313 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Zfp959Q91VM8 539 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Eif2b1Q99LC8 305 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cops7aQ9CZ04 275 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Fxyd6Q9D164 94 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Trappc6bQ9D289 158 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Ethe1Q9DCM0 254 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gm21981D3Z6Q6 369 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr613E9PYB4 317 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gm8660K7N6J2 305 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 SparcP07214 302 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Klk1b9P15949 261 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tpi1P17751 299 aaKnown RBP13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gdi1P50396 447 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Kcng3P59053 433 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gng8P63078 70 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Lemd1Q14C37 129 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Vat1Q62465 406 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr967Q7TRA6 310 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Naa40Q8VE10 237 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr394Q8VGR5 310 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Ndufb2Q9CPU2 105 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Magt1Q9CQY5 335 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tex12Q9CR81 123 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Med8Q9D7W5 268 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Mfsd1Q9DC37 464 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Smco4Q9JIS3 59 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Greb1Q3UHK3 1954 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 9930021J03RikH3BKP8 2027 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr1095A3KPP7 308 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Adrb2P18762 418 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 KitlgP20826 273 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tie1Q06806 1134 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cxcl17Q5UW37 119 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Pla2g7Q60963 440 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Enpp3Q6DYE8 874 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Flrt1Q6RKD8 674 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr776Q7TRI3 312 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr201Q7TS38 308 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Il34Q8R1R4 235 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Vmn1r73Q8R293 303 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr1347Q8VF33 319 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr1497Q8VG11 314 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Il24Q925S4 181 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Emc4Q9CZX9 183 aa13.31□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Prob1A0A087WR45 1010 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Galr3O88853 370 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 P01882 290 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Klk1P15947 261 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 NdnP25233 325 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tnfsf9P41274 309 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Eif1P48024 113 aaKnown RBP13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 ElobP62869 118 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cobll1Q3UMF0 1273 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Il11ra1Q64385 432 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Zar1Q80SU3 361 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Avl9Q80U56 649 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cacfd1Q8BG21 171 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gm42417Q8K1D0 126 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr135Q8VEY4 312 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr1423Q8VFV0 310 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cst14Q8VII3 130 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tmem205Q91XE8 189 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Nudcd2Q9CQ48 157 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Eif1bQ9CXU9 113 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Trp53tg5Q9D976 238 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Rrp8Q9DB85 457 aaKnown RBP13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tysnd1Q9DBA6 568 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Lgals8Q9JL15 316 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Sec61a2Q9JLR1 476 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Coro1bQ9WUM3 484 aaKnown RBP13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Angptl4Q9Z1P8 410 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 71.1 ms