RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 RhofQ8BYP3 211 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Defb21Q8C5Z4 100 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Asb13Q8VBX0 278 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr168Q8VF05 312 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr1378Q8VGH0 315 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Zfp959Q91VM8 539 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Mgat2Q921V5 442 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Nudcd2Q9CQ48 157 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Alkbh7Q9D6Z0 221 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gpx2Q9JHC0 190 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Mfap5Q9QZJ6 164 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Clcf1Q9QZM3 225 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Fbxo15Q9QZN0 433 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 H2afb3S4R1G7 115 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Pcnx3Q8VI59 2028 aa12.06□□□□□ -0.48
Nup88-201ENSMUST00000035283 Ighv16-1A0A0A6YW39 117 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 KantrA0A1W2P7I0 76 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr747E9PXH6 313 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr749E9Q438 313 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Slc17a3G3UWD9 498 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr936J3KMV2 267 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Vmn2r124K7N789 855 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Zfp977L7N2E7 438 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 EomesO54839 707 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 CtsbP10605 339 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Selenbp1P17563 472 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Capza1P47753 286 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 RptnP97347 1118 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 A4gntQ14BT6 341 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Mogat2Q80W94 334 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Adamts4Q8BNJ2 833 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tm6sf2Q8R1J1 378 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Rnf113a1Q8R3P8 341 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr1497Q8VG11 314 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Lpcat3Q91V01 487 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Defb8Q91V82 60 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Il24Q925S4 181 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Atg5Q99J83 275 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Atp5sQ9CRA7 200 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Emc4Q9CZX9 183 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Rnf186Q9D241 226 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Acot12Q9DBK0 556 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr887Q9EQA6 309 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr1289A0A288CFY5 326 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gm3633L7N233 213 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gm9611L7N476 213 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 EdaO54693 391 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tnfrsf1bP25119 474 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Sox1P53783 391 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Hcrtr2P58308 460 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gng8P63078 70 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gpr55Q3UJF0 327 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gm1673Q3UR78 90 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 SrmsQ62270 496 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr1211Q7TR09 311 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Plekhm1Q7TSI1 1074 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 QdprQ8BVI4 241 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Slc16a13Q8CE94 428 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Upp2Q8CGR7 320 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr307Q8VFN8 313 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr378Q8VGT2 314 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Eif2b1Q99LC8 305 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Magt1Q9CQY5 335 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Xrcc2Q9CX47 278 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tmem138Q9D6G5 162 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Reep6Q9JM62 201 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Sult1b1Q9QWG7 299 aa12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Dock7Q8R1A4 2130 aaKnown RBP12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Ranbp2Q9ERU9 3053 aaKnown RBP12.05□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr685A0A1L1SVG7 331 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Vmn1r174E9PYW5 313 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Vmn2r107E9PZJ7 861 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 GzmmO08643 264 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 PipP02816 146 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Cox5bP19536 128 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Prss43Q76HL1 382 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr1357Q7TQU7 313 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Skida1Q80YR3 822 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 FntbQ8K2I1 437 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr510Q8VEW6 314 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr1395Q8VGD7 317 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Ms4a8Q99N10 290 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Chchd2Q9D1L0 153 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Med8Q9D7W5 268 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Ldb3Q9JKS4 723 aaKnown RBP12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Heatr5aQ5PRF0 2038 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tnrc18Q80WC3 2878 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 MyofQ69ZN7 2048 aaKnown RBP12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gm21294A0A087WS79 222 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gm11756A2BEJ1 356 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tmem240B2RWJ3 173 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Wisp3D3Z5L9 354 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Vmn1r159K7N701 305 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Mrpl23O35972 146 aaKnown RBP12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 P01808 119 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Zfp27P10077 819 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Crabp1P62965 137 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Fbxw22Q5XG67 466 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr479Q7TRV1 327 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Kiaa1456Q80WQ4 447 aa12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms