RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 AKT1S1Q96B36 256 aa11.66□□□□□ -0.54
PHGDH-215ENST00000641371 CWC22Q9HCG8 908 aaKnown RBP11.66□□□□□ -0.54
PHGDH-215ENST00000641371 SEC31BQ9NQW1 1179 aa11.66□□□□□ -0.54
PHGDH-215ENST00000641371 CHMP5Q9NZZ3 219 aa11.66□□□□□ -0.54
PHGDH-215ENST00000641371 A0A0D9SFI3 127 aa11.65□□□□□ -0.54
PHGDH-215ENST00000641371 ADORA1P30542 326 aa11.65□□□□□ -0.54
PHGDH-215ENST00000641371 FKBP4Q02790 459 aaKnown RBP eCLIP11.65□□□□□ -0.54
PHGDH-215ENST00000641371 GRAPQ13588 217 aa11.65□□□□□ -0.54
PHGDH-215ENST00000641371 NECTIN1Q15223 517 aa11.65□□□□□ -0.54
PHGDH-215ENST00000641371 ANKRD1Q15327 319 aa11.65□□□□□ -0.54
PHGDH-215ENST00000641371 UBE3CQ15386 1083 aa11.65□□□□□ -0.54
PHGDH-215ENST00000641371 GRAPLQ8TC17 118 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-215ENST00000641371 APPBP2Q92624 585 aa11.65□□□□□ -0.54
PHGDH-215ENST00000641371 FAM227BQ96M60 508 aa11.65□□□□□ -0.54
PHGDH-215ENST00000641371 TFCP2L1Q9NZI6 479 aa11.65□□□□□ -0.54
PHGDH-215ENST00000641371 CTNNA3Q9UI47 895 aa11.65□□□□□ -0.54
PHGDH-215ENST00000641371 DOCK2Q92608 1830 aa11.65□□□□□ -0.55
PHGDH-215ENST00000641371 NRXN2Q9P2S2 1712 aa11.64□□□□□ -0.55
PHGDH-215ENST00000641371 DUOX1Q9NRD9 1551 aa11.64□□□□□ -0.55
PHGDH-215ENST00000641371 TAF5LO75529 589 aa11.64□□□□□ -0.55
PHGDH-215ENST00000641371 SERPINB2P05120 415 aa11.64□□□□□ -0.55
PHGDH-215ENST00000641371 HMGB1P09429 215 aaKnown RBP11.64□□□□□ -0.55
PHGDH-215ENST00000641371 PDIA4P13667 645 aaKnown RBP11.64□□□□□ -0.55
PHGDH-215ENST00000641371 NEK4P51957 841 aa11.64□□□□□ -0.55
PHGDH-215ENST00000641371 MAP3K12Q12852 859 aa11.64□□□□□ -0.55
PHGDH-215ENST00000641371 CRY2Q49AN0 593 aa11.64□□□□□ -0.55
PHGDH-215ENST00000641371 RPGRQ92834 1020 aaKnown RBP11.64□□□□□ -0.55
PHGDH-215ENST00000641371 CHMP4CQ96CF2 233 aa11.64□□□□□ -0.55
PHGDH-215ENST00000641371 RBM17Q96I25 401 aaKnown RBP11.64□□□□□ -0.55
PHGDH-215ENST00000641371 MINPP1Q9UNW1 487 aa11.64□□□□□ -0.55
PHGDH-215ENST00000641371 LEMD3Q9Y2U8 911 aa11.64□□□□□ -0.55
PHGDH-215ENST00000641371 RBM8AQ9Y5S9 174 aaKnown RBP11.64□□□□□ -0.55
PHGDH-215ENST00000641371 ZNF804BA4D1E1 1349 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 BBOX1O75936 387 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 MCAMP43121 646 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 ZAP70P43403 619 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 SF3B2Q13435 895 aaKnown RBP11.63□□□□□ -0.55
PHGDH-215ENST00000641371 VPS53Q5VIR6 699 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 CREB3L3Q68CJ9 461 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 PRR5LQ6MZQ0 368 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 VPS37DQ86XT2 251 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 PROM2Q8N271 834 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 SPATA5Q8NB90 893 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 INTS4Q96HW7 963 aaKnown RBP11.63□□□□□ -0.55
PHGDH-215ENST00000641371 CRAMP1Q96RY5 1269 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 DENND2AQ9ULE3 1009 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 SNX14Q9Y5W7 946 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 CYP46A1Q9Y6A2 500 aa11.63□□□□□ -0.55
PHGDH-215ENST00000641371 RPAP1Q9BWH6 1393 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-215ENST00000641371 MYH13Q9UKX3 1938 aa11.62□□□□□ -0.55
PHGDH-215ENST00000641371 KLRG2A4D1S0 409 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-215ENST00000641371 HOXA10P31260 410 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-215ENST00000641371 ADD2P35612 726 aa11.62□□□□□ -0.55
PHGDH-215ENST00000641371 PHKA1P46020 1223 aa11.62□□□□□ -0.55
PHGDH-215ENST00000641371 SLC4A3P48751 1232 aa11.62□□□□□ -0.55
PHGDH-215ENST00000641371 C15orf52Q6ZUT6 534 aaKnown RBP11.62□□□□□ -0.55
PHGDH-215ENST00000641371 ZGPATQ8N5A5 531 aaKnown RBP11.62□□□□□ -0.55
PHGDH-215ENST00000641371 EDC3Q96F86 508 aaKnown RBP11.62□□□□□ -0.55
PHGDH-215ENST00000641371 ZSCAN31Q96LW9 406 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-215ENST00000641371 ANP32EQ9BTT0 268 aa11.62□□□□□ -0.55
PHGDH-215ENST00000641371 IL25Q9H293 177 aa11.62□□□□□ -0.55
PHGDH-215ENST00000641371 ALDH8A1Q9H2A2 487 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-215ENST00000641371 ANTXR1Q9H6X2 564 aa11.62□□□□□ -0.55
PHGDH-215ENST00000641371 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
PHGDH-215ENST00000641371 SH2B1Q9NRF2 756 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-215ENST00000641371 TNRC6CQ9HCJ0 1690 aaKnown RBP11.62□□□□□ -0.55
PHGDH-215ENST00000641371 ZMYM6O95789 1325 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 XDHP47989 1333 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
PHGDH-215ENST00000641371 SLC27A2O14975 620 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 GNAT2P19087 354 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 PTMSP20962 102 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 PDE6BP35913 854 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 BAG6P46379 1132 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 NUCB2P80303 420 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 PTH1RQ03431 593 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 WASHC4Q2M389 1173 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 PRPF40BQ6NWY9 871 aaKnown RBP11.61□□□□□ -0.55
PHGDH-215ENST00000641371 AMIGO3Q86WK7 504 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 CELF1Q92879 486 aaKnown RBP11.61□□□□□ -0.55
PHGDH-215ENST00000641371 BRIP1Q9BX63 1249 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 STK32BQ9NY57 414 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 PARP3Q9Y6F1 533 aa11.61□□□□□ -0.55
PHGDH-215ENST00000641371 MAST3O60307 1309 aa11.6□□□□□ -0.55
PHGDH-215ENST00000641371 CYP2E1P05181 493 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-215ENST00000641371 ATP2B4P23634 1241 aa11.6□□□□□ -0.55
PHGDH-215ENST00000641371 CUL4AQ13619 759 aa11.6□□□□□ -0.55
PHGDH-215ENST00000641371 BLOC1S2Q6QNY1 142 aa11.6□□□□□ -0.55
PHGDH-215ENST00000641371 RUFY3Q7L099 469 aa11.6□□□□□ -0.55
PHGDH-215ENST00000641371 ZNF589Q86UQ0 364 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-215ENST00000641371 CCDC125Q86Z20 511 aa11.6□□□□□ -0.55
PHGDH-215ENST00000641371 HELBQ8NG08 1087 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-215ENST00000641371 TMX4Q9H1E5 349 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-215ENST00000641371 PALD1Q9ULE6 856 aa11.6□□□□□ -0.55
PHGDH-215ENST00000641371 HSPD1P10809 573 aaKnown RBP11.59□□□□□ -0.55
PHGDH-215ENST00000641371 CASTP20810 708 aaKnown RBP11.59□□□□□ -0.55
PHGDH-215ENST00000641371 ALDH1B1P30837 517 aa11.59□□□□□ -0.55
PHGDH-215ENST00000641371 RASGRF1Q13972 1273 aa11.59□□□□□ -0.55
PHGDH-215ENST00000641371 SCARF1Q14162 830 aa11.59□□□□□ -0.55
PHGDH-215ENST00000641371 IMMTQ16891 758 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms