RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 PIH1D3Q9NQM4 214 aaKnown RBP15.17■□□□□ 0.02
SPIN3-243ENST00000640717 CAMTA2O94983 1202 aa15.16■□□□□ 0.02
SPIN3-243ENST00000640717 SKOR2Q2VWA4 1001 aaPredicted RBP15.16■□□□□ 0.02
SPIN3-243ENST00000640717 L1TD1Q5T7N2 865 aaKnown RBP15.16■□□□□ 0.02
SPIN3-243ENST00000640717 CCDC102BQ68D86 513 aa15.16■□□□□ 0.02
SPIN3-243ENST00000640717 CIAO1O76071 339 aa15.16■□□□□ 0.02
SPIN3-243ENST00000640717 ZNF34Q8IZ26 560 aa15.16■□□□□ 0.02
SPIN3-243ENST00000640717 WDR33Q9C0J8 1336 aaKnown RBP15.16■□□□□ 0.02
SPIN3-243ENST00000640717 FSD2A1L4K1 749 aa15.15■□□□□ 0.02
SPIN3-243ENST00000640717 ZSCAN22P10073 491 aaPredicted RBP15.15■□□□□ 0.02
SPIN3-243ENST00000640717 ERFEQ4G0M1 354 aa15.15■□□□□ 0.02
SPIN3-243ENST00000640717 ZMYM1Q5SVZ6 1142 aa15.15■□□□□ 0.02
SPIN3-243ENST00000640717 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
SPIN3-243ENST00000640717 PDE8BO95263 885 aa15.15■□□□□ 0.02
SPIN3-243ENST00000640717 RXRAP19793 462 aa15.15■□□□□ 0.02
SPIN3-243ENST00000640717 GNPATO15228 680 aa15.14■□□□□ 0.01
SPIN3-243ENST00000640717 USPL1Q5W0Q7 1092 aa15.14■□□□□ 0.01
SPIN3-243ENST00000640717 NKX2-3Q8TAU0 364 aa15.14■□□□□ 0.01
SPIN3-243ENST00000640717 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
SPIN3-243ENST00000640717 COL16A1Q07092 1604 aaPredicted RBP15.14■□□□□ 0.01
SPIN3-243ENST00000640717 MIGA1Q8NAN2 632 aa15.14■□□□□ 0.01
SPIN3-243ENST00000640717 ABCF2Q9UG63 623 aa15.14■□□□□ 0.01
SPIN3-243ENST00000640717 ITGB4P16144 1822 aa15.13■□□□□ 0.01
SPIN3-243ENST00000640717 E7EWF7 191 aa15.13■□□□□ 0.01
SPIN3-243ENST00000640717 GPAA1O43292 621 aa15.13■□□□□ 0.01
SPIN3-243ENST00000640717 FGAP02671 866 aa15.13■□□□□ 0.01
SPIN3-243ENST00000640717 SLC4A8Q2Y0W8 1093 aa15.13■□□□□ 0.01
SPIN3-243ENST00000640717 MTMR6Q9Y217 621 aa15.13■□□□□ 0.01
SPIN3-243ENST00000640717 F13A1P00488 732 aa15.13■□□□□ 0.01
SPIN3-243ENST00000640717 CCDC144CPQ8IYA2 1237 aa15.13■□□□□ 0.01
SPIN3-243ENST00000640717 CHMP4CQ96CF2 233 aa15.13■□□□□ 0.01
SPIN3-243ENST00000640717 TM6SF1Q9BZW5 370 aa15.13■□□□□ 0.01
SPIN3-243ENST00000640717 GYG1P46976 350 aa15.12■□□□□ 0.01
SPIN3-243ENST00000640717 TOMM22Q9NS69 142 aa15.12■□□□□ 0.01
SPIN3-243ENST00000640717 LAMB4A4D0S4 1761 aa15.12■□□□□ 0.01
SPIN3-243ENST00000640717 UBR2Q8IWV8 1755 aa15.12■□□□□ 0.01
SPIN3-243ENST00000640717 TBC1D9BQ66K14 1250 aa15.12■□□□□ 0.01
SPIN3-243ENST00000640717 OTUD7BQ6GQQ9 843 aa15.12■□□□□ 0.01
SPIN3-243ENST00000640717 ZNF532Q9HCE3 1301 aa15.12■□□□□ 0.01
SPIN3-243ENST00000640717 RIC1Q4ADV7 1423 aa15.12■□□□□ 0.01
SPIN3-243ENST00000640717 MRE11P49959 708 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 GPR108Q9NPR9 543 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 GJB4Q9NTQ9 266 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 SRCAPQ6ZRS2 3230 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 ERVV-1B6SEH8 477 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 FOXP2O15409 715 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 SCRN1Q12765 414 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 RASGRF1Q13972 1273 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 MAGEB6Q8N7X4 407 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 CDCA7Q9BWT1 371 aaPredicted RBP15.11■□□□□ 0.01
SPIN3-243ENST00000640717 RBSNQ9H1K0 784 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 HMG20BQ9P0W2 317 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 IGHMBP2P38935 993 aaKnown RBP15.11■□□□□ 0.01
SPIN3-243ENST00000640717 CLEC17AQ6ZS10 378 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 KCNB2Q92953 911 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 PLA2G12BQ9BX93 195 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 HELLSQ9NRZ9 838 aa15.11■□□□□ 0.01
SPIN3-243ENST00000640717 THRAP3Q9Y2W1 955 aaKnown RBP15.11■□□□□ 0.01
SPIN3-243ENST00000640717 TJP1Q07157 1748 aa15.1■□□□□ 0.01
SPIN3-243ENST00000640717 SMIM22K7EJ46 135 aa15.1■□□□□ 0.01
SPIN3-243ENST00000640717 PRKAB2O43741 272 aa15.1■□□□□ 0.01
SPIN3-243ENST00000640717 RRP12Q5JTH9 1297 aaKnown RBP15.1■□□□□ 0.01
SPIN3-243ENST00000640717 VGLL2Q8N8G2 317 aa15.1■□□□□ 0.01
SPIN3-243ENST00000640717 ZSCAN31Q96LW9 406 aaPredicted RBP15.1■□□□□ 0.01
SPIN3-243ENST00000640717 FTOQ9C0B1 505 aaKnown RBP eCLIP15.1■□□□□ 0.01
SPIN3-243ENST00000640717 SH2B1Q9NRF2 756 aaPredicted RBP15.1■□□□□ 0.01
SPIN3-243ENST00000640717 COL14A1Q05707 1796 aaKnown RBP15.1■□□□□ 0.01
SPIN3-243ENST00000640717 PHLPP1O60346 1717 aa15.1■□□□□ 0.01
SPIN3-243ENST00000640717 NASPP49321 788 aaPredicted RBP15.1■□□□□ 0.01
SPIN3-243ENST00000640717 CHRNDQ07001 517 aa15.1■□□□□ 0.01
SPIN3-243ENST00000640717 ARMT1Q9H993 441 aa15.1■□□□□ 0.01
SPIN3-243ENST00000640717 CCNL1Q9UK58 526 aaPredicted RBP15.1■□□□□ 0.01
SPIN3-243ENST00000640717 CDHR2Q9BYE9 1310 aa15.1■□□□□ 0.01
SPIN3-243ENST00000640717 EPB41L2O43491 1005 aaKnown RBP15.09■□□□□ 0.01
SPIN3-243ENST00000640717 NTSR2O95665 410 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 KLRK1P26718 216 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 PLCB2Q00722 1185 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 FAM184AQ8NB25 1140 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 CELF1Q92879 486 aaKnown RBP15.09■□□□□ 0.01
SPIN3-243ENST00000640717 PLEKHG2Q9H7P9 1386 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 SLIT2O94813 1529 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 H3BQV1 296 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 PUM3Q15397 648 aaKnown RBP15.09■□□□□ 0.01
SPIN3-243ENST00000640717 CCDC152Q4G0S7 254 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 IFFO2Q5TF58 517 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 TFCP2L1Q9NZI6 479 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 LTBP4Q8N2S1 1624 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 CAMK4Q16566 473 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 DHX32Q7L7V1 743 aaKnown RBP15.09■□□□□ 0.01
SPIN3-243ENST00000640717 MYL10Q9BUA6 226 aa15.09■□□□□ 0.01
SPIN3-243ENST00000640717 NUP188Q5SRE5 1749 aa15.08■□□□□ 0.01
SPIN3-243ENST00000640717 DOT1LQ8TEK3 1739 aa15.08■□□□□ 0
SPIN3-243ENST00000640717 KRT32Q14532 448 aa15.08■□□□□ 0
SPIN3-243ENST00000640717 IL17RAQ96F46 866 aa15.08■□□□□ 0
SPIN3-243ENST00000640717 ZKSCAN3Q9BRR0 538 aa15.08■□□□□ 0
SPIN3-243ENST00000640717 TCHHQ07283 1943 aa15.08■□□□□ 0
SPIN3-243ENST00000640717 PDE6AP16499 860 aa15.08■□□□□ 0
SPIN3-243ENST00000640717 HSPA1LP34931 641 aa15.08■□□□□ 0
SPIN3-243ENST00000640717 CTDSPL2Q05D32 466 aa15.08■□□□□ 0
SPIN3-243ENST00000640717 CCDC82Q8N4S0 544 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms