RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 PRAM1Q96QH2 718 aa12.68□□□□□ -0.38
SPIN3-230ENST00000639888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.68□□□□□ -0.38
SPIN3-230ENST00000639888 KDM5DQ9BY66 1539 aa12.68□□□□□ -0.38
SPIN3-230ENST00000639888 RPGRIP1LQ68CZ1 1315 aa12.68□□□□□ -0.38
SPIN3-230ENST00000639888 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
SPIN3-230ENST00000639888 GOLGA6BA6NDN3 693 aa12.68□□□□□ -0.38
SPIN3-230ENST00000639888 TUBB4BP68371 445 aa12.68□□□□□ -0.38
SPIN3-230ENST00000639888 C8orf76Q96K31 380 aa12.68□□□□□ -0.38
SPIN3-230ENST00000639888 MED4Q9NPJ6 270 aa12.68□□□□□ -0.38
SPIN3-230ENST00000639888 BUB1BO60566 1050 aaPredicted RBP12.68□□□□□ -0.38
SPIN3-230ENST00000639888 CDC25BP30305 580 aa12.68□□□□□ -0.38
SPIN3-230ENST00000639888 CALR3Q96L12 384 aaKnown RBP12.68□□□□□ -0.38
SPIN3-230ENST00000639888 IRAK4Q9NWZ3 460 aa12.68□□□□□ -0.38
SPIN3-230ENST00000639888 ADCY10Q96PN6 1610 aa12.67□□□□□ -0.38
SPIN3-230ENST00000639888 MARCKSP29966 332 aaPredicted RBP12.67□□□□□ -0.38
SPIN3-230ENST00000639888 SYKP43405 635 aa12.67□□□□□ -0.38
SPIN3-230ENST00000639888 ADKP55263 362 aaKnown RBP12.67□□□□□ -0.38
SPIN3-230ENST00000639888 SF3A3Q12874 501 aaKnown RBP eCLIP12.67□□□□□ -0.383e-6■■■□□ 16.5
SPIN3-230ENST00000639888 SPECC1Q5M775 1068 aa12.67□□□□□ -0.38
SPIN3-230ENST00000639888 PNMA8AQ86V59 439 aaPredicted RBP12.67□□□□□ -0.38
SPIN3-230ENST00000639888 C14orf93Q9H972 538 aaKnown RBP12.67□□□□□ -0.38
SPIN3-230ENST00000639888 INCENPQ9NQS7 918 aa12.67□□□□□ -0.38
SPIN3-230ENST00000639888 ACTN3Q08043 901 aaPredicted RBP12.67□□□□□ -0.38
SPIN3-230ENST00000639888 TMEM87AQ8NBN3 555 aa12.67□□□□□ -0.38
SPIN3-230ENST00000639888 DHX58Q96C10 678 aa12.67□□□□□ -0.38
SPIN3-230ENST00000639888 CAPS2Q9BXY5 557 aa12.67□□□□□ -0.38
SPIN3-230ENST00000639888 ABCB6Q9NP58 842 aa12.67□□□□□ -0.38
SPIN3-230ENST00000639888 HLTFQ14527 1009 aaKnown RBP eCLIP12.67□□□□□ -0.38
SPIN3-230ENST00000639888 H2AFXP16104 143 aaPredicted RBP12.66□□□□□ -0.38
SPIN3-230ENST00000639888 ATP1A2P50993 1020 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 CASP8Q14790 479 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 GNL3LQ9NVN8 582 aaKnown RBP12.66□□□□□ -0.38
SPIN3-230ENST00000639888 TTC41PQ6P2S7 1318 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 PAFAH1B1P43034 410 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 ME3Q16798 604 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 MYL5Q02045 173 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 PRPF38AQ8NAV1 312 aaKnown RBP12.66□□□□□ -0.38
SPIN3-230ENST00000639888 CEP89Q96ST8 783 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 ZNF446Q9NWS9 450 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 PHLPP2Q6ZVD8 1323 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 MAST1Q9Y2H9 1570 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 MAGI2Q86UL8 1455 aa12.66□□□□□ -0.38
SPIN3-230ENST00000639888 TBC1D31Q96DN5 1066 aa12.65□□□□□ -0.38
SPIN3-230ENST00000639888 NEUROD6Q96NK8 337 aa12.65□□□□□ -0.38
SPIN3-230ENST00000639888 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.65□□□□□ -0.38
SPIN3-230ENST00000639888 PTPRCP08575 1304 aa12.65□□□□□ -0.38
SPIN3-230ENST00000639888 CHUKO15111 745 aa12.65□□□□□ -0.38
SPIN3-230ENST00000639888 HPDP32754 393 aaPredicted RBP12.65□□□□□ -0.38
SPIN3-230ENST00000639888 HDGFP51858 240 aaKnown RBP12.65□□□□□ -0.38
SPIN3-230ENST00000639888 CORO7P57737 925 aa12.65□□□□□ -0.38
SPIN3-230ENST00000639888 TADA3O75528 432 aa12.65□□□□□ -0.39
SPIN3-230ENST00000639888 SND1Q7KZF4 910 aaKnown RBP eCLIP12.65□□□□□ -0.39
SPIN3-230ENST00000639888 SRGAP1Q7Z6B7 1085 aa12.65□□□□□ -0.39
SPIN3-230ENST00000639888 NAPGQ99747 312 aaPredicted RBP12.65□□□□□ -0.39
SPIN3-230ENST00000639888 RIPOR2Q9Y4F9 1068 aa12.65□□□□□ -0.39
SPIN3-230ENST00000639888 RGS12O14924 1447 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 MAP2K1Q02750 393 aaPredicted RBP12.64□□□□□ -0.39
SPIN3-230ENST00000639888 ENOX2Q16206 610 aaKnown RBP12.64□□□□□ -0.39
SPIN3-230ENST00000639888 CCDC102BQ68D86 513 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 CPLX4Q7Z7G2 160 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 RHPN1Q8TCX5 695 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 CCDC113Q9H0I3 377 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
SPIN3-230ENST00000639888 RTEL1-TNFRSF6BF6WH68 1400 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 JAK2O60674 1132 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 AMPHP49418 695 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 LONRF3Q496Y0 759 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 CYB5RLQ6IPT4 315 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 IQCA1Q86XH1 822 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 RAB11FIP4Q86YS3 637 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 NEK1Q96PY6 1258 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 TACO1Q9BSH4 297 aaKnown RBP12.64□□□□□ -0.39
SPIN3-230ENST00000639888 WASHC4Q2M389 1173 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.64□□□□□ -0.39
SPIN3-230ENST00000639888 CABP1Q9NZU7 370 aa12.64□□□□□ -0.39
SPIN3-230ENST00000639888 ZMYND10O75800 440 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 SCP2P22307 547 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 HNRNPH1P31943 449 aaKnown RBP12.63□□□□□ -0.39
SPIN3-230ENST00000639888 ELF1P32519 619 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 CKAP4Q07065 602 aaKnown RBP12.63□□□□□ -0.39
SPIN3-230ENST00000639888 GOLGA6L10A0A0M3HER8 536 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 SGSM2O43147 1006 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 IFT88Q13099 833 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 IMMTQ16891 758 aaKnown RBP12.63□□□□□ -0.39
SPIN3-230ENST00000639888 CREB3L3Q68CJ9 461 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 SLC52A1Q9NWF4 448 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 TTC37Q6PGP7 1564 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 N4BP3O15049 544 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 YEATS4O95619 227 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 TBC1D8O95759 1140 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 ZKSCAN8Q15776 578 aaPredicted RBP12.63□□□□□ -0.39
SPIN3-230ENST00000639888 SNCBQ16143 134 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 E4F1Q66K89 784 aaPredicted RBP12.63□□□□□ -0.39
SPIN3-230ENST00000639888 FOXR1Q6PIV2 292 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 NYAP1Q6ZVC0 841 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 LRRN4CLQ8ND94 238 aa12.63□□□□□ -0.39
SPIN3-230ENST00000639888 SPTLC2O15270 562 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms