RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 SHTN1A0MZ66 631 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 KIF3CO14782 793 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 NEMFO60524 1076 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 GJB2P29033 226 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 HOXC9P31274 260 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 PKP1Q13835 747 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 CAMK4Q16566 473 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 TTC39AQ5SRH9 613 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 USP48Q86UV5 1035 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 CCDC8Q9H0W5 538 aaPredicted RBP6.53□□□□□ -1.36
SCARB2-218ENST00000639715 CHPF2Q9P2E5 772 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 PNPLA6Q8IY17 1366 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 PES1O00541 588 aaKnown RBP6.53□□□□□ -1.36
SCARB2-218ENST00000639715 ME1P48163 572 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 NEDD9Q14511 834 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 CEP57L1Q8IYX8 460 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 RPUSD2Q8IZ73 545 aaKnown RBP6.53□□□□□ -1.36
SCARB2-218ENST00000639715 FBXW7Q969H0 707 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 TRIM6Q9C030 488 aaPredicted RBP6.53□□□□□ -1.36
SCARB2-218ENST00000639715 PTCH1Q13635 1447 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 INO80Q9ULG1 1556 aaPredicted RBP6.53□□□□□ -1.36
SCARB2-218ENST00000639715 A0A087WUV0 522 aaPredicted RBP6.53□□□□□ -1.36
SCARB2-218ENST00000639715 CDKL5O76039 1030 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 EZRP15311 586 aaKnown RBP6.53□□□□□ -1.36
SCARB2-218ENST00000639715 ST5P78524 1137 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 JAKMIP3Q5VZ66 844 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 EFCAB13Q8IY85 973 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 OTUD7AQ8TE49 926 aaPredicted RBP6.53□□□□□ -1.36
SCARB2-218ENST00000639715 IP6K1Q92551 441 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 AKAP2Q9Y2D5 859 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 RAD50Q92878 1312 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 GRM8O00222 908 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 XBP1P17861 261 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 CLCN6P51797 869 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 EIF5P55010 431 aaKnown RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 PSMD2Q13200 908 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 MEX3CQ5U5Q3 659 aaKnown RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 NAIF1Q69YI7 327 aaPredicted RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 N4BP2L2Q92802 583 aaPredicted RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 FMNL2Q96PY5 1086 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 CEP89Q96ST8 783 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 MYD88Q99836 296 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 OSBPL3Q9H4L5 887 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 SSH2Q76I76 1423 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 QRICH2Q9H0J4 1663 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 FRMD3A2A2Y4 597 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 GSPT1P15170 499 aaKnown RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 FOSBP53539 338 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 ZC3H6P61129 1189 aaKnown RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 TSR1Q2NL82 804 aaKnown RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 NBPF11Q86T75 865 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 FERMT3Q86UX7 667 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 IFNL2Q8IZJ0 200 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 RASSF8Q8NHQ8 419 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 EXOC4Q96A65 974 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 DNAI1Q9UI46 699 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 NSFL1CQ9UNZ2 370 aaKnown RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 IRF6O14896 467 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 ECM2O94769 699 aaPredicted RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 VPS53Q5VIR6 699 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 PACS2Q86VP3 889 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 NUP133Q8WUM0 1156 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 SMARCC1Q92922 1105 aaPredicted RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 CCDC97Q96F63 343 aaPredicted RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 NBPF3Q9H094 633 aa6.52□□□□□ -1.37
SCARB2-218ENST00000639715 CPSF1Q10570 1443 aaKnown RBP6.52□□□□□ -1.37
SCARB2-218ENST00000639715 CD2BP2O95400 341 aaKnown RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 F13A1P00488 732 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 INPP5BP32019 993 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 IRX1P78414 480 aaPredicted RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 IMMTQ16891 758 aaKnown RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 CKAP2LQ8IYA6 745 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 CTCFLQ8NI51 663 aaPredicted RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 FAM200AQ8TCP9 573 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 ANKRD24Q8TF21 1146 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 DYDC1Q8WWB3 177 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 ZSCAN16Q9H4T2 348 aaPredicted RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 PCDH10Q9P2E7 1040 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 ADAM21Q9UKJ8 722 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 ODF2LQ9ULJ1 636 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 NRXN1Q9ULB1 1477 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 SNRPA1P09661 255 aaKnown RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 ERCC3P19447 782 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 SCP2P22307 547 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 CEBPZQ03701 1054 aaKnown RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 RNF187Q5TA31 235 aaPredicted RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 A0A087WZG4 1122 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 RBM6P78332 1123 aaKnown RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 ZKSCAN8Q15776 578 aaPredicted RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 ANKRD13DQ6ZTN6 518 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 ARMCX6Q7L4S7 300 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 TADA2BQ86TJ2 420 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 ZSWIM4Q9H7M6 989 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 ANO10Q9NW15 660 aa6.51□□□□□ -1.37
SCARB2-218ENST00000639715 RBM8AQ9Y5S9 174 aaKnown RBP6.51□□□□□ -1.37
SCARB2-218ENST00000639715 SEC31AO94979 1220 aaKnown RBP6.5□□□□□ -1.37
SCARB2-218ENST00000639715 TOM1L2Q6ZVM7 507 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 KRT28Q7Z3Y7 464 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 OTUD6BQ8N6M0 293 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 MRFAP1L1Q96HT8 127 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms