RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 PPIP5K2O43314 1243 aa12.16□□□□□ -0.46
PAX6-242ENST00000638878 VEGFAP15692 232 aaPredicted RBP12.16□□□□□ -0.46
PAX6-242ENST00000638878 C6orf229H3BNL8 230 aa12.15□□□□□ -0.46
PAX6-242ENST00000638878 AOC3Q16853 763 aa12.15□□□□□ -0.46
PAX6-242ENST00000638878 PODNQ7Z5L7 613 aa12.15□□□□□ -0.46
PAX6-242ENST00000638878 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
PAX6-242ENST00000638878 NIM1KQ8IY84 436 aa12.15□□□□□ -0.46
PAX6-242ENST00000638878 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
PAX6-242ENST00000638878 TMEM57Q8N5G2 664 aa12.15□□□□□ -0.46
PAX6-242ENST00000638878 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
PAX6-242ENST00000638878 ANTXR1Q9H6X2 564 aa12.15□□□□□ -0.46
PAX6-242ENST00000638878 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
PAX6-242ENST00000638878 CCDC88AQ3V6T2 1871 aa12.14□□□□□ -0.47
PAX6-242ENST00000638878 MROH5Q6ZUA9 1318 aa12.14□□□□□ -0.47
PAX6-242ENST00000638878 COL4A1P02462 1669 aa12.14□□□□□ -0.47
PAX6-242ENST00000638878 POTECB2RU33 542 aa12.14□□□□□ -0.47
PAX6-242ENST00000638878 GNAI2P04899 355 aa12.14□□□□□ -0.47
PAX6-242ENST00000638878 RFX5P48382 616 aaPredicted RBP12.14□□□□□ -0.47
PAX6-242ENST00000638878 EIF6P56537 245 aaKnown RBP12.14□□□□□ -0.47
PAX6-242ENST00000638878 CHRNDQ07001 517 aa12.14□□□□□ -0.47
PAX6-242ENST00000638878 TNIP1Q15025 636 aa12.14□□□□□ -0.47
PAX6-242ENST00000638878 MEIS3Q99687 375 aa12.14□□□□□ -0.47
PAX6-242ENST00000638878 DUOX1Q9NRD9 1551 aa12.14□□□□□ -0.47
PAX6-242ENST00000638878 ISY1Q9ULR0 285 aaKnown RBP12.14□□□□□ -0.47
PAX6-242ENST00000638878 MED23Q9ULK4 1368 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 IQCA1LA6NCM1 817 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 KIF3CO14782 793 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 CIAO1O76071 339 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 UFL1O94874 794 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 MMP14P50281 582 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 PTPN12Q05209 780 aaKnown RBP12.13□□□□□ -0.47
PAX6-242ENST00000638878 UBE4AQ14139 1066 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 TAF7LQ5H9L4 462 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 SLC51AQ86UW1 340 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 PANK1Q8TE04 598 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 COA1Q9GZY4 146 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 COPRSQ9NQ92 184 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 CHMP3Q9Y3E7 222 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 ZNF804BA4D1E1 1349 aa12.13□□□□□ -0.47
PAX6-242ENST00000638878 TOMM70O94826 608 aa12.12□□□□□ -0.47
PAX6-242ENST00000638878 DDNO94850 711 aaPredicted RBP12.12□□□□□ -0.47
PAX6-242ENST00000638878 RLBP1P12271 317 aa12.12□□□□□ -0.47
PAX6-242ENST00000638878 CXCL9Q07325 125 aa12.12□□□□□ -0.47
PAX6-242ENST00000638878 DPF2Q92785 391 aa12.12□□□□□ -0.47
PAX6-242ENST00000638878 RRAGCQ9HB90 399 aa12.12□□□□□ -0.47
PAX6-242ENST00000638878 CNNM1Q9NRU3 951 aa12.12□□□□□ -0.47
PAX6-242ENST00000638878 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
PAX6-242ENST00000638878 PDE8BO95263 885 aa12.11□□□□□ -0.47
PAX6-242ENST00000638878 VIL1P09327 827 aaKnown RBP12.11□□□□□ -0.47
PAX6-242ENST00000638878 PTMSP20962 102 aa12.11□□□□□ -0.47
PAX6-242ENST00000638878 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
PAX6-242ENST00000638878 DNAJC5GQ8N7S2 189 aa12.11□□□□□ -0.47
PAX6-242ENST00000638878 VGLL2Q8N8G2 317 aa12.11□□□□□ -0.47
PAX6-242ENST00000638878 ZNF594Q96JF6 807 aaPredicted RBP12.11□□□□□ -0.47
PAX6-242ENST00000638878 TNNQ9UQP3 1299 aa12.11□□□□□ -0.47
PAX6-242ENST00000638878 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
PAX6-242ENST00000638878 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
PAX6-242ENST00000638878 COL4A5P29400 1685 aa12.11□□□□□ -0.47
PAX6-242ENST00000638878 ZNF609O15014 1411 aa12.1□□□□□ -0.47
PAX6-242ENST00000638878 TIAM2Q8IVF5 1701 aa12.1□□□□□ -0.47
PAX6-242ENST00000638878 YDJCA8MPS7 323 aa12.1□□□□□ -0.47
PAX6-242ENST00000638878 EYA2O00167 538 aa12.1□□□□□ -0.47
PAX6-242ENST00000638878 EIF5BO60841 1220 aaKnown RBP12.1□□□□□ -0.47
PAX6-242ENST00000638878 RPS12P25398 132 aaKnown RBP12.1□□□□□ -0.47
PAX6-242ENST00000638878 APLP1P51693 650 aa12.1□□□□□ -0.47
PAX6-242ENST00000638878 ATP8B2P98198 1209 aa12.1□□□□□ -0.47
PAX6-242ENST00000638878 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
PAX6-242ENST00000638878 MVPQ14764 893 aaKnown RBP12.1□□□□□ -0.47
PAX6-242ENST00000638878 PNMA8AQ86V59 439 aaPredicted RBP12.1□□□□□ -0.47
PAX6-242ENST00000638878 RBM46Q8TBY0 533 aaKnown RBP12.1□□□□□ -0.47
PAX6-242ENST00000638878 ZNF526Q8TF50 670 aaPredicted RBP12.1□□□□□ -0.47
PAX6-242ENST00000638878 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
PAX6-242ENST00000638878 CHMP5Q9NZZ3 219 aa12.1□□□□□ -0.47
PAX6-242ENST00000638878 DDX19BQ9UMR2 479 aa12.1□□□□□ -0.47
PAX6-242ENST00000638878 ZNF541Q9H0D2 1346 aa12.1□□□□□ -0.47
PAX6-242ENST00000638878 ECE2O60344 883 aa12.09□□□□□ -0.47
PAX6-242ENST00000638878 SEC24BO95487 1268 aa12.09□□□□□ -0.47
PAX6-242ENST00000638878 IL15P40933 162 aaPredicted RBP12.09□□□□□ -0.47
PAX6-242ENST00000638878 ATG9AQ7Z3C6 839 aa12.09□□□□□ -0.47
PAX6-242ENST00000638878 ITPRIPQ8IWB1 547 aa12.09□□□□□ -0.47
PAX6-242ENST00000638878 SSH3Q8TE77 659 aa12.09□□□□□ -0.47
PAX6-242ENST00000638878 TBC1D2Q9BYX2 928 aa12.09□□□□□ -0.47
PAX6-242ENST00000638878 PUS3Q9BZE2 481 aaKnown RBP12.09□□□□□ -0.47
PAX6-242ENST00000638878 ZBTB40Q9NUA8 1239 aa12.09□□□□□ -0.47
PAX6-242ENST00000638878 PCDHB15Q9Y5E8 787 aa12.09□□□□□ -0.47
PAX6-242ENST00000638878 WTIPA6NIX2 430 aaPredicted RBP12.08□□□□□ -0.48
PAX6-242ENST00000638878 G3V3G9 751 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 RIMBP2O15034 1052 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 SRGAP3O43295 1099 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 IL1R1P14778 569 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 FSTL1Q12841 308 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 POLA2Q14181 598 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 LRRC24Q50LG9 513 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 STRIP1Q5VSL9 837 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 AGBL3Q8NEM8 1001 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 HACL1Q9UJ83 578 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 SCN4AP35499 1836 aa12.08□□□□□ -0.48
PAX6-242ENST00000638878 TAF5LO75529 589 aa12.07□□□□□ -0.48
PAX6-242ENST00000638878 FGFR2P21802 821 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms