RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 SRP68Q9UHB9 627 aaKnown RBP19.84■□□□□ 0.77
HCG27-205ENST00000638546 PTMSP20962 102 aa19.83■□□□□ 0.76
HCG27-205ENST00000638546 SETDB2Q96T68 719 aa19.83■□□□□ 0.76
HCG27-205ENST00000638546 ALDH8A1Q9H2A2 487 aaPredicted RBP19.83■□□□□ 0.76
HCG27-205ENST00000638546 GTF2E1P29083 439 aaPredicted RBP19.82■□□□□ 0.76
HCG27-205ENST00000638546 ARID4AP29374 1257 aaPredicted RBP19.82■□□□□ 0.76
HCG27-205ENST00000638546 GSE1Q14687 1217 aa19.82■□□□□ 0.76
HCG27-205ENST00000638546 TTF1Q15361 905 aaPredicted RBP19.82■□□□□ 0.76
HCG27-205ENST00000638546 CCDC102BQ68D86 513 aa19.82■□□□□ 0.76
HCG27-205ENST00000638546 BLOC1S2Q6QNY1 142 aa19.82■□□□□ 0.76
HCG27-205ENST00000638546 ARHGEF1Q92888 912 aaKnown RBP19.82■□□□□ 0.76
HCG27-205ENST00000638546 MCAMP43121 646 aa19.81■□□□□ 0.76
HCG27-205ENST00000638546 SLFNL1Q499Z3 407 aa19.81■□□□□ 0.76
HCG27-205ENST00000638546 ZSCAN25Q6NSZ9 544 aa19.81■□□□□ 0.76
HCG27-205ENST00000638546 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.81■□□□□ 0.76
HCG27-205ENST00000638546 MAST3O60307 1309 aa19.81■□□□□ 0.76
HCG27-205ENST00000638546 DDX60Q8IY21 1712 aaKnown RBP19.8■□□□□ 0.76
HCG27-205ENST00000638546 RPS6KB1P23443 525 aa19.8■□□□□ 0.76
HCG27-205ENST00000638546 PHKA1P46020 1223 aa19.8■□□□□ 0.76
HCG27-205ENST00000638546 M0R2C6 588 aa19.8■□□□□ 0.76
HCG27-205ENST00000638546 ANKRD1Q15327 319 aa19.8■□□□□ 0.76
HCG27-205ENST00000638546 WASHC4Q2M389 1173 aa19.8■□□□□ 0.76
HCG27-205ENST00000638546 TRAPPC3LQ5T215 181 aa19.8■□□□□ 0.76
HCG27-205ENST00000638546 FAM196AQ6ZSG2 479 aa19.8■□□□□ 0.76
HCG27-205ENST00000638546 ANKRD18AQ8IVF6 992 aa19.8■□□□□ 0.76
HCG27-205ENST00000638546 OSBP2Q969R2 916 aa19.8■□□□□ 0.76
HCG27-205ENST00000638546 SH2B1Q9NRF2 756 aaPredicted RBP19.8■□□□□ 0.76
HCG27-205ENST00000638546 LAMB2P55268 1798 aa19.79■□□□□ 0.76
HCG27-205ENST00000638546 SCN7AQ01118 1682 aa19.79■□□□□ 0.76
HCG27-205ENST00000638546 BAG4O95429 457 aaKnown RBP19.79■□□□□ 0.76
HCG27-205ENST00000638546 PI16Q6UXB8 463 aa19.79■□□□□ 0.76
HCG27-205ENST00000638546 APPBP2Q92624 585 aa19.79■□□□□ 0.76
HCG27-205ENST00000638546 TAF6LQ9Y6J9 622 aa19.79■□□□□ 0.76
HCG27-205ENST00000638546 GOLGA6L22H0YM25 854 aa19.78■□□□□ 0.76
HCG27-205ENST00000638546 TRAK2O60296 914 aa19.78■□□□□ 0.76
HCG27-205ENST00000638546 HSPD1P10809 573 aaKnown RBP19.78■□□□□ 0.76
HCG27-205ENST00000638546 RFC4P35249 363 aa19.78■□□□□ 0.76
HCG27-205ENST00000638546 CHRNDQ07001 517 aa19.78■□□□□ 0.76
HCG27-205ENST00000638546 TPTE2Q6XPS3 522 aa19.78■□□□□ 0.76
HCG27-205ENST00000638546 C3orf67Q6ZVT6 689 aa19.78■□□□□ 0.76
HCG27-205ENST00000638546 KRT27Q7Z3Y8 459 aa19.78■□□□□ 0.76
HCG27-205ENST00000638546 NBPF5PQ86XG9 351 aaPredicted RBP19.78■□□□□ 0.76
HCG27-205ENST00000638546 NEK1Q96PY6 1258 aa19.78■□□□□ 0.76
HCG27-205ENST00000638546 ZDHHC9Q9Y397 364 aa19.78■□□□□ 0.76
HCG27-205ENST00000638546 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.78■□□□□ 0.76
HCG27-205ENST00000638546 CYP21A2P08686 494 aa19.77■□□□□ 0.76
HCG27-205ENST00000638546 PKP1Q13835 747 aa19.77■□□□□ 0.76
HCG27-205ENST00000638546 LARP6Q9BRS8 491 aaKnown RBP19.77■□□□□ 0.76
HCG27-205ENST00000638546 LY75O60449 1722 aa19.77■□□□□ 0.76
HCG27-205ENST00000638546 AMIGO3Q86WK7 504 aa19.76■□□□□ 0.75
HCG27-205ENST00000638546 NLRP3Q96P20 1036 aa19.76■□□□□ 0.75
HCG27-205ENST00000638546 PIH1D3Q9NQM4 214 aaKnown RBP19.76■□□□□ 0.75
HCG27-205ENST00000638546 BSDC1Q9NW68 430 aaPredicted RBP19.76■□□□□ 0.75
HCG27-205ENST00000638546 BRD1O95696 1058 aa19.76■□□□□ 0.75
HCG27-205ENST00000638546 ADRA2BP18089 450 aa19.76■□□□□ 0.75
HCG27-205ENST00000638546 ADD2P35612 726 aa19.76■□□□□ 0.75
HCG27-205ENST00000638546 CTNNA3Q9UI47 895 aa19.76■□□□□ 0.75
HCG27-205ENST00000638546 BRWD3Q6RI45 1802 aa19.76■□□□□ 0.75
HCG27-205ENST00000638546 HMGB1P09429 215 aaKnown RBP19.75■□□□□ 0.75
HCG27-205ENST00000638546 UBE3CQ15386 1083 aa19.75■□□□□ 0.75
HCG27-205ENST00000638546 SKOR2Q2VWA4 1001 aaPredicted RBP19.75■□□□□ 0.75
HCG27-205ENST00000638546 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
HCG27-205ENST00000638546 SPATA5Q8NB90 893 aa19.75■□□□□ 0.75
HCG27-205ENST00000638546 LRRC4BQ9NT99 713 aa19.75■□□□□ 0.75
HCG27-205ENST00000638546 SBF2Q86WG5 1849 aa19.74■□□□□ 0.75
HCG27-205ENST00000638546 SNAP23O00161 211 aa19.74■□□□□ 0.75
HCG27-205ENST00000638546 PHF14O94880 888 aa19.74■□□□□ 0.75
HCG27-205ENST00000638546 LARGE1O95461 756 aa19.74■□□□□ 0.75
HCG27-205ENST00000638546 SMC3Q9UQE7 1217 aa19.74■□□□□ 0.75
HCG27-205ENST00000638546 ME3Q16798 604 aa19.73■□□□□ 0.75
HCG27-205ENST00000638546 SLC9C2Q5TAH2 1124 aa19.73■□□□□ 0.75
HCG27-205ENST00000638546 PUS7LQ9H0K6 701 aaKnown RBP19.73■□□□□ 0.75
HCG27-205ENST00000638546 TPCN1Q9ULQ1 816 aa19.73■□□□□ 0.75
HCG27-205ENST00000638546 C4BP0C0L5 1744 aa19.73■□□□□ 0.75
HCG27-205ENST00000638546 IDH1O75874 414 aaKnown RBP19.73■□□□□ 0.75
HCG27-205ENST00000638546 UBE4AQ14139 1066 aa19.73■□□□□ 0.75
HCG27-205ENST00000638546 CCDC83Q8IWF9 413 aa19.73■□□□□ 0.75
HCG27-205ENST00000638546 MINPP1Q9UNW1 487 aa19.73■□□□□ 0.75
HCG27-205ENST00000638546 EP400Q96L91 3159 aa19.72■□□□□ 0.75
HCG27-205ENST00000638546 WDR33Q9C0J8 1336 aaKnown RBP19.72■□□□□ 0.75
HCG27-205ENST00000638546 ARAP2Q8WZ64 1704 aa19.72■□□□□ 0.75
HCG27-205ENST00000638546 BCAMP50895 628 aa19.72■□□□□ 0.75
HCG27-205ENST00000638546 RASGRF1Q13972 1273 aa19.72■□□□□ 0.75
HCG27-205ENST00000638546 COL9A3Q14050 684 aaPredicted RBP19.72■□□□□ 0.75
HCG27-205ENST00000638546 TOB2Q14106 344 aaPredicted RBP19.72■□□□□ 0.75
HCG27-205ENST00000638546 GPAA1O43292 621 aa19.71■□□□□ 0.75
HCG27-205ENST00000638546 PDE6AP16499 860 aa19.71■□□□□ 0.75
HCG27-205ENST00000638546 HMGB2P26583 209 aaKnown RBP19.71■□□□□ 0.75
HCG27-205ENST00000638546 RPS8P62241 208 aaKnown RBP19.71■□□□□ 0.75
HCG27-205ENST00000638546 STOX1Q6ZVD7 989 aa19.71■□□□□ 0.75
HCG27-205ENST00000638546 CELF1Q92879 486 aaKnown RBP19.71■□□□□ 0.75
HCG27-205ENST00000638546 TCEANC2Q96MN5 208 aa19.71■□□□□ 0.75
HCG27-205ENST00000638546 E7EWF7 191 aa19.7■□□□□ 0.74
HCG27-205ENST00000638546 MAP3K12Q12852 859 aa19.7■□□□□ 0.74
HCG27-205ENST00000638546 MCTP1Q6DN14 999 aa19.7■□□□□ 0.74
HCG27-205ENST00000638546 DHX32Q7L7V1 743 aaKnown RBP19.7■□□□□ 0.74
HCG27-205ENST00000638546 GNL3LQ9NVN8 582 aaKnown RBP19.7■□□□□ 0.74
HCG27-205ENST00000638546 TAF1LQ8IZX4 1826 aa19.7■□□□□ 0.74
HCG27-205ENST00000638546 COL24A1Q17RW2 1714 aa19.7■□□□□ 0.74
HCG27-205ENST00000638546 ZNF532Q9HCE3 1301 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms