RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 RRAGBQ5VZM2 374 aa14.78□□□□□ -0.04
UBE3A-228ENST00000638155 BANK1Q8NDB2 785 aa14.78□□□□□ -0.04
UBE3A-228ENST00000638155 AGTPBP1Q9UPW5 1226 aa14.78□□□□□ -0.04
UBE3A-228ENST00000638155 NOLC1Q14978 699 aaKnown RBP eCLIP14.78□□□□□ -0.04
UBE3A-228ENST00000638155 ADAMTS8Q9UP79 889 aa14.78□□□□□ -0.04
UBE3A-228ENST00000638155 TRMT1LQ7Z2T5 733 aaKnown RBP14.78□□□□□ -0.04
UBE3A-228ENST00000638155 RAP1GDS1P52306 607 aa14.78□□□□□ -0.04
UBE3A-228ENST00000638155 FAM69CQ0P6D2 419 aa14.78□□□□□ -0.04
UBE3A-228ENST00000638155 OSCARQ8IYS5 282 aa14.78□□□□□ -0.04
UBE3A-228ENST00000638155 FAN1Q9Y2M0 1017 aa14.78□□□□□ -0.04
UBE3A-228ENST00000638155 IFIT3O14879 490 aaKnown RBP14.78□□□□□ -0.04
UBE3A-228ENST00000638155 PROSER2Q86WR7 435 aaPredicted RBP14.77□□□□□ -0.04
UBE3A-228ENST00000638155 TNPO1Q92973 898 aaKnown RBP14.77□□□□□ -0.04
UBE3A-228ENST00000638155 MTHFSP49914 203 aa14.77□□□□□ -0.04
UBE3A-228ENST00000638155 TAF12Q16514 161 aa14.77□□□□□ -0.04
UBE3A-228ENST00000638155 ZNF428Q96B54 188 aa14.77□□□□□ -0.04
UBE3A-228ENST00000638155 SIRT1Q96EB6 747 aa14.77□□□□□ -0.04
UBE3A-228ENST00000638155 SPG7Q9UQ90 795 aa14.77□□□□□ -0.04
UBE3A-228ENST00000638155 SMARCA2P51531 1590 aa14.77□□□□□ -0.04
UBE3A-228ENST00000638155 HAUS2Q9NVX0 235 aa14.77□□□□□ -0.04
UBE3A-228ENST00000638155 VPS41P49754 854 aa14.77□□□□□ -0.05
UBE3A-228ENST00000638155 ZSCAN23Q3MJ62 389 aa14.77□□□□□ -0.05
UBE3A-228ENST00000638155 DDX54Q8TDD1 881 aaKnown RBP14.77□□□□□ -0.05
UBE3A-228ENST00000638155 ATP2A3Q93084 1043 aa14.77□□□□□ -0.05
UBE3A-228ENST00000638155 KIF1BPQ96EK5 621 aa14.77□□□□□ -0.05
UBE3A-228ENST00000638155 SOGA1O94964 1423 aa14.77□□□□□ -0.05
UBE3A-228ENST00000638155 KRT3P12035 628 aa14.77□□□□□ -0.05
UBE3A-228ENST00000638155 MCM10Q7L590 875 aa14.77□□□□□ -0.05
UBE3A-228ENST00000638155 AFG3L2Q9Y4W6 797 aa14.77□□□□□ -0.05
UBE3A-228ENST00000638155 NEK11Q8NG66 645 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 CUX1P39880 1505 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 ACTN4O43707 911 aaKnown RBP14.76□□□□□ -0.05
UBE3A-228ENST00000638155 GJB2P29033 226 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 PPFIA1Q13136 1202 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 GUCA1BQ9UMX6 200 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 GABPAQ06546 454 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 RBBP5Q15291 538 aaKnown RBP14.76□□□□□ -0.05
UBE3A-228ENST00000638155 CCDC42Q96M95 316 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 NOC2LQ9Y3T9 749 aaKnown RBP14.76□□□□□ -0.05
UBE3A-228ENST00000638155 BTBD11A6QL63 1104 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 PSMA7O14818 248 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 ANO6Q4KMQ2 910 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 TRIM68Q6AZZ1 485 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 GTF3C6Q969F1 213 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 BMP15O95972 392 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 MX2P20592 715 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 PPP1R21Q6ZMI0 780 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 GOLGA6CA6NDK9 693 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 GOLGA6DP0CG33 693 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 SDCCAG3Q96C92 435 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 ZSCAN16Q9H4T2 348 aaPredicted RBP14.76□□□□□ -0.05
UBE3A-228ENST00000638155 GOLGA6AQ9NYA3 693 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 PPME1Q9Y570 386 aa14.76□□□□□ -0.05
UBE3A-228ENST00000638155 CCT2P78371 535 aaKnown RBP14.76□□□□□ -0.05
UBE3A-228ENST00000638155 TSR2Q969E8 191 aaKnown RBP14.76□□□□□ -0.05
UBE3A-228ENST00000638155 AMOTQ4VCS5 1084 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 GGNBP2Q9H3C7 697 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 PDE4BQ07343 736 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 MICAL1Q8TDZ2 1067 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 PLCB1Q9NQ66 1216 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 CDR2Q01850 454 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 UBXN1Q04323 297 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 GRM1Q13255 1194 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 BICDL1Q6ZP65 573 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 RIOK3O14730 519 aaKnown RBP14.75□□□□□ -0.05
UBE3A-228ENST00000638155 NUTM1Q86Y26 1132 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 PDZD8Q8NEN9 1154 aa14.75□□□□□ -0.05
UBE3A-228ENST00000638155 FYCO1Q9BQS8 1478 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 PHLDB3Q6NSJ2 640 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 MYCBPQ99417 103 aaPredicted RBP14.74□□□□□ -0.05
UBE3A-228ENST00000638155 FAM204AQ9H8W3 233 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 IFIT1P09914 478 aaKnown RBP14.74□□□□□ -0.05
UBE3A-228ENST00000638155 DBN1Q16643 649 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 VSIG1Q86XK7 387 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 CCDC122Q5T0U0 273 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 IL1RAPL2Q9NP60 686 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 RPGRQ92834 1020 aaKnown RBP14.74□□□□□ -0.05
UBE3A-228ENST00000638155 KAT14Q9H8E8 782 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 SLC5A1P13866 664 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 PNMA8AQ86V59 439 aaPredicted RBP14.74□□□□□ -0.05
UBE3A-228ENST00000638155 SMAP1Q8IYB5 467 aaPredicted RBP14.74□□□□□ -0.05
UBE3A-228ENST00000638155 FRMD4BQ9Y2L6 1034 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 METAP2P50579 478 aaKnown RBP eCLIP14.74□□□□□ -0.059e-6■□□□□ 8.1
UBE3A-228ENST00000638155 ABCC8Q09428 1581 aa14.74□□□□□ -0.05
UBE3A-228ENST00000638155 SSFA2P28290 1259 aa14.73□□□□□ -0.05
UBE3A-228ENST00000638155 MCM7P33993 719 aa14.73□□□□□ -0.05
UBE3A-228ENST00000638155 TMEM67Q5HYA8 995 aa14.73□□□□□ -0.05
UBE3A-228ENST00000638155 PANK2Q9BZ23 570 aa14.73□□□□□ -0.05
UBE3A-228ENST00000638155 RASEFQ8IZ41 740 aa14.73□□□□□ -0.05
UBE3A-228ENST00000638155 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
UBE3A-228ENST00000638155 KCNG4Q8TDN1 519 aa14.73□□□□□ -0.05
UBE3A-228ENST00000638155 ATAD2Q6PL18 1390 aa14.73□□□□□ -0.05
UBE3A-228ENST00000638155 HCLS1P14317 486 aaPredicted RBP14.73□□□□□ -0.05
UBE3A-228ENST00000638155 UBL4BQ8N7F7 174 aa14.73□□□□□ -0.05
UBE3A-228ENST00000638155 IARSP41252 1262 aaKnown RBP14.72□□□□□ -0.05
UBE3A-228ENST00000638155 AFMP43652 599 aa14.72□□□□□ -0.05
UBE3A-228ENST00000638155 IRX5P78411 483 aaPredicted RBP14.72□□□□□ -0.05
UBE3A-228ENST00000638155 CROCCP2Q86T23 111 aa14.72□□□□□ -0.05
UBE3A-228ENST00000638155 SPDL1Q96EA4 605 aa14.72□□□□□ -0.05
UBE3A-228ENST00000638155 STARD3NLO95772 234 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms