RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 EPHA1P21709 976 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 SCNN1AP37088 669 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 NLRP12P59046 1061 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 DPYDQ12882 1025 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 COL19A1Q14993 1142 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 SGO2Q562F6 1265 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 ADAMTSL4Q6UY14 1074 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 SPOCD1Q6ZMY3 1216 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 SHISA5Q8N114 240 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 FLCNQ8NFG4 579 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 RUSC1Q9BVN2 902 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 RNF208Q9H0X6 261 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 RASSF4Q9H2L5 321 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 LRFN2Q9ULH4 789 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 HIF3AQ9Y2N7 669 aa3.63□□□□□ -1.83
SCN1A-215ENST00000637285 DBX1A6NMT0 343 aa3.62□□□□□ -1.83
SCN1A-215ENST00000637285 CYP26A1O43174 497 aa3.62□□□□□ -1.83
SCN1A-215ENST00000637285 PTPRAP18433 802 aa3.62□□□□□ -1.83
SCN1A-215ENST00000637285 TRIP4Q15650 581 aaPredicted RBP3.62□□□□□ -1.83
SCN1A-215ENST00000637285 NFKBIBQ15653 356 aa3.62□□□□□ -1.83
SCN1A-215ENST00000637285 PKN1Q16512 942 aa3.62□□□□□ -1.83
SCN1A-215ENST00000637285 CCER1Q8TC90 406 aaPredicted RBP3.62□□□□□ -1.83
SCN1A-215ENST00000637285 MYO19Q96H55 970 aa3.62□□□□□ -1.83
SCN1A-215ENST00000637285 BSDC1Q9NW68 430 aaPredicted RBP3.62□□□□□ -1.83
SCN1A-215ENST00000637285 UBAP1LF5GYI3 381 aa3.61□□□□□ -1.83
SCN1A-215ENST00000637285 RAD21O60216 631 aa3.61□□□□□ -1.83
SCN1A-215ENST00000637285 CRTC2Q53ET0 693 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-215ENST00000637285 TTC39BQ5VTQ0 682 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-215ENST00000637285 C12orf50Q8NA57 414 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-215ENST00000637285 AGBL5Q8NDL9 886 aa3.61□□□□□ -1.83
SCN1A-215ENST00000637285 OR13H1Q8NG92 308 aa3.61□□□□□ -1.83
SCN1A-215ENST00000637285 SLC7A3Q8WY07 619 aa3.61□□□□□ -1.83
SCN1A-215ENST00000637285 BCANQ96GW7 911 aa3.61□□□□□ -1.83
SCN1A-215ENST00000637285 PBX4Q9BYU1 374 aa3.61□□□□□ -1.83
SCN1A-215ENST00000637285 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.61□□□□□ -1.83
SCN1A-215ENST00000637285 TFIP11Q9UBB9 837 aaKnown RBP3.61□□□□□ -1.83
SCN1A-215ENST00000637285 FAM95CA0A1B0GW59 222 aa3.6□□□□□ -1.83
SCN1A-215ENST00000637285 FOXO3O43524 673 aa3.6□□□□□ -1.83
SCN1A-215ENST00000637285 FARP2O94887 1054 aaPredicted RBP3.6□□□□□ -1.83
SCN1A-215ENST00000637285 PAPLNO95428 1278 aa3.6□□□□□ -1.83
SCN1A-215ENST00000637285 CABP4P57796 275 aa3.6□□□□□ -1.83
SCN1A-215ENST00000637285 PTK7Q13308 1070 aa3.6□□□□□ -1.83
SCN1A-215ENST00000637285 PAOXQ6QHF9 649 aa3.6□□□□□ -1.83
SCN1A-215ENST00000637285 NCAPG2Q86XI2 1143 aa3.6□□□□□ -1.83
SCN1A-215ENST00000637285 POP1Q99575 1024 aaKnown RBP3.6□□□□□ -1.83
SCN1A-215ENST00000637285 METTL22Q9BUU2 404 aaPredicted RBP3.6□□□□□ -1.83
SCN1A-215ENST00000637285 ZMYND15Q9H091 742 aa3.6□□□□□ -1.83
SCN1A-215ENST00000637285 LRRC4CQ9HCJ2 640 aa3.6□□□□□ -1.83
SCN1A-215ENST00000637285 PAK6Q9NQU5 681 aaPredicted RBP3.6□□□□□ -1.83
SCN1A-215ENST00000637285 A6NJR5 290 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 H3BRJ5 948 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 ZNF865P0CJ78 1059 aaPredicted RBP3.59□□□□□ -1.83
SCN1A-215ENST00000637285 WEE1P30291 646 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 ADMP35318 185 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 USP11P51784 963 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 PIP4K2BP78356 416 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 CPSF6Q16630 551 aaKnown RBP eCLIP3.59□□□□□ -1.83
SCN1A-215ENST00000637285 COX20Q5RI15 118 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 NUTM2GQ5VZR2 741 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 ANKMY2Q8IV38 441 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 KSR1Q8IVT5 923 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 ETFBKMTQ8IXQ9 262 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 FBLIM1Q8WUP2 373 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 TBC1D32Q96NH3 1257 aa3.59□□□□□ -1.83
SCN1A-215ENST00000637285 MAFBQ9Y5Q3 323 aaPredicted RBP3.59□□□□□ -1.83
SCN1A-215ENST00000637285 FAM170BA6NMN3 283 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 BIN1O00499 593 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 CYP2E1P05181 493 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-215ENST00000637285 PLCL1Q15111 1095 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 TMEM132AQ24JP5 1023 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 HGSNATQ68CP4 663 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 PIK3R5Q8WYR1 880 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 WNT8BQ93098 351 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 USP26Q9BXU7 913 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 ADAM19Q9H013 955 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 OSGEPQ9NPF4 335 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-215ENST00000637285 CARMIL2Q6F5E8 1435 aa3.58□□□□□ -1.84
SCN1A-215ENST00000637285 MEGF11A6BM72 1044 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L15C9J2P7 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L10C9JJH3 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L13C9JLJ4 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L12C9JPN9 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L11C9JVI0 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L21D6R901 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L18D6R9N7 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L22D6RA61 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L17D6RBQ6 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L19D6RCP7 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L20D6RJB6 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 DRD2P14416 443 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 ARL4DP49703 201 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 USP17L24Q0WX57 530 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 ZNF792Q3KQV3 632 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 DUSP27Q5VZP5 1158 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 CDPF1Q6NVV7 123 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 ZNF574Q6ZN55 896 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms