RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CCDC39Q9UFE4 941 aa14.32□□□□□ -0.12
CLN8-212ENST00000637083 TRMT112Q9UI30 125 aaKnown RBP14.32□□□□□ -0.12
CLN8-212ENST00000637083 RIPOR2Q9Y4F9 1068 aa14.32□□□□□ -0.12
CLN8-212ENST00000637083 E7EWF7 191 aa14.31□□□□□ -0.12
CLN8-212ENST00000637083 MCM5P33992 734 aa14.31□□□□□ -0.12
CLN8-212ENST00000637083 EXOSC10Q01780 885 aaKnown RBP14.31□□□□□ -0.12
CLN8-212ENST00000637083 SMARCC2Q8TAQ2 1214 aa14.31□□□□□ -0.12
CLN8-212ENST00000637083 ANKRD36CQ5JPF3 1778 aa14.31□□□□□ -0.12
CLN8-212ENST00000637083 ADAMTS2O95450 1211 aa14.31□□□□□ -0.12
CLN8-212ENST00000637083 CHGBP05060 677 aa14.31□□□□□ -0.12
CLN8-212ENST00000637083 GPTP24298 496 aa14.31□□□□□ -0.12
CLN8-212ENST00000637083 DZIP3Q86Y13 1208 aaKnown RBP14.31□□□□□ -0.12
CLN8-212ENST00000637083 CFAP45Q9UL16 551 aa14.31□□□□□ -0.12
CLN8-212ENST00000637083 TCHHQ07283 1943 aa14.3□□□□□ -0.12
CLN8-212ENST00000637083 UQCRFS1P1P0C7P4 283 aa14.3□□□□□ -0.12
CLN8-212ENST00000637083 STOX1Q6ZVD7 989 aa14.3□□□□□ -0.12
CLN8-212ENST00000637083 SYNE4Q8N205 404 aa14.3□□□□□ -0.12
CLN8-212ENST00000637083 RNF214Q8ND24 703 aa14.3□□□□□ -0.12
CLN8-212ENST00000637083 SPATA32Q96LK8 384 aa14.3□□□□□ -0.12
CLN8-212ENST00000637083 ZBTB1Q9Y2K1 713 aa14.3□□□□□ -0.12
CLN8-212ENST00000637083 M0R2C6 588 aa14.29□□□□□ -0.12
CLN8-212ENST00000637083 ADORA1P30542 326 aa14.29□□□□□ -0.12
CLN8-212ENST00000637083 NAA16Q6N069 864 aaPredicted RBP14.29□□□□□ -0.12
CLN8-212ENST00000637083 CCDC85AQ96PX6 553 aaPredicted RBP14.29□□□□□ -0.12
CLN8-212ENST00000637083 MROH5Q6ZUA9 1318 aa14.29□□□□□ -0.12
CLN8-212ENST00000637083 ZAP70P43403 619 aa14.29□□□□□ -0.12
CLN8-212ENST00000637083 SCRN1Q12765 414 aa14.29□□□□□ -0.12
CLN8-212ENST00000637083 COL9A3Q14050 684 aaPredicted RBP14.29□□□□□ -0.12
CLN8-212ENST00000637083 ATL3Q6DD88 541 aa14.29□□□□□ -0.12
CLN8-212ENST00000637083 FERMT3Q86UX7 667 aa14.29□□□□□ -0.12
CLN8-212ENST00000637083 ZNF34Q8IZ26 560 aa14.29□□□□□ -0.12
CLN8-212ENST00000637083 OSBP2Q969R2 916 aa14.29□□□□□ -0.12
CLN8-212ENST00000637083 GREM2Q9H772 168 aa14.29□□□□□ -0.12
CLN8-212ENST00000637083 NOL7Q9UMY1 257 aaKnown RBP14.29□□□□□ -0.12
CLN8-212ENST00000637083 ROBO1Q9Y6N7 1651 aa14.28□□□□□ -0.12
CLN8-212ENST00000637083 RIC1Q4ADV7 1423 aa14.28□□□□□ -0.12
CLN8-212ENST00000637083 SPATA31A1Q5TZJ5 1347 aa14.28□□□□□ -0.12
CLN8-212ENST00000637083 DHX16O60231 1041 aaKnown RBP14.28□□□□□ -0.12
CLN8-212ENST00000637083 TTC6Q86TZ1 520 aa14.28□□□□□ -0.12
CLN8-212ENST00000637083 WDR19Q8NEZ3 1342 aa14.27□□□□□ -0.12
CLN8-212ENST00000637083 WNK3Q9BYP7 1800 aa14.27□□□□□ -0.12
CLN8-212ENST00000637083 PDE8BO95263 885 aa14.27□□□□□ -0.12
CLN8-212ENST00000637083 DDB1Q16531 1140 aa14.27□□□□□ -0.12
CLN8-212ENST00000637083 DDX19AQ9NUU7 478 aaKnown RBP14.27□□□□□ -0.12
CLN8-212ENST00000637083 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.12
CLN8-212ENST00000637083 CCDC192P0DO97 292 aa14.27□□□□□ -0.13
CLN8-212ENST00000637083 EVCP57679 992 aa14.27□□□□□ -0.13
CLN8-212ENST00000637083 APOBRQ0VD83 1088 aa14.27□□□□□ -0.13
CLN8-212ENST00000637083 PARP10Q53GL7 1025 aa14.27□□□□□ -0.13
CLN8-212ENST00000637083 NSUN7Q8NE18 718 aaKnown RBP14.27□□□□□ -0.13
CLN8-212ENST00000637083 NCOA7Q8NI08 942 aa14.27□□□□□ -0.13
CLN8-212ENST00000637083 LPIN2Q92539 896 aa14.27□□□□□ -0.13
CLN8-212ENST00000637083 NUP62CLQ9H1M0 184 aa14.27□□□□□ -0.13
CLN8-212ENST00000637083 COL16A1Q07092 1604 aaPredicted RBP14.27□□□□□ -0.13
CLN8-212ENST00000637083 ZNF213O14771 459 aa14.26□□□□□ -0.13
CLN8-212ENST00000637083 JAK2O60674 1132 aa14.26□□□□□ -0.13
CLN8-212ENST00000637083 RESTQ13127 1097 aa14.26□□□□□ -0.13
CLN8-212ENST00000637083 UBE3CQ15386 1083 aa14.26□□□□□ -0.13
CLN8-212ENST00000637083 RALYLQ86SE5 291 aaKnown RBP14.26□□□□□ -0.13
CLN8-212ENST00000637083 CCDC87Q9NVE4 849 aa14.26□□□□□ -0.13
CLN8-212ENST00000637083 MYH3P11055 1940 aa14.26□□□□□ -0.13
CLN8-212ENST00000637083 PTPDC1A2A3K4 754 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 PTMAP06454 111 aaKnown RBP14.25□□□□□ -0.13
CLN8-212ENST00000637083 EIF5P55010 431 aaKnown RBP14.25□□□□□ -0.13
CLN8-212ENST00000637083 TRDNQ13061 729 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 PUM3Q15397 648 aaKnown RBP14.25□□□□□ -0.13
CLN8-212ENST00000637083 MAP3K11Q16584 847 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 SLFNL1Q499Z3 407 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 VGLL2Q8N8G2 317 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 LEO1Q8WVC0 666 aaPredicted RBP14.25□□□□□ -0.13
CLN8-212ENST00000637083 ZNF396Q96N95 335 aaPredicted RBP14.25□□□□□ -0.13
CLN8-212ENST00000637083 LRRC2Q9BYS8 371 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 GPAA1O43292 621 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 FGAP02671 866 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 ARID4AP29374 1257 aaPredicted RBP14.25□□□□□ -0.13
CLN8-212ENST00000637083 PDIA3P30101 505 aaKnown RBP14.25□□□□□ -0.13
CLN8-212ENST00000637083 ADD2P35612 726 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 MARCH10Q8NA82 808 aaPredicted RBP14.25□□□□□ -0.13
CLN8-212ENST00000637083 RGS22Q8NE09 1264 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 DDX11Q96FC9 970 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 ZKSCAN5Q9Y2L8 839 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 LAMA4Q16363 1823 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 LTBP4Q8N2S1 1624 aa14.25□□□□□ -0.13
CLN8-212ENST00000637083 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.25□□□□□ -0.13
CLN8-212ENST00000637083 NUP98P52948 1817 aa14.24□□□□□ -0.13
CLN8-212ENST00000637083 NUTM2BA6NNL0 878 aaPredicted RBP14.24□□□□□ -0.13
CLN8-212ENST00000637083 NUTM2EB1AL46 878 aaPredicted RBP14.24□□□□□ -0.13
CLN8-212ENST00000637083 SLC5A1P13866 664 aa14.24□□□□□ -0.13
CLN8-212ENST00000637083 MCAMP43121 646 aa14.24□□□□□ -0.13
CLN8-212ENST00000637083 SCARF1Q14162 830 aa14.24□□□□□ -0.13
CLN8-212ENST00000637083 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
CLN8-212ENST00000637083 NUTM2AQ8IVF1 878 aaPredicted RBP14.24□□□□□ -0.13
CLN8-212ENST00000637083 FUCA2Q9BTY2 467 aa14.24□□□□□ -0.13
CLN8-212ENST00000637083 UTP14AQ9BVJ6 771 aaKnown RBP14.24□□□□□ -0.13
CLN8-212ENST00000637083 NAP1L2Q9ULW6 460 aaPredicted RBP14.24□□□□□ -0.13
CLN8-212ENST00000637083 ATRNO75882 1429 aa14.24□□□□□ -0.13
CLN8-212ENST00000637083 ZNF500O60304 480 aaPredicted RBP14.24□□□□□ -0.13
CLN8-212ENST00000637083 HCLS1P14317 486 aaPredicted RBP14.24□□□□□ -0.13
CLN8-212ENST00000637083 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
CLN8-212ENST00000637083 INTS5Q6P9B9 1019 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms