RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 PTPDC1A2A3K4 754 aa18.89■□□□□ 0.62
CHRNA7-221ENST00000636898 CTDNEP1O95476 244 aa18.89■□□□□ 0.62
CHRNA7-221ENST00000636898 ADD1P35611 737 aaKnown RBP18.89■□□□□ 0.62
CHRNA7-221ENST00000636898 TRIM28Q13263 835 aaKnown RBP18.89■□□□□ 0.62
CHRNA7-221ENST00000636898 MYRIPQ8NFW9 859 aa18.89■□□□□ 0.62
CHRNA7-221ENST00000636898 KIAA1524Q8TCG1 905 aa18.89■□□□□ 0.62
CHRNA7-221ENST00000636898 CBX8Q9HC52 389 aa18.89■□□□□ 0.62
CHRNA7-221ENST00000636898 CEP126Q9P2H0 1117 aa18.89■□□□□ 0.62
CHRNA7-221ENST00000636898 RCOR1Q9UKL0 485 aa18.89■□□□□ 0.62
CHRNA7-221ENST00000636898 APOBRQ0VD83 1088 aa18.89■□□□□ 0.61
CHRNA7-221ENST00000636898 MTERF4Q7Z6M4 381 aaKnown RBP18.89■□□□□ 0.61
CHRNA7-221ENST00000636898 TDRD7Q8NHU6 1098 aaKnown RBP18.89■□□□□ 0.61
CHRNA7-221ENST00000636898 ZNF594Q96JF6 807 aaPredicted RBP18.89■□□□□ 0.61
CHRNA7-221ENST00000636898 CARD10Q9BWT7 1032 aa18.89■□□□□ 0.61
CHRNA7-221ENST00000636898 AKAP2Q9Y2D5 859 aa18.89■□□□□ 0.61
CHRNA7-221ENST00000636898 ABCC12Q96J65 1359 aa18.89■□□□□ 0.61
CHRNA7-221ENST00000636898 ZFYP08048 801 aaPredicted RBP18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 PRKCSHP14314 528 aaPredicted RBP18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 IL2RBP14784 551 aa18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 EVCP57679 992 aa18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 LUZP1Q86V48 1076 aa18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 KCNF1Q9H3M0 494 aa18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 CTAGE5O15320 804 aa18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 CCDC57Q2TAC2 916 aa18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 CCDC158Q5M9N0 1113 aa18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 CTNNA3Q9UI47 895 aa18.88■□□□□ 0.61
CHRNA7-221ENST00000636898 PDIA3P30101 505 aaKnown RBP18.87■□□□□ 0.61
CHRNA7-221ENST00000636898 TCIRG1Q13488 830 aa18.87■□□□□ 0.61
CHRNA7-221ENST00000636898 SLFNL1Q499Z3 407 aa18.87■□□□□ 0.61
CHRNA7-221ENST00000636898 BRINP3Q76B58 766 aa18.87■□□□□ 0.61
CHRNA7-221ENST00000636898 ZNF396Q96N95 335 aaPredicted RBP18.87■□□□□ 0.61
CHRNA7-221ENST00000636898 PLA2G12BQ9BX93 195 aa18.87■□□□□ 0.61
CHRNA7-221ENST00000636898 XIRP1Q702N8 1843 aaKnown RBP18.86■□□□□ 0.61
CHRNA7-221ENST00000636898 M0R2C6 588 aa18.86■□□□□ 0.61
CHRNA7-221ENST00000636898 GTF2F1P35269 517 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHRNA7-221ENST00000636898 ZNF165P49910 485 aa18.86■□□□□ 0.61
CHRNA7-221ENST00000636898 PUS3Q9BZE2 481 aaKnown RBP18.86■□□□□ 0.61
CHRNA7-221ENST00000636898 PLA2G4DQ86XP0 818 aa18.85■□□□□ 0.61
CHRNA7-221ENST00000636898 SPC24Q8NBT2 197 aa18.85■□□□□ 0.61
CHRNA7-221ENST00000636898 OSBP2Q969R2 916 aa18.85■□□□□ 0.61
CHRNA7-221ENST00000636898 TTC39AQ5SRH9 613 aa18.85■□□□□ 0.61
CHRNA7-221ENST00000636898 FAM13BQ9NYF5 915 aa18.85■□□□□ 0.61
CHRNA7-221ENST00000636898 SOS2Q07890 1332 aaPredicted RBP18.84■□□□□ 0.61
CHRNA7-221ENST00000636898 PCCAP05165 728 aaPredicted RBP18.84■□□□□ 0.61
CHRNA7-221ENST00000636898 CCT2P78371 535 aaKnown RBP18.84■□□□□ 0.61
CHRNA7-221ENST00000636898 RBM10P98175 930 aaKnown RBP18.84■□□□□ 0.61
CHRNA7-221ENST00000636898 XAGE2Q96GT9 111 aa18.84■□□□□ 0.61
CHRNA7-221ENST00000636898 TEX13AQ9BXU3 409 aaPredicted RBP18.84■□□□□ 0.61
CHRNA7-221ENST00000636898 CARMIL3Q8ND23 1372 aa18.84■□□□□ 0.61
CHRNA7-221ENST00000636898 NWD2Q9ULI1 1742 aa18.83■□□□□ 0.61
CHRNA7-221ENST00000636898 CSF1RP07333 972 aa18.83■□□□□ 0.61
CHRNA7-221ENST00000636898 ZNF75DP51815 510 aa18.83■□□□□ 0.61
CHRNA7-221ENST00000636898 FKBP4Q02790 459 aaKnown RBP eCLIP18.83■□□□□ 0.61
CHRNA7-221ENST00000636898 IMMTQ16891 758 aaKnown RBP18.83■□□□□ 0.61
CHRNA7-221ENST00000636898 GORABQ5T7V8 394 aa18.83■□□□□ 0.61
CHRNA7-221ENST00000636898 VSIG10Q8N0Z9 540 aa18.83■□□□□ 0.61
CHRNA7-221ENST00000636898 C17orf53Q8N3J3 647 aaPredicted RBP18.83■□□□□ 0.61
CHRNA7-221ENST00000636898 PYCARDQ9ULZ3 195 aa18.83■□□□□ 0.61
CHRNA7-221ENST00000636898 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.6
CHRNA7-221ENST00000636898 A0A0G2JLW4 131 aa18.83■□□□□ 0.6
CHRNA7-221ENST00000636898 CCAR1Q8IX12 1150 aaKnown RBP18.83■□□□□ 0.6
CHRNA7-221ENST00000636898 DNAJC25Q9H1X3 360 aa18.83■□□□□ 0.6
CHRNA7-221ENST00000636898 NCOA5Q9HCD5 579 aaKnown RBP18.83■□□□□ 0.6
CHRNA7-221ENST00000636898 ABCA3Q99758 1704 aa18.83■□□□□ 0.6
CHRNA7-221ENST00000636898 CCDC73Q6ZRK6 1079 aa18.82■□□□□ 0.6
CHRNA7-221ENST00000636898 APPBP2Q92624 585 aa18.82■□□□□ 0.6
CHRNA7-221ENST00000636898 USP28Q96RU2 1077 aa18.82■□□□□ 0.6
CHRNA7-221ENST00000636898 DDX60Q8IY21 1712 aaKnown RBP18.82■□□□□ 0.6
CHRNA7-221ENST00000636898 MYH7P12883 1935 aa18.82■□□□□ 0.6
CHRNA7-221ENST00000636898 FOXP2O15409 715 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 DHX16O60231 1041 aaKnown RBP18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 CDC25BP30305 580 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 SNW1Q13573 536 aaKnown RBP18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 TTLL5Q6EMB2 1281 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 KIF6Q6ZMV9 814 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 ZBTB38Q8NAP3 1195 aaPredicted RBP18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 TRIM5Q9C035 493 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 ADORA1P30542 326 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 CEBPZQ03701 1054 aaKnown RBP18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 FAM160A1Q05DH4 1040 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 STX1AQ16623 288 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 SARM1Q6SZW1 724 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 RGS22Q8NE09 1264 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 TMOD3Q9NYL9 352 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 WDR19Q8NEZ3 1342 aa18.81■□□□□ 0.6
CHRNA7-221ENST00000636898 PTGS1P23219 599 aa18.8■□□□□ 0.6
CHRNA7-221ENST00000636898 IQCB1Q15051 598 aa18.8■□□□□ 0.6
CHRNA7-221ENST00000636898 ILDR1Q86SU0 546 aaPredicted RBP18.8■□□□□ 0.6
CHRNA7-221ENST00000636898 ENGASEQ8NFI3 743 aa18.8■□□□□ 0.6
CHRNA7-221ENST00000636898 CDHR2Q9BYE9 1310 aa18.8■□□□□ 0.6
CHRNA7-221ENST00000636898 KINO60870 393 aaKnown RBP18.8■□□□□ 0.6
CHRNA7-221ENST00000636898 FGAP02671 866 aa18.8■□□□□ 0.6
CHRNA7-221ENST00000636898 FDPSP14324 419 aaKnown RBP18.8■□□□□ 0.6
CHRNA7-221ENST00000636898 WASHC4Q2M389 1173 aa18.8■□□□□ 0.6
CHRNA7-221ENST00000636898 NAP1L2Q9ULW6 460 aaPredicted RBP18.8■□□□□ 0.6
CHRNA7-221ENST00000636898 TAF7LQ5H9L4 462 aa18.79■□□□□ 0.6
CHRNA7-221ENST00000636898 CHST3Q7LGC8 479 aa18.79■□□□□ 0.6
CHRNA7-221ENST00000636898 CCDC186Q7Z3E2 898 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms