RNA–Protein interactions for RNA: ENST00000636850.1

CHRNA7-220, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-220ENST00000636850 USP17L3A6NCW0 530 aa25.82■■□□□ 1.72
CHRNA7-220ENST00000636850 USP17L4A6NCW7 530 aa25.82■■□□□ 1.72
CHRNA7-220ENST00000636850 SNAP23O00161 211 aa25.82■■□□□ 1.72
CHRNA7-220ENST00000636850 TRIM27P14373 513 aa25.82■■□□□ 1.72
CHRNA7-220ENST00000636850 RSBN1LQ6PCB5 846 aaPredicted RBP25.82■■□□□ 1.72
CHRNA7-220ENST00000636850 USP17L1Q7RTZ2 530 aa25.82■■□□□ 1.72
CHRNA7-220ENST00000636850 PLIN1O60240 522 aa25.81■■□□□ 1.72
CHRNA7-220ENST00000636850 ATF7IPQ6VMQ6 1270 aa25.81■■□□□ 1.72
CHRNA7-220ENST00000636850 PUS3Q9BZE2 481 aaKnown RBP25.81■■□□□ 1.72
CHRNA7-220ENST00000636850 IRS2Q9Y4H2 1338 aa25.81■■□□□ 1.72
CHRNA7-220ENST00000636850 INTS3Q68E01 1043 aaKnown RBP25.8■■□□□ 1.72
CHRNA7-220ENST00000636850 DNAJC5GQ8N7S2 189 aa25.8■■□□□ 1.72
CHRNA7-220ENST00000636850 C15orf52Q6ZUT6 534 aaKnown RBP25.79■■□□□ 1.72
CHRNA7-220ENST00000636850 AGBL3Q8NEM8 1001 aa25.79■■□□□ 1.72
CHRNA7-220ENST00000636850 FBXW7Q969H0 707 aa25.79■■□□□ 1.72
CHRNA7-220ENST00000636850 MEIS3Q99687 375 aa25.79■■□□□ 1.72
CHRNA7-220ENST00000636850 CREBZFQ9NS37 354 aa25.79■■□□□ 1.72
CHRNA7-220ENST00000636850 TNNQ9UQP3 1299 aa25.79■■□□□ 1.72
CHRNA7-220ENST00000636850 HIRAP54198 1017 aaPredicted RBP25.78■■□□□ 1.72
CHRNA7-220ENST00000636850 TBC1D10BQ4KMP7 808 aaPredicted RBP25.78■■□□□ 1.72
CHRNA7-220ENST00000636850 SAMD7Q7Z3H4 446 aa25.78■■□□□ 1.72
CHRNA7-220ENST00000636850 HDAC5Q9UQL6 1122 aa25.78■■□□□ 1.72
CHRNA7-220ENST00000636850 MROH5Q6ZUA9 1318 aa25.78■■□□□ 1.72
CHRNA7-220ENST00000636850 ZKSCAN2Q63HK3 967 aa25.77■■□□□ 1.72
CHRNA7-220ENST00000636850 KLHDC4Q8TBB5 520 aa25.77■■□□□ 1.72
CHRNA7-220ENST00000636850 KLRG1Q96E93 195 aa25.77■■□□□ 1.72
CHRNA7-220ENST00000636850 RIPOR2Q9Y4F9 1068 aa25.77■■□□□ 1.72
CHRNA7-220ENST00000636850 LRRFIP2Q9Y608 721 aaKnown RBP25.77■■□□□ 1.72
CHRNA7-220ENST00000636850 EGFRP00533 1210 aa25.76■■□□□ 1.71
CHRNA7-220ENST00000636850 KIF4BQ2VIQ3 1234 aa25.76■■□□□ 1.71
CHRNA7-220ENST00000636850 LRRC24Q50LG9 513 aa25.76■■□□□ 1.71
CHRNA7-220ENST00000636850 DACT2Q5SW24 774 aa25.76■■□□□ 1.71
CHRNA7-220ENST00000636850 STRIP1Q5VSL9 837 aa25.76■■□□□ 1.71
CHRNA7-220ENST00000636850 ZNF804AQ7Z570 1209 aa25.76■■□□□ 1.71
CHRNA7-220ENST00000636850 ZC3H15Q8WU90 426 aaKnown RBP25.76■■□□□ 1.71
CHRNA7-220ENST00000636850 CLUAP1Q96AJ1 413 aa25.76■■□□□ 1.71
CHRNA7-220ENST00000636850 GMLQ99445 158 aa25.76■■□□□ 1.71
CHRNA7-220ENST00000636850 CD209Q9NNX6 404 aa25.76■■□□□ 1.71
CHRNA7-220ENST00000636850 MYH13Q9UKX3 1938 aa25.75■■□□□ 1.71
CHRNA7-220ENST00000636850 ARAP2Q8WZ64 1704 aa25.75■■□□□ 1.71
CHRNA7-220ENST00000636850 MYO3BQ8WXR4 1341 aa25.75■■□□□ 1.71
CHRNA7-220ENST00000636850 METTL24Q5JXM2 366 aa25.75■■□□□ 1.71
CHRNA7-220ENST00000636850 PGAP2Q9UHJ9 254 aa25.75■■□□□ 1.71
CHRNA7-220ENST00000636850 TMEM88BA6NKF7 163 aa25.74■■□□□ 1.71
CHRNA7-220ENST00000636850 TRAF5O00463 557 aa25.74■■□□□ 1.71
CHRNA7-220ENST00000636850 GNAI3P08754 354 aa25.74■■□□□ 1.71
CHRNA7-220ENST00000636850 ZNF280AP59817 542 aaPredicted RBP25.74■■□□□ 1.71
CHRNA7-220ENST00000636850 UBE4AQ14139 1066 aa25.74■■□□□ 1.71
CHRNA7-220ENST00000636850 RBM26Q5T8P6 1007 aaKnown RBP25.74■■□□□ 1.71
CHRNA7-220ENST00000636850 MXD3Q9BW11 206 aa25.74■■□□□ 1.71
CHRNA7-220ENST00000636850 USP17L8P0C7I0 530 aa25.73■■□□□ 1.71
CHRNA7-220ENST00000636850 RFX5P48382 616 aaPredicted RBP25.73■■□□□ 1.71
CHRNA7-220ENST00000636850 GTF2IP78347 998 aa25.73■■□□□ 1.71
CHRNA7-220ENST00000636850 TTLL5Q6EMB2 1281 aa25.72■■□□□ 1.71
CHRNA7-220ENST00000636850 GLIS2Q9BZE0 524 aaPredicted RBP25.72■■□□□ 1.71
CHRNA7-220ENST00000636850 FMR1Q06787 632 aaKnown RBP eCLIP25.71■■□□□ 1.71
CHRNA7-220ENST00000636850 ECM29Q5VYK3 1845 aa25.7■■□□□ 1.71
CHRNA7-220ENST00000636850 EYA2O00167 538 aa25.7■■□□□ 1.7
CHRNA7-220ENST00000636850 IL1R1P14778 569 aa25.7■■□□□ 1.7
CHRNA7-220ENST00000636850 PTPN12Q05209 780 aaKnown RBP25.7■■□□□ 1.7
CHRNA7-220ENST00000636850 TMEM57Q8N5G2 664 aa25.7■■□□□ 1.7
CHRNA7-220ENST00000636850 VGLL2Q8N8G2 317 aa25.7■■□□□ 1.7
CHRNA7-220ENST00000636850 MYOZ2Q9NPC6 264 aa25.7■■□□□ 1.7
CHRNA7-220ENST00000636850 PDE8BO95263 885 aa25.69■■□□□ 1.7
CHRNA7-220ENST00000636850 CDC37L1Q7L3B6 337 aa25.69■■□□□ 1.7
CHRNA7-220ENST00000636850 FTSJ3Q8IY81 847 aaKnown RBP25.69■■□□□ 1.7
CHRNA7-220ENST00000636850 GYG1P46976 350 aa25.68■■□□□ 1.7
CHRNA7-220ENST00000636850 OGFOD1Q8N543 542 aa25.68■■□□□ 1.7
CHRNA7-220ENST00000636850 SIL1Q9H173 461 aa25.68■■□□□ 1.7
CHRNA7-220ENST00000636850 GGA3Q9NZ52 723 aa25.68■■□□□ 1.7
CHRNA7-220ENST00000636850 MKRN1Q9UHC7 482 aaKnown RBP25.68■■□□□ 1.7
CHRNA7-220ENST00000636850 CNTNAP1P78357 1384 aa25.68■■□□□ 1.7
CHRNA7-220ENST00000636850 HIBADHP31937 336 aaKnown RBP25.67■■□□□ 1.7
CHRNA7-220ENST00000636850 DCPSQ96C86 337 aaKnown RBP25.67■■□□□ 1.7
CHRNA7-220ENST00000636850 ASTN2O75129 1339 aaPredicted RBP25.66■■□□□ 1.7
CHRNA7-220ENST00000636850 PUM3Q15397 648 aaKnown RBP25.66■■□□□ 1.7
CHRNA7-220ENST00000636850 KRT26Q7Z3Y9 468 aa25.66■■□□□ 1.7
CHRNA7-220ENST00000636850 KIAA0825Q8IV33 1275 aa25.66■■□□□ 1.7
CHRNA7-220ENST00000636850 FBXO3Q9UK99 471 aa25.66■■□□□ 1.7
CHRNA7-220ENST00000636850 ABT1Q9ULW3 272 aaKnown RBP25.66■■□□□ 1.7
CHRNA7-220ENST00000636850 CIAO1O76071 339 aa25.65■■□□□ 1.7
CHRNA7-220ENST00000636850 GNAI2P04899 355 aa25.65■■□□□ 1.7
CHRNA7-220ENST00000636850 ATG9AQ7Z3C6 839 aa25.65■■□□□ 1.7
CHRNA7-220ENST00000636850 USP48Q86UV5 1035 aa25.65■■□□□ 1.7
CHRNA7-220ENST00000636850 DZIP1LQ8IYY4 767 aaKnown RBP25.65■■□□□ 1.7
CHRNA7-220ENST00000636850 JMYQ8N9B5 988 aa25.65■■□□□ 1.7
CHRNA7-220ENST00000636850 FAM84BQ96KN1 310 aaPredicted RBP25.65■■□□□ 1.7
CHRNA7-220ENST00000636850 JAG2Q9Y219 1238 aa25.65■■□□□ 1.7
CHRNA7-220ENST00000636850 PCNTO95613 3336 aa25.65■■□□□ 1.7
CHRNA7-220ENST00000636850 CELF2O95319 508 aaKnown RBP25.64■■□□□ 1.7
CHRNA7-220ENST00000636850 SCARF1Q14162 830 aa25.64■■□□□ 1.7
CHRNA7-220ENST00000636850 CST9Q5W186 159 aa25.64■■□□□ 1.7
CHRNA7-220ENST00000636850 VPS37DQ86XT2 251 aa25.64■■□□□ 1.7
CHRNA7-220ENST00000636850 CERS5Q8N5B7 392 aa25.64■■□□□ 1.7
CHRNA7-220ENST00000636850 TDRD7Q8NHU6 1098 aaKnown RBP25.64■■□□□ 1.7
CHRNA7-220ENST00000636850 HDAC9Q9UKV0 1011 aa25.64■■□□□ 1.7
CHRNA7-220ENST00000636850 PA2G4Q9UQ80 394 aaKnown RBP25.64■■□□□ 1.7
CHRNA7-220ENST00000636850 ADM5C9JUS6 153 aa25.63■■□□□ 1.69
CHRNA7-220ENST00000636850 SRGAP3O43295 1099 aa25.63■■□□□ 1.69
CHRNA7-220ENST00000636850 RLBP1P12271 317 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms