RNA–Protein interactions for RNA: ENST00000636475.1

PCCA-213, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-213ENST00000636475 MSNP26038 577 aaKnown RBP11.81□□□□□ -0.52
PCCA-213ENST00000636475 MCM5P33992 734 aa11.81□□□□□ -0.52
PCCA-213ENST00000636475 EXOSC10Q01780 885 aaKnown RBP11.81□□□□□ -0.52
PCCA-213ENST00000636475 ZSCAN25Q6NSZ9 544 aa11.81□□□□□ -0.52
PCCA-213ENST00000636475 CDC37L1Q7L3B6 337 aa11.81□□□□□ -0.52
PCCA-213ENST00000636475 SMARCC2Q8TAQ2 1214 aa11.81□□□□□ -0.52
PCCA-213ENST00000636475 CCDC9Q9Y3X0 531 aaKnown RBP11.81□□□□□ -0.52
PCCA-213ENST00000636475 CTSWP56202 376 aa11.81□□□□□ -0.52
PCCA-213ENST00000636475 COL9A3Q14050 684 aaPredicted RBP11.81□□□□□ -0.52
PCCA-213ENST00000636475 STOX1Q6ZVD7 989 aa11.81□□□□□ -0.52
PCCA-213ENST00000636475 TTLL11Q8NHH1 800 aa11.81□□□□□ -0.52
PCCA-213ENST00000636475 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.81□□□□□ -0.52
PCCA-213ENST00000636475 CCDC39Q9UFE4 941 aa11.81□□□□□ -0.52
PCCA-213ENST00000636475 LRP5O75197 1615 aa11.81□□□□□ -0.52
PCCA-213ENST00000636475 AKAP11Q9UKA4 1901 aa11.81□□□□□ -0.52
PCCA-213ENST00000636475 RREB1Q92766 1687 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 E7EWF7 191 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 PDE8AO60658 829 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 FKBP4Q02790 459 aaKnown RBP eCLIP11.8□□□□□ -0.52
PCCA-213ENST00000636475 STK3Q13188 491 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 TTF1Q15361 905 aaPredicted RBP11.8□□□□□ -0.52
PCCA-213ENST00000636475 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 METTL24Q5JXM2 366 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 APPBP2Q92624 585 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 BRF1Q92994 677 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 NOL7Q9UMY1 257 aaKnown RBP11.8□□□□□ -0.52
PCCA-213ENST00000636475 THRAP3Q9Y2W1 955 aaKnown RBP11.8□□□□□ -0.52
PCCA-213ENST00000636475 RIPOR2Q9Y4F9 1068 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 NRAPQ86VF7 1730 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 DDX60Q8IY21 1712 aaKnown RBP11.8□□□□□ -0.52
PCCA-213ENST00000636475 NWD2Q9ULI1 1742 aa11.8□□□□□ -0.52
PCCA-213ENST00000636475 ATRNO75882 1429 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 CHGBP05060 677 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 ITGA6P23229 1130 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 SCRN1Q12765 414 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 HLFQ16534 295 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 IMMTQ16891 758 aaKnown RBP11.79□□□□□ -0.52
PCCA-213ENST00000636475 LDHAL6AQ6ZMR3 332 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 ZNF274Q96GC6 653 aaPredicted RBP11.79□□□□□ -0.52
PCCA-213ENST00000636475 H3BQV1 296 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 M0R2C6 588 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 IRS4O14654 1257 aaPredicted RBP11.79□□□□□ -0.52
PCCA-213ENST00000636475 ADORA1P30542 326 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 NAA16Q6N069 864 aaPredicted RBP11.79□□□□□ -0.52
PCCA-213ENST00000636475 TTC6Q86TZ1 520 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 RNF214Q8ND24 703 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 CFAP45Q9UL16 551 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 ZBTB1Q9Y2K1 713 aa11.79□□□□□ -0.52
PCCA-213ENST00000636475 WDR19Q8NEZ3 1342 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 GOLGA6L4A6NEF3 574 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 RXRBP28702 533 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 EVCP57679 992 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 ATL3Q6DD88 541 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 DZIP3Q86Y13 1208 aaKnown RBP11.78□□□□□ -0.52
PCCA-213ENST00000636475 OSBP2Q969R2 916 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 SPATA32Q96LK8 384 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 SLC4A9Q96Q91 983 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 CNNM1Q9NRU3 951 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 TRMT112Q9UI30 125 aaKnown RBP11.78□□□□□ -0.52
PCCA-213ENST00000636475 KAT6BQ8WYB5 2073 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 LAMB2P55268 1798 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 GPTP24298 496 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 RESTQ13127 1097 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 WASHC4Q2M389 1173 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 FERMT3Q86UX7 667 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 ZNF34Q8IZ26 560 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 NSUN7Q8NE18 718 aaKnown RBP11.78□□□□□ -0.52
PCCA-213ENST00000636475 FUCA2Q9BTY2 467 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 GREM2Q9H772 168 aa11.78□□□□□ -0.52
PCCA-213ENST00000636475 MROH5Q6ZUA9 1318 aa11.77□□□□□ -0.52
PCCA-213ENST00000636475 JAK2O60674 1132 aa11.77□□□□□ -0.53
PCCA-213ENST00000636475 PDE8BO95263 885 aa11.77□□□□□ -0.53
PCCA-213ENST00000636475 UQCRFS1P1P0C7P4 283 aa11.77□□□□□ -0.53
PCCA-213ENST00000636475 CCDC192P0DO97 292 aa11.77□□□□□ -0.53
PCCA-213ENST00000636475 VGLL2Q8N8G2 317 aa11.77□□□□□ -0.53
PCCA-213ENST00000636475 RGS22Q8NE09 1264 aa11.77□□□□□ -0.53
PCCA-213ENST00000636475 DDX19AQ9NUU7 478 aaKnown RBP11.77□□□□□ -0.53
PCCA-213ENST00000636475 DHX16O60231 1041 aaKnown RBP11.76□□□□□ -0.53
PCCA-213ENST00000636475 ZAP70P43403 619 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 LEO1Q8WVC0 666 aaPredicted RBP11.76□□□□□ -0.53
PCCA-213ENST00000636475 SYTL4Q96C24 671 aaPredicted RBP11.76□□□□□ -0.53
PCCA-213ENST00000636475 CCDC85AQ96PX6 553 aaPredicted RBP11.76□□□□□ -0.53
PCCA-213ENST00000636475 NUP62CLQ9H1M0 184 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 ZKSCAN5Q9Y2L8 839 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 SALL1Q9NSC2 1324 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 DOCK2Q92608 1830 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 ZNF500O60304 480 aaPredicted RBP11.76□□□□□ -0.53
PCCA-213ENST00000636475 ARID4AP29374 1257 aaPredicted RBP11.76□□□□□ -0.53
PCCA-213ENST00000636475 EIF5P55010 431 aaKnown RBP11.76□□□□□ -0.53
PCCA-213ENST00000636475 APOBRQ0VD83 1088 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 UBE3CQ15386 1083 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 PUM3Q15397 648 aaKnown RBP11.76□□□□□ -0.53
PCCA-213ENST00000636475 MAP3K11Q16584 847 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 SLFNL1Q499Z3 407 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 NCOA7Q8NI08 942 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
PCCA-213ENST00000636475 LRRC2Q9BYS8 371 aa11.76□□□□□ -0.53
PCCA-213ENST00000636475 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
PCCA-213ENST00000636475 SPATA31A1Q5TZJ5 1347 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms