RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 CDCA7LQ96GN5 454 aa23.31■■□□□ 1.32
CLN6-214ENST00000636314 XDHP47989 1333 aa23.31■■□□□ 1.32
CLN6-214ENST00000636314 G3V3G9 751 aa23.3■■□□□ 1.32
CLN6-214ENST00000636314 KIF4BQ2VIQ3 1234 aa23.3■■□□□ 1.32
CLN6-214ENST00000636314 DCAF8Q5TAQ9 597 aa23.3■■□□□ 1.32
CLN6-214ENST00000636314 DIEXFQ68CQ4 756 aaKnown RBP23.3■■□□□ 1.32
CLN6-214ENST00000636314 PSME4Q14997 1843 aa23.3■■□□□ 1.32
CLN6-214ENST00000636314 MRPL50Q8N5N7 158 aaKnown RBP23.29■■□□□ 1.32
CLN6-214ENST00000636314 ZC3H12CQ9C0D7 883 aaKnown RBP23.29■■□□□ 1.32
CLN6-214ENST00000636314 FAM155AB1AL88 458 aaPredicted RBP23.28■■□□□ 1.32
CLN6-214ENST00000636314 SLC34A2O95436 690 aa23.28■■□□□ 1.32
CLN6-214ENST00000636314 ITGA6P23229 1130 aa23.28■■□□□ 1.32
CLN6-214ENST00000636314 IGHMBP2P38935 993 aaKnown RBP23.28■■□□□ 1.32
CLN6-214ENST00000636314 ZNF157P51786 506 aaPredicted RBP23.28■■□□□ 1.32
CLN6-214ENST00000636314 BSDC1Q9NW68 430 aaPredicted RBP23.28■■□□□ 1.32
CLN6-214ENST00000636314 GRM8O00222 908 aa23.27■■□□□ 1.32
CLN6-214ENST00000636314 ALDH1L1O75891 902 aa23.27■■□□□ 1.32
CLN6-214ENST00000636314 SULF1Q8IWU6 871 aa23.27■■□□□ 1.32
CLN6-214ENST00000636314 CCDC102AQ96A19 550 aa23.27■■□□□ 1.32
CLN6-214ENST00000636314 SRCIN1Q9C0H9 1055 aa23.27■■□□□ 1.32
CLN6-214ENST00000636314 GGA3Q9NZ52 723 aa23.27■■□□□ 1.32
CLN6-214ENST00000636314 CSF1RP07333 972 aa23.26■■□□□ 1.31
CLN6-214ENST00000636314 ATP2B4P23634 1241 aa23.26■■□□□ 1.31
CLN6-214ENST00000636314 KIF23Q02241 960 aaPredicted RBP23.26■■□□□ 1.31
CLN6-214ENST00000636314 SSH1Q8WYL5 1049 aa23.26■■□□□ 1.31
CLN6-214ENST00000636314 C9orf78Q9NZ63 289 aaPredicted RBP23.26■■□□□ 1.31
CLN6-214ENST00000636314 PTPRCP08575 1304 aa23.26■■□□□ 1.31
CLN6-214ENST00000636314 TNRC18O15417 2968 aaPredicted RBP23.25■■□□□ 1.31
CLN6-214ENST00000636314 VIL1P09327 827 aaKnown RBP23.25■■□□□ 1.31
CLN6-214ENST00000636314 MPHOSPH8Q99549 860 aa23.25■■□□□ 1.31
CLN6-214ENST00000636314 MINPP1Q9UNW1 487 aa23.25■■□□□ 1.31
CLN6-214ENST00000636314 CHMP3Q9Y3E7 222 aa23.25■■□□□ 1.31
CLN6-214ENST00000636314 TRMT2AQ8IZ69 625 aaKnown RBP23.24■■□□□ 1.31
CLN6-214ENST00000636314 MIER1Q8N108 512 aa23.24■■□□□ 1.31
CLN6-214ENST00000636314 SAGE1Q9NXZ1 904 aa23.24■■□□□ 1.31
CLN6-214ENST00000636314 ASTN2O75129 1339 aaPredicted RBP23.24■■□□□ 1.31
CLN6-214ENST00000636314 ANKRD18BA2A2Z9 1011 aa23.23■■□□□ 1.31
CLN6-214ENST00000636314 TRPA1O75762 1119 aa23.23■■□□□ 1.31
CLN6-214ENST00000636314 FOXO4P98177 505 aa23.23■■□□□ 1.31
CLN6-214ENST00000636314 ALDH1L2Q3SY69 923 aa23.23■■□□□ 1.31
CLN6-214ENST00000636314 CDCA5Q96FF9 252 aa23.23■■□□□ 1.31
CLN6-214ENST00000636314 SMC4Q9NTJ3 1288 aa23.23■■□□□ 1.31
CLN6-214ENST00000636314 IFIT5Q13325 482 aaKnown RBP23.22■■□□□ 1.31
CLN6-214ENST00000636314 RNF186Q9NXI6 227 aa23.22■■□□□ 1.31
CLN6-214ENST00000636314 MED23Q9ULK4 1368 aa23.22■■□□□ 1.31
CLN6-214ENST00000636314 A0A1B0GUL6 1792 aa23.22■■□□□ 1.31
CLN6-214ENST00000636314 SLC10A3P09131 477 aa23.21■■□□□ 1.31
CLN6-214ENST00000636314 CT47B1P0C2W7 299 aaPredicted RBP23.21■■□□□ 1.31
CLN6-214ENST00000636314 CCT4P50991 539 aaKnown RBP23.21■■□□□ 1.31
CLN6-214ENST00000636314 RSBN1LQ6PCB5 846 aaPredicted RBP23.21■■□□□ 1.31
CLN6-214ENST00000636314 SCARF1Q14162 830 aa23.2■■□□□ 1.3
CLN6-214ENST00000636314 ANGEL2Q5VTE6 544 aaKnown RBP23.2■■□□□ 1.3
CLN6-214ENST00000636314 LMBR1LQ6UX01 489 aa23.2■■□□□ 1.3
CLN6-214ENST00000636314 ANKRD2Q9GZV1 360 aa23.2■■□□□ 1.3
CLN6-214ENST00000636314 PAPPA2Q9BXP8 1791 aa23.19■■□□□ 1.3
CLN6-214ENST00000636314 EPHA10Q5JZY3 1008 aa23.19■■□□□ 1.3
CLN6-214ENST00000636314 AGBL3Q8NEM8 1001 aa23.19■■□□□ 1.3
CLN6-214ENST00000636314 ZNF280AP59817 542 aaPredicted RBP23.18■■□□□ 1.3
CLN6-214ENST00000636314 CCDC57Q2TAC2 916 aa23.18■■□□□ 1.3
CLN6-214ENST00000636314 TAF7LQ5H9L4 462 aa23.18■■□□□ 1.3
CLN6-214ENST00000636314 CSRNP1Q96S65 589 aa23.18■■□□□ 1.3
CLN6-214ENST00000636314 LEMD3Q9Y2U8 911 aa23.18■■□□□ 1.3
CLN6-214ENST00000636314 ZNF609O15014 1411 aa23.17■■□□□ 1.3
CLN6-214ENST00000636314 WTIPA6NIX2 430 aaPredicted RBP23.17■■□□□ 1.3
CLN6-214ENST00000636314 CHRNDQ07001 517 aa23.17■■□□□ 1.3
CLN6-214ENST00000636314 SUCLG2Q96I99 432 aa23.17■■□□□ 1.3
CLN6-214ENST00000636314 ZNF804BA4D1E1 1349 aa23.16■■□□□ 1.3
CLN6-214ENST00000636314 UTYO14607 1347 aa23.16■■□□□ 1.3
CLN6-214ENST00000636314 NBPF7P0C2Y1 421 aaPredicted RBP23.16■■□□□ 1.3
CLN6-214ENST00000636314 KCNJ4P48050 445 aa23.16■■□□□ 1.3
CLN6-214ENST00000636314 PODNQ7Z5L7 613 aa23.16■■□□□ 1.3
CLN6-214ENST00000636314 RASAL3Q86YV0 1011 aa23.16■■□□□ 1.3
CLN6-214ENST00000636314 MYOZ2Q9NPC6 264 aa23.16■■□□□ 1.3
CLN6-214ENST00000636314 USP17L8P0C7I0 530 aa23.15■■□□□ 1.3
CLN6-214ENST00000636314 SOX10P56693 466 aa23.15■■□□□ 1.3
CLN6-214ENST00000636314 USP17L3A6NCW0 530 aa23.14■■□□□ 1.29
CLN6-214ENST00000636314 USP17L4A6NCW7 530 aa23.14■■□□□ 1.29
CLN6-214ENST00000636314 USP17L1Q7RTZ2 530 aa23.14■■□□□ 1.29
CLN6-214ENST00000636314 REM2Q8IYK8 340 aaPredicted RBP23.14■■□□□ 1.29
CLN6-214ENST00000636314 SCAF8Q9UPN6 1271 aaKnown RBP23.14■■□□□ 1.29
CLN6-214ENST00000636314 ZNF646O15015 1829 aaPredicted RBP23.14■■□□□ 1.29
CLN6-214ENST00000636314 PITPNM2Q9BZ72 1349 aa23.13■■□□□ 1.29
CLN6-214ENST00000636314 ZNF594Q96JF6 807 aaPredicted RBP23.13■■□□□ 1.29
CLN6-214ENST00000636314 GMLQ99445 158 aa23.13■■□□□ 1.29
CLN6-214ENST00000636314 COA1Q9GZY4 146 aa23.13■■□□□ 1.29
CLN6-214ENST00000636314 FKBP1BP68106 108 aa23.12■■□□□ 1.29
CLN6-214ENST00000636314 HNRNPUQ00839 825 aaKnown RBP eCLIP23.12■■□□□ 1.29
CLN6-214ENST00000636314 LDHAL6AQ6ZMR3 332 aa23.12■■□□□ 1.29
CLN6-214ENST00000636314 CTU1Q7Z7A3 348 aaKnown RBP23.12■■□□□ 1.29
CLN6-214ENST00000636314 FBXW7Q969H0 707 aa23.12■■□□□ 1.29
CLN6-214ENST00000636314 KAZALD1Q96I82 304 aa23.12■■□□□ 1.29
CLN6-214ENST00000636314 BICC1Q9H694 974 aaKnown RBP23.12■■□□□ 1.29
CLN6-214ENST00000636314 CNNM1Q9NRU3 951 aa23.12■■□□□ 1.29
CLN6-214ENST00000636314 KLRK1P26718 216 aa23.11■■□□□ 1.29
CLN6-214ENST00000636314 MOB2Q70IA6 237 aa23.11■■□□□ 1.29
CLN6-214ENST00000636314 TXNRD3Q86VQ6 643 aa23.11■■□□□ 1.29
CLN6-214ENST00000636314 HELBQ8NG08 1087 aaPredicted RBP23.11■■□□□ 1.29
CLN6-214ENST00000636314 NOB1Q9ULX3 412 aaKnown RBP23.11■■□□□ 1.29
CLN6-214ENST00000636314 PDE4DIPQ5VU43 2346 aa23.11■■□□□ 1.29
CLN6-214ENST00000636314 TAF5LO75529 589 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms