RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 ST5P78524 1137 aa12.07□□□□□ -0.48
CACNA1A-216ENST00000635742 FKBP4Q02790 459 aaKnown RBP eCLIP12.07□□□□□ -0.48
CACNA1A-216ENST00000635742 PTH1RQ03431 593 aa12.07□□□□□ -0.48
CACNA1A-216ENST00000635742 SLFNL1Q499Z3 407 aa12.07□□□□□ -0.48
CACNA1A-216ENST00000635742 ZNF589Q86UQ0 364 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-216ENST00000635742 SLC51AQ86UW1 340 aa12.07□□□□□ -0.48
CACNA1A-216ENST00000635742 MINPP1Q9UNW1 487 aa12.07□□□□□ -0.48
CACNA1A-216ENST00000635742 CCDC171Q6TFL3 1326 aa12.06□□□□□ -0.48
CACNA1A-216ENST00000635742 DOCK2Q92608 1830 aa12.06□□□□□ -0.48
CACNA1A-216ENST00000635742 WTIPA6NIX2 430 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-216ENST00000635742 RABEP1Q15276 862 aa12.06□□□□□ -0.48
CACNA1A-216ENST00000635742 FLAD1Q8NFF5 587 aa12.06□□□□□ -0.48
CACNA1A-216ENST00000635742 ZNF512BQ96KM6 892 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-216ENST00000635742 MCCP23508 829 aa12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 HSPA4P34932 840 aa12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 KIAA1211Q6ZU35 1233 aa12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 SNX21Q969T3 373 aa12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 SEC62Q99442 399 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 COL11A2P13942 1736 aaPredicted RBP12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 GRAPQ13588 217 aa12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 CRY2Q49AN0 593 aa12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 CCDC129Q6ZRS4 1044 aa12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 HSCBQ8IWL3 235 aa12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 GRAPLQ8TC17 118 aaPredicted RBP12.05□□□□□ -0.48
CACNA1A-216ENST00000635742 CYP2E1P05181 493 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-216ENST00000635742 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
CACNA1A-216ENST00000635742 BCAMP50895 628 aa12.04□□□□□ -0.48
CACNA1A-216ENST00000635742 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
CACNA1A-216ENST00000635742 NLGN1Q8N2Q7 840 aa12.04□□□□□ -0.48
CACNA1A-216ENST00000635742 IL17RAQ96F46 866 aa12.04□□□□□ -0.48
CACNA1A-216ENST00000635742 HMG20BQ9P0W2 317 aa12.04□□□□□ -0.48
CACNA1A-216ENST00000635742 KLRK1P26718 216 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 ANAPC15P60006 121 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 UBE4AQ14139 1066 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 SLC15A2Q16348 729 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 ZMYM1Q5SVZ6 1142 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 DEFB132Q7Z7B7 95 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 PIH1D3Q9NQM4 214 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 LRRC37AA6NMS7 1700 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 MYH13Q9UKX3 1938 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 RNF113AO15541 343 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 MMP10P09238 476 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 STK32BQ9NY57 414 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 RBM8AQ9Y5S9 174 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 ZNF804BA4D1E1 1349 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 MAST3O60307 1309 aa12.03□□□□□ -0.48
CACNA1A-216ENST00000635742 BAG6P46379 1132 aa12.02□□□□□ -0.49
CACNA1A-216ENST00000635742 GYG1P46976 350 aa12.02□□□□□ -0.49
CACNA1A-216ENST00000635742 MCMDC2Q4G0Z9 681 aa12.02□□□□□ -0.49
CACNA1A-216ENST00000635742 TICAM2Q86XR7 235 aa12.02□□□□□ -0.49
CACNA1A-216ENST00000635742 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
CACNA1A-216ENST00000635742 MAP4K1Q92918 833 aa12.02□□□□□ -0.49
CACNA1A-216ENST00000635742 SNX14Q9Y5W7 946 aa12.02□□□□□ -0.49
CACNA1A-216ENST00000635742 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 M0R2C6 588 aa12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 SF3B2Q13435 895 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 PRPF40BQ6NWY9 871 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 SPATA5Q8NB90 893 aa12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 ANKRD2Q9GZV1 360 aa12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 HELLSQ9NRZ9 838 aa12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 LTBP1Q14766 1721 aa12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 KCNJ4P48050 445 aa12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 OSBP2Q969R2 916 aa12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 IQSEC3Q9UPP2 1182 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-216ENST00000635742 CACNA1SQ13698 1873 aa12□□□□□ -0.49
CACNA1A-216ENST00000635742 K7ELQ4 463 aaPredicted RBP12□□□□□ -0.49
CACNA1A-216ENST00000635742 HOXA10P31260 410 aaPredicted RBP12□□□□□ -0.49
CACNA1A-216ENST00000635742 TTF1Q15361 905 aaPredicted RBP12□□□□□ -0.49
CACNA1A-216ENST00000635742 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
CACNA1A-216ENST00000635742 KCNB2Q92953 911 aa12□□□□□ -0.49
CACNA1A-216ENST00000635742 RBM17Q96I25 401 aaKnown RBP12□□□□□ -0.49
CACNA1A-216ENST00000635742 UPF3BQ9BZI7 483 aaKnown RBP12□□□□□ -0.49
CACNA1A-216ENST00000635742 WWC3Q9ULE0 1092 aa12□□□□□ -0.49
CACNA1A-216ENST00000635742 PARP3Q9Y6F1 533 aa12□□□□□ -0.49
CACNA1A-216ENST00000635742 IRS2Q9Y4H2 1338 aa12□□□□□ -0.49
CACNA1A-216ENST00000635742 IDH1O75874 414 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 ZFYP08048 801 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 ADD2P35612 726 aa11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 VPS53Q5VIR6 699 aa11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 CREB3L3Q68CJ9 461 aa11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 APPBP2Q92624 585 aa11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 FAM84BQ96KN1 310 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 BRIP1Q9BX63 1249 aa11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 SLKQ9H2G2 1235 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 TAF6LQ9Y6J9 622 aa11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 SLC27A2O14975 620 aa11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 ST18O60284 1047 aa11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 NEK4P51957 841 aa11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 WASHC4Q2M389 1173 aa11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 LRRFIP1Q32MZ4 808 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 PDGFDQ9GZP0 370 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 PUS7LQ9H0K6 701 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-216ENST00000635742 XDHP47989 1333 aa11.98□□□□□ -0.49
CACNA1A-216ENST00000635742 PDE6AP16499 860 aa11.98□□□□□ -0.49
CACNA1A-216ENST00000635742 ADCK5Q3MIX3 580 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms