RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 RIMBP2O15034 1052 aa23.23■■□□□ 1.31
PNKP-224ENST00000631020 ECE2O60344 883 aa23.23■■□□□ 1.31
PNKP-224ENST00000631020 RFX5P48382 616 aaPredicted RBP23.23■■□□□ 1.31
PNKP-224ENST00000631020 ATP8B2P98198 1209 aa23.23■■□□□ 1.31
PNKP-224ENST00000631020 IFIT5Q13325 482 aaKnown RBP23.23■■□□□ 1.31
PNKP-224ENST00000631020 CEP85Q6P2H3 762 aa23.23■■□□□ 1.31
PNKP-224ENST00000631020 RPS12P25398 132 aaKnown RBP23.23■■□□□ 1.31
PNKP-224ENST00000631020 CCDC57Q2TAC2 916 aa23.23■■□□□ 1.31
PNKP-224ENST00000631020 ZC3H15Q8WU90 426 aaKnown RBP23.23■■□□□ 1.31
PNKP-224ENST00000631020 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
PNKP-224ENST00000631020 PGAP2Q9UHJ9 254 aa23.23■■□□□ 1.31
PNKP-224ENST00000631020 SCN9AQ15858 1988 aa23.22■■□□□ 1.31
PNKP-224ENST00000631020 TRPM7Q96QT4 1865 aa23.22■■□□□ 1.31
PNKP-224ENST00000631020 ANKRD18BA2A2Z9 1011 aa23.22■■□□□ 1.31
PNKP-224ENST00000631020 ATP2B4P23634 1241 aa23.22■■□□□ 1.31
PNKP-224ENST00000631020 SIRT2Q8IXJ6 389 aa23.22■■□□□ 1.31
PNKP-224ENST00000631020 ZNF609O15014 1411 aa23.21■■□□□ 1.31
PNKP-224ENST00000631020 CNTNAP1P78357 1384 aa23.21■■□□□ 1.31
PNKP-224ENST00000631020 PSMD14O00487 310 aa23.21■■□□□ 1.31
PNKP-224ENST00000631020 SRGAP3O43295 1099 aa23.21■■□□□ 1.31
PNKP-224ENST00000631020 KLHDC4Q8TBB5 520 aa23.21■■□□□ 1.31
PNKP-224ENST00000631020 CNOT7Q9UIV1 285 aaKnown RBP23.21■■□□□ 1.31
PNKP-224ENST00000631020 MINPP1Q9UNW1 487 aa23.21■■□□□ 1.31
PNKP-224ENST00000631020 PCDHB15Q9Y5E8 787 aa23.21■■□□□ 1.31
PNKP-224ENST00000631020 H7C1D1 291 aa23.2■■□□□ 1.3
PNKP-224ENST00000631020 IGHMBP2P38935 993 aaKnown RBP23.19■■□□□ 1.3
PNKP-224ENST00000631020 PTPN12Q05209 780 aaKnown RBP23.19■■□□□ 1.3
PNKP-224ENST00000631020 POLA2Q14181 598 aa23.19■■□□□ 1.3
PNKP-224ENST00000631020 DOK7Q18PE1 504 aa23.19■■□□□ 1.3
PNKP-224ENST00000631020 RPAP2Q8IXW5 612 aaPredicted RBP23.19■■□□□ 1.3
PNKP-224ENST00000631020 SSH3Q8TE77 659 aa23.19■■□□□ 1.3
PNKP-224ENST00000631020 MED23Q9ULK4 1368 aa23.19■■□□□ 1.3
PNKP-224ENST00000631020 G3V3G9 751 aa23.18■■□□□ 1.3
PNKP-224ENST00000631020 DCAF8Q5TAQ9 597 aa23.18■■□□□ 1.3
PNKP-224ENST00000631020 GPR101Q96P66 508 aaPredicted RBP23.18■■□□□ 1.3
PNKP-224ENST00000631020 VIL1P09327 827 aaKnown RBP23.18■■□□□ 1.3
PNKP-224ENST00000631020 MICALL2Q8IY33 904 aa23.18■■□□□ 1.3
PNKP-224ENST00000631020 PA2G4Q9UQ80 394 aaKnown RBP23.18■■□□□ 1.3
PNKP-224ENST00000631020 AAMPQ13685 434 aa23.17■■□□□ 1.3
PNKP-224ENST00000631020 PODNQ7Z5L7 613 aa23.17■■□□□ 1.3
PNKP-224ENST00000631020 PUS3Q9BZE2 481 aaKnown RBP23.17■■□□□ 1.3
PNKP-224ENST00000631020 MKRN1Q9UHC7 482 aaKnown RBP23.17■■□□□ 1.3
PNKP-224ENST00000631020 ZBTB12Q9Y330 459 aaPredicted RBP23.17■■□□□ 1.3
PNKP-224ENST00000631020 RASSF10A6NK89 507 aa23.16■■□□□ 1.3
PNKP-224ENST00000631020 MPHOSPH8Q99549 860 aa23.16■■□□□ 1.3
PNKP-224ENST00000631020 ANKRD2Q9GZV1 360 aa23.16■■□□□ 1.3
PNKP-224ENST00000631020 LEMD3Q9Y2U8 911 aa23.16■■□□□ 1.3
PNKP-224ENST00000631020 HIRAP54198 1017 aaPredicted RBP23.15■■□□□ 1.3
PNKP-224ENST00000631020 TAF7LQ5H9L4 462 aa23.15■■□□□ 1.3
PNKP-224ENST00000631020 LDHAL6AQ6ZMR3 332 aa23.15■■□□□ 1.3
PNKP-224ENST00000631020 TRPM4Q8TD43 1214 aa23.15■■□□□ 1.3
PNKP-224ENST00000631020 COPRSQ9NQ92 184 aa23.15■■□□□ 1.3
PNKP-224ENST00000631020 KCNQ5Q9NR82 932 aa23.15■■□□□ 1.3
PNKP-224ENST00000631020 LRRC24Q50LG9 513 aa23.14■■□□□ 1.3
PNKP-224ENST00000631020 AGBL3Q8NEM8 1001 aa23.13■■□□□ 1.29
PNKP-224ENST00000631020 RIPOR2Q9Y4F9 1068 aa23.13■■□□□ 1.29
PNKP-224ENST00000631020 SIL1Q9H173 461 aa23.13■■□□□ 1.29
PNKP-224ENST00000631020 SHTN1A0MZ66 631 aa23.12■■□□□ 1.29
PNKP-224ENST00000631020 EYA2O00167 538 aa23.12■■□□□ 1.29
PNKP-224ENST00000631020 RSBN1LQ6PCB5 846 aaPredicted RBP23.12■■□□□ 1.29
PNKP-224ENST00000631020 CDC37L1Q7L3B6 337 aa23.12■■□□□ 1.29
PNKP-224ENST00000631020 ATG9AQ7Z3C6 839 aa23.12■■□□□ 1.29
PNKP-224ENST00000631020 A0A1B0GUL6 1792 aa23.12■■□□□ 1.29
PNKP-224ENST00000631020 DEFB115Q30KQ5 88 aa23.11■■□□□ 1.29
PNKP-224ENST00000631020 COA1Q9GZY4 146 aa23.11■■□□□ 1.29
PNKP-224ENST00000631020 CNNM1Q9NRU3 951 aa23.11■■□□□ 1.29
PNKP-224ENST00000631020 ZNF646O15015 1829 aaPredicted RBP23.11■■□□□ 1.29
PNKP-224ENST00000631020 USP17L3A6NCW0 530 aa23.1■■□□□ 1.29
PNKP-224ENST00000631020 USP17L4A6NCW7 530 aa23.1■■□□□ 1.29
PNKP-224ENST00000631020 TRAF5O00463 557 aa23.1■■□□□ 1.29
PNKP-224ENST00000631020 NEFLP07196 543 aa23.1■■□□□ 1.29
PNKP-224ENST00000631020 VEGFBP49765 207 aa23.1■■□□□ 1.29
PNKP-224ENST00000631020 CST9Q5W186 159 aa23.1■■□□□ 1.29
PNKP-224ENST00000631020 USP17L1Q7RTZ2 530 aa23.1■■□□□ 1.29
PNKP-224ENST00000631020 SAMD7Q7Z3H4 446 aa23.1■■□□□ 1.29
PNKP-224ENST00000631020 ZNF804BA4D1E1 1349 aa23.1■■□□□ 1.29
PNKP-224ENST00000631020 HMMRO75330 724 aa23.09■■□□□ 1.29
PNKP-224ENST00000631020 HSPA1AP0DMV8 641 aaKnown RBP23.09■■□□□ 1.29
PNKP-224ENST00000631020 HSPA1BP0DMV9 641 aaKnown RBP23.09■■□□□ 1.29
PNKP-224ENST00000631020 ZNF280AP59817 542 aaPredicted RBP23.09■■□□□ 1.29
PNKP-224ENST00000631020 CHRNDQ07001 517 aa23.09■■□□□ 1.29
PNKP-224ENST00000631020 GMLQ99445 158 aa23.09■■□□□ 1.29
PNKP-224ENST00000631020 GLIS2Q9BZE0 524 aaPredicted RBP23.09■■□□□ 1.29
PNKP-224ENST00000631020 ABT1Q9ULW3 272 aaKnown RBP23.09■■□□□ 1.29
PNKP-224ENST00000631020 NOP58Q9Y2X3 529 aaKnown RBP23.09■■□□□ 1.29
PNKP-224ENST00000631020 WTIPA6NIX2 430 aaPredicted RBP23.08■■□□□ 1.29
PNKP-224ENST00000631020 SURF6O75683 361 aaKnown RBP23.08■■□□□ 1.29
PNKP-224ENST00000631020 CIAO1O76071 339 aa23.08■■□□□ 1.29
PNKP-224ENST00000631020 HELBQ8NG08 1087 aaPredicted RBP23.08■■□□□ 1.29
PNKP-224ENST00000631020 FBXO3Q9UK99 471 aa23.08■■□□□ 1.29
PNKP-224ENST00000631020 FMR1Q06787 632 aaKnown RBP eCLIP23.08■■□□□ 1.28
PNKP-224ENST00000631020 TBC1D10BQ4KMP7 808 aaPredicted RBP23.08■■□□□ 1.28
PNKP-224ENST00000631020 TLL2Q9Y6L7 1015 aa23.08■■□□□ 1.28
PNKP-224ENST00000631020 POLR2AP24928 1970 aaKnown RBP23.07■■□□□ 1.28
PNKP-224ENST00000631020 THSD7BQ9C0I4 1608 aa23.07■■□□□ 1.28
PNKP-224ENST00000631020 MMP14P50281 582 aa23.07■■□□□ 1.28
PNKP-224ENST00000631020 KIF4BQ2VIQ3 1234 aa23.07■■□□□ 1.28
PNKP-224ENST00000631020 C15orf52Q6ZUT6 534 aaKnown RBP23.07■■□□□ 1.28
PNKP-224ENST00000631020 EXOC6BQ9Y2D4 811 aa23.07■■□□□ 1.28
PNKP-224ENST00000631020 MYO3BQ8WXR4 1341 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms