RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	MYH3	P11055	1940 aa		18.08	■□□□□ 0.49
BBS1-225	ENST00000630659	SPDYE4	A6NLX3	237 aa		18.08	■□□□□ 0.49
BBS1-225	ENST00000630659	KDM4A	O75164	1064 aa		18.08	■□□□□ 0.49
BBS1-225	ENST00000630659	ANAPC15	P60006	121 aa		18.08	■□□□□ 0.49
BBS1-225	ENST00000630659	SEPT12	Q8IYM1	358 aa		18.08	■□□□□ 0.49
BBS1-225	ENST00000630659	TSC1	Q92574	1164 aa		18.08	■□□□□ 0.49
BBS1-225	ENST00000630659	UTP14A	Q9BVJ6	771 aa	Known RBP	18.08	■□□□□ 0.49
BBS1-225	ENST00000630659	ZNF652	Q9Y2D9	606 aa		18.08	■□□□□ 0.49
BBS1-225	ENST00000630659	ZNF609	O15014	1411 aa		18.08	■□□□□ 0.48
BBS1-225	ENST00000630659	ANKRD18B	A2A2Z9	1011 aa		18.08	■□□□□ 0.48
BBS1-225	ENST00000630659	ITGA6	P23229	1130 aa		18.08	■□□□□ 0.48
BBS1-225	ENST00000630659	RC3H1	Q5TC82	1133 aa	Known RBP	18.08	■□□□□ 0.48
BBS1-225	ENST00000630659	GREM2	Q9H772	168 aa		18.08	■□□□□ 0.48
BBS1-225	ENST00000630659	SH3TC1	Q8TE82	1336 aa		18.08	■□□□□ 0.48
BBS1-225	ENST00000630659	KCNQ4	P56696	695 aa		18.07	■□□□□ 0.48
BBS1-225	ENST00000630659	TIMM10	P62072	90 aa		18.07	■□□□□ 0.48
BBS1-225	ENST00000630659	HAUS7	Q99871	368 aa		18.07	■□□□□ 0.48
BBS1-225	ENST00000630659	FSD1	Q9BTV5	496 aa		18.07	■□□□□ 0.48
BBS1-225	ENST00000630659	LSG1	Q9H089	658 aa	Known RBP	18.07	■□□□□ 0.48
BBS1-225	ENST00000630659	TTC12	Q9H892	705 aa	Predicted RBP	18.07	■□□□□ 0.48
BBS1-225	ENST00000630659	QTRT2	Q9H974	415 aa	Known RBP	18.07	■□□□□ 0.48
BBS1-225	ENST00000630659	DDX41	Q9UJV9	622 aa	Known RBP	18.07	■□□□□ 0.48
BBS1-225	ENST00000630659	NIP7	Q9Y221	180 aa	Known RBP eCLIP	18.07	■□□□□ 0.48
BBS1-225	ENST00000630659	RAD50	Q92878	1312 aa		18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	CLEC4G	Q6UXB4	293 aa		18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	IL17RA	Q96F46	866 aa		18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	CALCOCO1	Q9P1Z2	691 aa		18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	AKAP2	Q9Y2D5	859 aa		18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	MORC2	Q9Y6X9	1032 aa	Predicted RBP	18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	WDR33	Q9C0J8	1336 aa	Known RBP	18.06	■□□□□ 0.48
BBS1-225	ENST00000630659		A0A1B0GUL7	405 aa		18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	SMTNL1	A8MU46	457 aa		18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	TIGD1	Q96MW7	591 aa		18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	CTNNA3	Q9UI47	895 aa		18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	BCOR	Q6W2J9	1755 aa		18.06	■□□□□ 0.48
BBS1-225	ENST00000630659	HSPA4	P34932	840 aa		18.05	■□□□□ 0.48
BBS1-225	ENST00000630659	CCNL1	Q9UK58	526 aa	Predicted RBP	18.05	■□□□□ 0.48
BBS1-225	ENST00000630659	PALD1	Q9ULE6	856 aa		18.05	■□□□□ 0.48
BBS1-225	ENST00000630659	PAXBP1	Q9Y5B6	917 aa		18.05	■□□□□ 0.48
BBS1-225	ENST00000630659	FAM177B	A6PVY3	158 aa		18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	RGL2	O15211	777 aa		18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	RPS6KA4	O75676	772 aa		18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	HSP90B1	P14625	803 aa	Known RBP	18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	NMI	Q13287	307 aa	Predicted RBP	18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	LDHAL6A	Q6ZMR3	332 aa		18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	RIPOR2	Q9Y4F9	1068 aa		18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	SBF2	Q86WG5	1849 aa		18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	NTSR2	O95665	410 aa		18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	EDC3	Q96F86	508 aa	Known RBP	18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	TMX3	Q96JJ7	454 aa		18.04	■□□□□ 0.48
BBS1-225	ENST00000630659	RFX7	Q2KHR2	1363 aa		18.03	■□□□□ 0.48
BBS1-225	ENST00000630659	SLFN14	P0C7P3	912 aa		18.03	■□□□□ 0.48
BBS1-225	ENST00000630659	HCLS1	P14317	486 aa	Predicted RBP	18.03	■□□□□ 0.48
BBS1-225	ENST00000630659	NCBP1	Q09161	790 aa	Known RBP	18.03	■□□□□ 0.48
BBS1-225	ENST00000630659	KRT222	Q8N1A0	295 aa		18.03	■□□□□ 0.48
BBS1-225	ENST00000630659	SNRK	Q9NRH2	765 aa		18.03	■□□□□ 0.48
BBS1-225	ENST00000630659	CNNM1	Q9NRU3	951 aa		18.03	■□□□□ 0.48
BBS1-225	ENST00000630659	METTL24	Q5JXM2	366 aa		18.02	■□□□□ 0.48
BBS1-225	ENST00000630659	FAM227B	Q96M60	508 aa		18.02	■□□□□ 0.48
BBS1-225	ENST00000630659	ZNF830	Q96NB3	372 aa	Predicted RBP	18.02	■□□□□ 0.48
BBS1-225	ENST00000630659	LY75	O60449	1722 aa		18.02	■□□□□ 0.47
BBS1-225	ENST00000630659	RIC1	Q4ADV7	1423 aa		18.02	■□□□□ 0.47
BBS1-225	ENST00000630659	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.02	■□□□□ 0.47
BBS1-225	ENST00000630659	NEK4	P51957	841 aa		18.01	■□□□□ 0.47
BBS1-225	ENST00000630659	TERF2	Q15554	542 aa		18.01	■□□□□ 0.47
BBS1-225	ENST00000630659		A0A0D9SFI3	127 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	IFIT1	P09914	478 aa	Known RBP	18	■□□□□ 0.47
BBS1-225	ENST00000630659	UBE2H	P62256	183 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	PTH1R	Q03431	593 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	CCDC158	Q5M9N0	1113 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	XAGE2	Q96GT9	111 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	NARF	Q9UHQ1	456 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	NDUFB9	Q9Y6M9	179 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	CCDC171	Q6TFL3	1326 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	DDX60	Q8IY21	1712 aa	Known RBP	18	■□□□□ 0.47
BBS1-225	ENST00000630659	GNPAT	O15228	680 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	IRX5	P78411	483 aa	Predicted RBP	18	■□□□□ 0.47
BBS1-225	ENST00000630659	CCDC152	Q4G0S7	254 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	GORAB	Q5T7V8	394 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	TICAM2	Q86XR7	235 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	KBTBD3	Q8NAB2	608 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	PAG1	Q9NWQ8	432 aa		18	■□□□□ 0.47
BBS1-225	ENST00000630659	LAMB2	P55268	1798 aa		17.99	■□□□□ 0.47
BBS1-225	ENST00000630659	ADORA1	P30542	326 aa		17.99	■□□□□ 0.47
BBS1-225	ENST00000630659	DDX46	Q7L014	1031 aa	Known RBP	17.99	■□□□□ 0.47
BBS1-225	ENST00000630659	RTCB	Q9Y3I0	505 aa	Known RBP	17.99	■□□□□ 0.47
BBS1-225	ENST00000630659	ATP6V1D	Q9Y5K8	247 aa		17.99	■□□□□ 0.47
BBS1-225	ENST00000630659	SNX14	Q9Y5W7	946 aa		17.99	■□□□□ 0.47
BBS1-225	ENST00000630659	SCN7A	Q01118	1682 aa		17.99	■□□□□ 0.47
BBS1-225	ENST00000630659	RTL9	Q8NET4	1388 aa		17.98	■□□□□ 0.47
BBS1-225	ENST00000630659	MED23	Q9ULK4	1368 aa		17.98	■□□□□ 0.47
BBS1-225	ENST00000630659	TTC39A	Q5SRH9	613 aa		17.98	■□□□□ 0.47
BBS1-225	ENST00000630659	USP48	Q86UV5	1035 aa		17.98	■□□□□ 0.47
BBS1-225	ENST00000630659	LRP5	O75197	1615 aa		17.98	■□□□□ 0.47
BBS1-225	ENST00000630659	TAF1L	Q8IZX4	1826 aa		17.98	■□□□□ 0.47
BBS1-225	ENST00000630659	GOLIM4	O00461	696 aa		17.98	■□□□□ 0.47
BBS1-225	ENST00000630659	USPL1	Q5W0Q7	1092 aa		17.98	■□□□□ 0.47
BBS1-225	ENST00000630659	SMIM5	Q71RC9	77 aa		17.98	■□□□□ 0.47
BBS1-225	ENST00000630659	VGLL2	Q8N8G2	317 aa		17.98	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms