RNA–Protein interactions for RNA: ENST00000629552.2

SOX2-OT-252, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 572 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-252ENST00000629552 RPS12P25398 132 aaKnown RBP17.4■□□□□ 0.38
SOX2-OT-252ENST00000629552 KIF4BQ2VIQ3 1234 aa17.4■□□□□ 0.38
SOX2-OT-252ENST00000629552 USP48Q86UV5 1035 aa17.4■□□□□ 0.38
SOX2-OT-252ENST00000629552 USP44Q9H0E7 712 aa17.4■□□□□ 0.38
SOX2-OT-252ENST00000629552 ZNF408Q9H9D4 720 aa17.4■□□□□ 0.38
SOX2-OT-252ENST00000629552 ABT1Q9ULW3 272 aaKnown RBP17.4■□□□□ 0.38
SOX2-OT-252ENST00000629552 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
SOX2-OT-252ENST00000629552 USP17L3A6NCW0 530 aa17.39■□□□□ 0.37
SOX2-OT-252ENST00000629552 USP17L4A6NCW7 530 aa17.39■□□□□ 0.37
SOX2-OT-252ENST00000629552 HSPA1AP0DMV8 641 aaKnown RBP17.39■□□□□ 0.37
SOX2-OT-252ENST00000629552 HSPA1BP0DMV9 641 aaKnown RBP17.39■□□□□ 0.37
SOX2-OT-252ENST00000629552 ALDH1L2Q3SY69 923 aa17.39■□□□□ 0.37
SOX2-OT-252ENST00000629552 DACT2Q5SW24 774 aa17.39■□□□□ 0.37
SOX2-OT-252ENST00000629552 USP17L1Q7RTZ2 530 aa17.39■□□□□ 0.37
SOX2-OT-252ENST00000629552 KLHDC4Q8TBB5 520 aa17.39■□□□□ 0.37
SOX2-OT-252ENST00000629552 NOB1Q9ULX3 412 aaKnown RBP17.39■□□□□ 0.37
SOX2-OT-252ENST00000629552 LEMD3Q9Y2U8 911 aa17.39■□□□□ 0.37
SOX2-OT-252ENST00000629552 CELF2O95319 508 aaKnown RBP17.38■□□□□ 0.37
SOX2-OT-252ENST00000629552 KCNJ4P48050 445 aa17.38■□□□□ 0.37
SOX2-OT-252ENST00000629552 CCDC57Q2TAC2 916 aa17.38■□□□□ 0.37
SOX2-OT-252ENST00000629552 LDHAL6AQ6ZMR3 332 aa17.38■□□□□ 0.37
SOX2-OT-252ENST00000629552 PODNQ7Z5L7 613 aa17.38■□□□□ 0.37
SOX2-OT-252ENST00000629552 ANKRD2Q9GZV1 360 aa17.38■□□□□ 0.37
SOX2-OT-252ENST00000629552 GGA3Q9NZ52 723 aa17.38■□□□□ 0.37
SOX2-OT-252ENST00000629552 JAG2Q9Y219 1238 aa17.38■□□□□ 0.37
SOX2-OT-252ENST00000629552 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
SOX2-OT-252ENST00000629552 RARSP54136 660 aaKnown RBP17.37■□□□□ 0.37
SOX2-OT-252ENST00000629552 ZNF280AP59817 542 aaPredicted RBP17.37■□□□□ 0.37
SOX2-OT-252ENST00000629552 GRM1Q13255 1194 aa17.37■□□□□ 0.37
SOX2-OT-252ENST00000629552 RABL6Q3YEC7 729 aaPredicted RBP17.37■□□□□ 0.37
SOX2-OT-252ENST00000629552 TAF7LQ5H9L4 462 aa17.37■□□□□ 0.37
SOX2-OT-252ENST00000629552 COA1Q9GZY4 146 aa17.37■□□□□ 0.37
SOX2-OT-252ENST00000629552 DEFB115Q30KQ5 88 aa17.36■□□□□ 0.37
SOX2-OT-252ENST00000629552 LRRC24Q50LG9 513 aa17.36■□□□□ 0.37
SOX2-OT-252ENST00000629552 CYP4F22Q6NT55 531 aa17.36■□□□□ 0.37
SOX2-OT-252ENST00000629552 ZC3H15Q8WU90 426 aaKnown RBP17.36■□□□□ 0.37
SOX2-OT-252ENST00000629552 CNNM1Q9NRU3 951 aa17.36■□□□□ 0.37
SOX2-OT-252ENST00000629552 CACNA1FO60840 1977 aa17.36■□□□□ 0.37
SOX2-OT-252ENST00000629552 ZNF609O15014 1411 aa17.36■□□□□ 0.37
SOX2-OT-252ENST00000629552 USP17L8P0C7I0 530 aa17.35■□□□□ 0.37
SOX2-OT-252ENST00000629552 GTF2IP78347 998 aa17.35■□□□□ 0.37
SOX2-OT-252ENST00000629552 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
SOX2-OT-252ENST00000629552 COL13A1Q5TAT6 717 aaPredicted RBP17.35■□□□□ 0.37
SOX2-OT-252ENST00000629552 CDC37L1Q7L3B6 337 aa17.35■□□□□ 0.37
SOX2-OT-252ENST00000629552 KRT26Q7Z3Y9 468 aa17.35■□□□□ 0.37
SOX2-OT-252ENST00000629552 CERS5Q8N5B7 392 aa17.35■□□□□ 0.37
SOX2-OT-252ENST00000629552 AGBL3Q8NEM8 1001 aa17.35■□□□□ 0.37
SOX2-OT-252ENST00000629552 CD209Q9NNX6 404 aa17.35■□□□□ 0.37
SOX2-OT-252ENST00000629552 ZNF646O15015 1829 aaPredicted RBP17.34■□□□□ 0.37
SOX2-OT-252ENST00000629552 SCARF1Q14162 830 aa17.34■□□□□ 0.37
SOX2-OT-252ENST00000629552 NBPF9Q3BBW0 867 aa17.34■□□□□ 0.37
SOX2-OT-252ENST00000629552 ANGEL2Q5VTE6 544 aaKnown RBP17.34■□□□□ 0.37
SOX2-OT-252ENST00000629552 PAXIP1Q6ZW49 1069 aaPredicted RBP17.34■□□□□ 0.37
SOX2-OT-252ENST00000629552 MYOZ2Q9NPC6 264 aa17.34■□□□□ 0.37
SOX2-OT-252ENST00000629552 PCDHAC2Q9Y5I4 1007 aa17.34■□□□□ 0.37
SOX2-OT-252ENST00000629552 TLL2Q9Y6L7 1015 aa17.34■□□□□ 0.37
SOX2-OT-252ENST00000629552 WDR33Q9C0J8 1336 aaKnown RBP17.33■□□□□ 0.36
SOX2-OT-252ENST00000629552 BCAR3O75815 825 aa17.33■□□□□ 0.36
SOX2-OT-252ENST00000629552 SASH1O94885 1247 aa17.33■□□□□ 0.36
SOX2-OT-252ENST00000629552 STRIP1Q5VSL9 837 aa17.33■□□□□ 0.36
SOX2-OT-252ENST00000629552 SAPCD2Q86UD0 394 aa17.33■□□□□ 0.36
SOX2-OT-252ENST00000629552 KIAA0825Q8IV33 1275 aa17.33■□□□□ 0.36
SOX2-OT-252ENST00000629552 RIPOR2Q9Y4F9 1068 aa17.33■□□□□ 0.36
SOX2-OT-252ENST00000629552 A0A1B0GUL6 1792 aa17.33■□□□□ 0.36
SOX2-OT-252ENST00000629552 AOX1Q06278 1338 aa17.32■□□□□ 0.36
SOX2-OT-252ENST00000629552 FOXN1O15353 648 aa17.32■□□□□ 0.36
SOX2-OT-252ENST00000629552 AOC2O75106 756 aa17.32■□□□□ 0.36
SOX2-OT-252ENST00000629552 CT47B1P0C2W7 299 aaPredicted RBP17.32■□□□□ 0.36
SOX2-OT-252ENST00000629552 GYG1P46976 350 aa17.32■□□□□ 0.36
SOX2-OT-252ENST00000629552 PRAMEF18Q5VWM3 479 aa17.32■□□□□ 0.36
SOX2-OT-252ENST00000629552 TTLL5Q6EMB2 1281 aa17.32■□□□□ 0.36
SOX2-OT-252ENST00000629552 C15orf52Q6ZUT6 534 aaKnown RBP17.32■□□□□ 0.36
SOX2-OT-252ENST00000629552 CAPNS2Q96L46 248 aa17.32■□□□□ 0.36
SOX2-OT-252ENST00000629552 RFX5P48382 616 aaPredicted RBP17.31■□□□□ 0.36
SOX2-OT-252ENST00000629552 DCPSQ96C86 337 aaKnown RBP17.31■□□□□ 0.36
SOX2-OT-252ENST00000629552 MEIS3Q99687 375 aa17.31■□□□□ 0.36
SOX2-OT-252ENST00000629552 F8W031 263 aaPredicted RBP17.3■□□□□ 0.36
SOX2-OT-252ENST00000629552 BRPF1P55201 1214 aaPredicted RBP17.3■□□□□ 0.36
SOX2-OT-252ENST00000629552 ZIC5Q96T25 663 aa17.3■□□□□ 0.36
SOX2-OT-252ENST00000629552 IQSEC3Q9UPP2 1182 aaPredicted RBP17.3■□□□□ 0.36
SOX2-OT-252ENST00000629552 PSME4Q14997 1843 aa17.29■□□□□ 0.36
SOX2-OT-252ENST00000629552 IL1R1P14778 569 aa17.29■□□□□ 0.36
SOX2-OT-252ENST00000629552 ZNF804AQ7Z570 1209 aa17.29■□□□□ 0.36
SOX2-OT-252ENST00000629552 VGLL2Q8N8G2 317 aa17.29■□□□□ 0.36
SOX2-OT-252ENST00000629552 CDCA5Q96FF9 252 aa17.29■□□□□ 0.36
SOX2-OT-252ENST00000629552 FAM84BQ96KN1 310 aaPredicted RBP17.29■□□□□ 0.36
SOX2-OT-252ENST00000629552 API5Q9BZZ5 524 aaKnown RBP17.29■□□□□ 0.36
SOX2-OT-252ENST00000629552 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
SOX2-OT-252ENST00000629552 WNT10BO00744 389 aa17.28■□□□□ 0.36
SOX2-OT-252ENST00000629552 TRIM27P14373 513 aa17.28■□□□□ 0.36
SOX2-OT-252ENST00000629552 GRIK5Q16478 980 aa17.28■□□□□ 0.36
SOX2-OT-252ENST00000629552 METTL24Q5JXM2 366 aa17.28■□□□□ 0.36
SOX2-OT-252ENST00000629552 MOB2Q70IA6 237 aa17.28■□□□□ 0.36
SOX2-OT-252ENST00000629552 SULF1Q8IWU6 871 aa17.28■□□□□ 0.36
SOX2-OT-252ENST00000629552 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
SOX2-OT-252ENST00000629552 CLUAP1Q96AJ1 413 aa17.28■□□□□ 0.36
SOX2-OT-252ENST00000629552 UBTFL1P0CB47 393 aaPredicted RBP17.27■□□□□ 0.36
SOX2-OT-252ENST00000629552 PTPN12Q05209 780 aaKnown RBP17.27■□□□□ 0.36
SOX2-OT-252ENST00000629552 ZBED3Q96IU2 234 aaPredicted RBP17.27■□□□□ 0.36
SOX2-OT-252ENST00000629552 SIL1Q9H173 461 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms