RNA–Protein interactions for RNA: ENST00000628477.2

DDX46-212, Transcript of DEAD-box helicase 46, humanhuman

TSL 5 BASIC

Gene DDX46, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX46-212ENST00000628477 PARP3Q9Y6F1 533 aa16.73■□□□□ 0.27
DDX46-212ENST00000628477 QSER1Q2KHR3 1735 aa16.73■□□□□ 0.27
DDX46-212ENST00000628477 AKAP11Q9UKA4 1901 aa16.73■□□□□ 0.27
DDX46-212ENST00000628477 CHGBP05060 677 aa16.72■□□□□ 0.27
DDX46-212ENST00000628477 HOXA10P31260 410 aaPredicted RBP16.72■□□□□ 0.27
DDX46-212ENST00000628477 BCAMP50895 628 aa16.72■□□□□ 0.27
DDX46-212ENST00000628477 RBM17Q96I25 401 aaKnown RBP16.72■□□□□ 0.27
DDX46-212ENST00000628477 ANKRD2Q9GZV1 360 aa16.72■□□□□ 0.27
DDX46-212ENST00000628477 RAD50Q92878 1312 aa16.72■□□□□ 0.27
DDX46-212ENST00000628477 KIAA1211Q6ZU35 1233 aa16.72■□□□□ 0.27
DDX46-212ENST00000628477 CCDC125Q86Z20 511 aa16.72■□□□□ 0.27
DDX46-212ENST00000628477 ANKRD31Q8N7Z5 1873 aa16.71■□□□□ 0.27
DDX46-212ENST00000628477 CRAMP1Q96RY5 1269 aa16.71■□□□□ 0.27
DDX46-212ENST00000628477 HMG20BQ9P0W2 317 aa16.71■□□□□ 0.27
DDX46-212ENST00000628477 MED23Q9ULK4 1368 aa16.7■□□□□ 0.26
DDX46-212ENST00000628477 CYP2E1P05181 493 aaPredicted RBP16.7■□□□□ 0.26
DDX46-212ENST00000628477 SLC4A3P48751 1232 aa16.7■□□□□ 0.26
DDX46-212ENST00000628477 PTH1RQ03431 593 aa16.7■□□□□ 0.26
DDX46-212ENST00000628477 RASGRF1Q13972 1273 aa16.7■□□□□ 0.26
DDX46-212ENST00000628477 SLFNL1Q499Z3 407 aa16.7■□□□□ 0.26
DDX46-212ENST00000628477 SLC51AQ86UW1 340 aa16.7■□□□□ 0.26
DDX46-212ENST00000628477 ZNF804BA4D1E1 1349 aa16.69■□□□□ 0.26
DDX46-212ENST00000628477 RNF113AO15541 343 aaKnown RBP16.69■□□□□ 0.26
DDX46-212ENST00000628477 BBOX1O75936 387 aa16.69■□□□□ 0.26
DDX46-212ENST00000628477 HSPA4P34932 840 aa16.69■□□□□ 0.26
DDX46-212ENST00000628477 GYG1P46976 350 aa16.69■□□□□ 0.26
DDX46-212ENST00000628477 MCMDC2Q4G0Z9 681 aa16.69■□□□□ 0.26
DDX46-212ENST00000628477 ZNF589Q86UQ0 364 aaPredicted RBP16.69■□□□□ 0.26
DDX46-212ENST00000628477 SPATA5Q8NB90 893 aa16.69■□□□□ 0.26
DDX46-212ENST00000628477 PDGFDQ9GZP0 370 aaPredicted RBP16.69■□□□□ 0.26
DDX46-212ENST00000628477 MCCP23508 829 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 KCNJ4P48050 445 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
DDX46-212ENST00000628477 ZMYM1Q5SVZ6 1142 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 IL17RAQ96F46 866 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 FAM84BQ96KN1 310 aaPredicted RBP16.68■□□□□ 0.26
DDX46-212ENST00000628477 SEC62Q99442 399 aaKnown RBP16.68■□□□□ 0.26
DDX46-212ENST00000628477 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
DDX46-212ENST00000628477 PALD1Q9ULE6 856 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 CCDC171Q6TFL3 1326 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 SRGNP10124 158 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 KLRK1P26718 216 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 PDE6BP35913 854 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 BECN1Q14457 450 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 FBXO33Q7Z6M2 555 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 HELLSQ9NRZ9 838 aa16.68■□□□□ 0.26
DDX46-212ENST00000628477 ZFYP08048 801 aaPredicted RBP16.67■□□□□ 0.26
DDX46-212ENST00000628477 ANAPC15P60006 121 aa16.67■□□□□ 0.26
DDX46-212ENST00000628477 RABEP1Q15276 862 aa16.67■□□□□ 0.26
DDX46-212ENST00000628477 LRRFIP1Q32MZ4 808 aaKnown RBP16.67■□□□□ 0.26
DDX46-212ENST00000628477 CAVIN4Q5BKX8 364 aa16.67■□□□□ 0.26
DDX46-212ENST00000628477 CCDC129Q6ZRS4 1044 aa16.67■□□□□ 0.26
DDX46-212ENST00000628477 MAP4K1Q92918 833 aa16.67■□□□□ 0.26
DDX46-212ENST00000628477 SNX21Q969T3 373 aa16.67■□□□□ 0.26
DDX46-212ENST00000628477 ANKIB1Q9P2G1 1089 aa16.67■□□□□ 0.26
DDX46-212ENST00000628477 IRS2Q9Y4H2 1338 aa16.66■□□□□ 0.26
DDX46-212ENST00000628477 NPR1P16066 1061 aa16.66■□□□□ 0.26
DDX46-212ENST00000628477 GPSM2P81274 684 aa16.66■□□□□ 0.26
DDX46-212ENST00000628477 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
DDX46-212ENST00000628477 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
DDX46-212ENST00000628477 LEMD3Q9Y2U8 911 aa16.66■□□□□ 0.26
DDX46-212ENST00000628477 XDHP47989 1333 aa16.65■□□□□ 0.26
DDX46-212ENST00000628477 OSBP2Q969R2 916 aa16.65■□□□□ 0.26
DDX46-212ENST00000628477 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.65■□□□□ 0.261e-7■■□□□ 12.6
DDX46-212ENST00000628477 NECTIN1Q15223 517 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 TMC4Q7Z404 712 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 TXNRD3Q86VQ6 643 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 VPS37DQ86XT2 251 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 KCNB2Q92953 911 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 IQSEC3Q9UPP2 1182 aaPredicted RBP16.64■□□□□ 0.25
DDX46-212ENST00000628477 MAST3O60307 1309 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 M0R2C6 588 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 IDH1O75874 414 aaKnown RBP16.64■□□□□ 0.25
DDX46-212ENST00000628477 CD2BP2O95400 341 aaKnown RBP16.64■□□□□ 0.25
DDX46-212ENST00000628477 HIBADHP31937 336 aaKnown RBP16.64■□□□□ 0.25
DDX46-212ENST00000628477 ADD2P35612 726 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 ZSCAN25Q6NSZ9 544 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 SP8Q8IXZ3 490 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 RASEFQ8IZ41 740 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 MASTLQ96GX5 879 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 RBM8AQ9Y5S9 174 aaKnown RBP16.64■□□□□ 0.25
DDX46-212ENST00000628477 SNX14Q9Y5W7 946 aa16.64■□□□□ 0.25
DDX46-212ENST00000628477 MYO5AQ9Y4I1 1855 aaKnown RBP16.64■□□□□ 0.25
DDX46-212ENST00000628477 PPEF1O14829 653 aaPredicted RBP16.63■□□□□ 0.25
DDX46-212ENST00000628477 WASHC4Q2M389 1173 aa16.63■□□□□ 0.25
DDX46-212ENST00000628477 SLC9C2Q5TAH2 1124 aa16.63■□□□□ 0.25
DDX46-212ENST00000628477 PRPF40BQ6NWY9 871 aaKnown RBP16.63■□□□□ 0.25
DDX46-212ENST00000628477 C15orf52Q6ZUT6 534 aaKnown RBP16.63■□□□□ 0.25
DDX46-212ENST00000628477 APPBP2Q92624 585 aa16.63■□□□□ 0.25
DDX46-212ENST00000628477 NSFL1CQ9UNZ2 370 aaKnown RBP16.63■□□□□ 0.25
DDX46-212ENST00000628477 MYH7P12883 1935 aa16.63■□□□□ 0.25
DDX46-212ENST00000628477 COL11A2P13942 1736 aaPredicted RBP16.62■□□□□ 0.25
DDX46-212ENST00000628477 SEMA3EO15041 775 aa16.62■□□□□ 0.25
DDX46-212ENST00000628477 PDE6AP16499 860 aa16.62■□□□□ 0.25
DDX46-212ENST00000628477 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
DDX46-212ENST00000628477 ALDH1B1P30837 517 aa16.62■□□□□ 0.25
DDX46-212ENST00000628477 UBE3CQ15386 1083 aa16.62■□□□□ 0.25
DDX46-212ENST00000628477 C2CD5Q86YS7 1000 aa16.62■□□□□ 0.25
DDX46-212ENST00000628477 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms