RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 NBPF9Q3BBW0 867 aa17.31■□□□□ 0.36
TCF4-262ENST00000628078 CCDC102AQ96A19 550 aa17.31■□□□□ 0.36
TCF4-262ENST00000628078 BSDC1Q9NW68 430 aaPredicted RBP17.31■□□□□ 0.36
TCF4-262ENST00000628078 MYH3P11055 1940 aa17.31■□□□□ 0.36
TCF4-262ENST00000628078 H7C1W4 665 aa17.3■□□□□ 0.36
TCF4-262ENST00000628078 KLRK1P26718 216 aa17.3■□□□□ 0.36
TCF4-262ENST00000628078 PODNQ7Z5L7 613 aa17.3■□□□□ 0.36
TCF4-262ENST00000628078 CHMP4AQ9BY43 222 aa17.3■□□□□ 0.36
TCF4-262ENST00000628078 RNF186Q9NXI6 227 aa17.3■□□□□ 0.36
TCF4-262ENST00000628078 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
TCF4-262ENST00000628078 PSME4Q14997 1843 aa17.3■□□□□ 0.36
TCF4-262ENST00000628078 UBE2Q2LH0YL09 131 aa17.29■□□□□ 0.36
TCF4-262ENST00000628078 FKBP5Q13451 457 aaPredicted RBP17.29■□□□□ 0.36
TCF4-262ENST00000628078 CSRNP1Q96S65 589 aa17.29■□□□□ 0.36
TCF4-262ENST00000628078 SNAP23O00161 211 aa17.28■□□□□ 0.36
TCF4-262ENST00000628078 SLC10A3P09131 477 aa17.28■□□□□ 0.36
TCF4-262ENST00000628078 ITGA6P23229 1130 aa17.28■□□□□ 0.36
TCF4-262ENST00000628078 IGHMBP2P38935 993 aaKnown RBP17.28■□□□□ 0.36
TCF4-262ENST00000628078 FLIIQ13045 1269 aa17.28■□□□□ 0.36
TCF4-262ENST00000628078 PRKG1Q13976 671 aa17.28■□□□□ 0.36
TCF4-262ENST00000628078 GCKRQ14397 625 aa17.28■□□□□ 0.36
TCF4-262ENST00000628078 DACT2Q5SW24 774 aa17.28■□□□□ 0.36
TCF4-262ENST00000628078 AKAP11Q9UKA4 1901 aa17.27■□□□□ 0.36
TCF4-262ENST00000628078 SASH1O94885 1247 aa17.27■□□□□ 0.36
TCF4-262ENST00000628078 MLLT1Q03111 559 aaPredicted RBP17.27■□□□□ 0.36
TCF4-262ENST00000628078 MKRN3Q13064 507 aaKnown RBP17.27■□□□□ 0.36
TCF4-262ENST00000628078 TTLL12Q14166 644 aaPredicted RBP17.27■□□□□ 0.36
TCF4-262ENST00000628078 HELBQ8NG08 1087 aaPredicted RBP17.27■□□□□ 0.36
TCF4-262ENST00000628078 MRS2Q9HD23 443 aa17.27■□□□□ 0.36
TCF4-262ENST00000628078 F6X3S4 739 aa17.26■□□□□ 0.35
TCF4-262ENST00000628078 GTF2IP78347 998 aa17.26■□□□□ 0.35
TCF4-262ENST00000628078 CCDC27Q2M243 656 aa17.26■□□□□ 0.35
TCF4-262ENST00000628078 RASAL3Q86YV0 1011 aa17.26■□□□□ 0.35
TCF4-262ENST00000628078 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
TCF4-262ENST00000628078 DNAAF4Q8WXU2 420 aa17.26■□□□□ 0.35
TCF4-262ENST00000628078 MPHOSPH8Q99549 860 aa17.26■□□□□ 0.35
TCF4-262ENST00000628078 MED23Q9ULK4 1368 aa17.26■□□□□ 0.35
TCF4-262ENST00000628078 ZNF804BA4D1E1 1349 aa17.25■□□□□ 0.35
TCF4-262ENST00000628078 WNT10BO00744 389 aa17.25■□□□□ 0.35
TCF4-262ENST00000628078 TAF5LO75529 589 aa17.25■□□□□ 0.35
TCF4-262ENST00000628078 KCNJ4P48050 445 aa17.25■□□□□ 0.35
TCF4-262ENST00000628078 CASP7P55210 303 aa17.25■□□□□ 0.35
TCF4-262ENST00000628078 EXOSC9Q06265 439 aaKnown RBP17.25■□□□□ 0.35
TCF4-262ENST00000628078 TTLL5Q6EMB2 1281 aa17.25■□□□□ 0.35
TCF4-262ENST00000628078 OGFOD1Q8N543 542 aa17.25■□□□□ 0.35
TCF4-262ENST00000628078 COA1Q9GZY4 146 aa17.25■□□□□ 0.35
TCF4-262ENST00000628078 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
TCF4-262ENST00000628078 FANCIQ9NVI1 1328 aa17.24■□□□□ 0.35
TCF4-262ENST00000628078 VAMP4O75379 141 aa17.24■□□□□ 0.35
TCF4-262ENST00000628078 CHRNDQ07001 517 aa17.24■□□□□ 0.35
TCF4-262ENST00000628078 FZD1Q9UP38 647 aa17.24■□□□□ 0.35
TCF4-262ENST00000628078 LEMD3Q9Y2U8 911 aa17.24■□□□□ 0.35
TCF4-262ENST00000628078 PLIN1O60240 522 aa17.23■□□□□ 0.35
TCF4-262ENST00000628078 TBC1D8O95759 1140 aa17.23■□□□□ 0.35
TCF4-262ENST00000628078 CSF1RP07333 972 aa17.23■□□□□ 0.35
TCF4-262ENST00000628078 STRIP1Q5VSL9 837 aa17.23■□□□□ 0.35
TCF4-262ENST00000628078 MYH16Q9H6N6 1097 aa17.23■□□□□ 0.35
TCF4-262ENST00000628078 JAG2Q9Y219 1238 aa17.23■□□□□ 0.35
TCF4-262ENST00000628078 ZNF646O15015 1829 aaPredicted RBP17.23■□□□□ 0.35
TCF4-262ENST00000628078 F8W031 263 aaPredicted RBP17.22■□□□□ 0.35
TCF4-262ENST00000628078 LINS1Q8NG48 757 aa17.22■□□□□ 0.35
TCF4-262ENST00000628078 ANKRD2Q9GZV1 360 aa17.22■□□□□ 0.35
TCF4-262ENST00000628078 SPINK5Q9NQ38 1064 aaPredicted RBP17.22■□□□□ 0.35
TCF4-262ENST00000628078 SAGE1Q9NXZ1 904 aa17.22■□□□□ 0.35
TCF4-262ENST00000628078 PCDHAC2Q9Y5I4 1007 aa17.22■□□□□ 0.35
TCF4-262ENST00000628078 IL16Q14005 1332 aa17.21■□□□□ 0.35
TCF4-262ENST00000628078 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.35
TCF4-262ENST00000628078 ANKRD18BA2A2Z9 1011 aa17.21■□□□□ 0.35
TCF4-262ENST00000628078 RGS19P49795 217 aa17.21■□□□□ 0.35
TCF4-262ENST00000628078 SOX10P56693 466 aa17.21■□□□□ 0.35
TCF4-262ENST00000628078 FOXO4P98177 505 aa17.21■□□□□ 0.35
TCF4-262ENST00000628078 ZNF594Q96JF6 807 aaPredicted RBP17.21■□□□□ 0.35
TCF4-262ENST00000628078 PLA2G12BQ9BX93 195 aa17.21■□□□□ 0.35
TCF4-262ENST00000628078 ZNF609O15014 1411 aa17.21■□□□□ 0.34
TCF4-262ENST00000628078 PAPPA2Q9BXP8 1791 aa17.2■□□□□ 0.34
TCF4-262ENST00000628078 EPHA10Q5JZY3 1008 aa17.2■□□□□ 0.34
TCF4-262ENST00000628078 CD209Q9NNX6 404 aa17.2■□□□□ 0.34
TCF4-262ENST00000628078 FKBP1BP68106 108 aa17.19■□□□□ 0.34
TCF4-262ENST00000628078 PTPN12Q05209 780 aaKnown RBP17.19■□□□□ 0.34
TCF4-262ENST00000628078 HDAC9Q9UKV0 1011 aa17.19■□□□□ 0.34
TCF4-262ENST00000628078 MYO3BQ8WXR4 1341 aa17.19■□□□□ 0.34
TCF4-262ENST00000628078 NF2P35240 595 aa17.18■□□□□ 0.34
TCF4-262ENST00000628078 IFIT5Q13325 482 aaKnown RBP17.18■□□□□ 0.34
TCF4-262ENST00000628078 BEND3Q5T5X7 828 aa17.18■□□□□ 0.34
TCF4-262ENST00000628078 LMBR1LQ6UX01 489 aa17.18■□□□□ 0.34
TCF4-262ENST00000628078 FAM9BQ8IZU0 186 aa17.18■□□□□ 0.34
TCF4-262ENST00000628078 CERS5Q8N5B7 392 aa17.18■□□□□ 0.34
TCF4-262ENST00000628078 ANP32CO43423 234 aa17.17■□□□□ 0.34
TCF4-262ENST00000628078 SLC4A10Q6U841 1118 aa17.17■□□□□ 0.34
TCF4-262ENST00000628078 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
TCF4-262ENST00000628078 ANGEL1Q9UNK9 670 aaKnown RBP17.17■□□□□ 0.34
TCF4-262ENST00000628078 CLRN2A0PK11 232 aa17.16■□□□□ 0.34
TCF4-262ENST00000628078 DLGAP5Q15398 846 aa17.16■□□□□ 0.34
TCF4-262ENST00000628078 TAF7LQ5H9L4 462 aa17.16■□□□□ 0.34
TCF4-262ENST00000628078 CTU1Q7Z7A3 348 aaKnown RBP17.16■□□□□ 0.34
TCF4-262ENST00000628078 CACNA1FO60840 1977 aa17.15■□□□□ 0.34
TCF4-262ENST00000628078 LDHAL6AQ6ZMR3 332 aa17.15■□□□□ 0.34
TCF4-262ENST00000628078 ARMC9Q7Z3E5 817 aa17.15■□□□□ 0.34
TCF4-262ENST00000628078 APOBEC3FQ8IUX4 373 aaKnown RBP17.15■□□□□ 0.34
TCF4-262ENST00000628078 ZNF296Q8WUU4 475 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms