RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 GSTTP1A0A1W2PQM5 241 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 ARHGEF37A1IGU5 675 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 USP16Q9Y5T5 823 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 MAP3K5Q99683 1374 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 PLBD2Q8NHP8 589 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 UPF3BQ9BZI7 483 aaKnown RBP12.66□□□□□ -0.38
VPS8-227ENST00000625842 PIM2Q9P1W9 311 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 RNMTO43148 476 aaKnown RBP12.66□□□□□ -0.38
VPS8-227ENST00000625842 FAM13AO94988 1023 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 GAS8O95995 478 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 HOXB7P09629 217 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 PARP1P09874 1014 aaKnown RBP12.66□□□□□ -0.38
VPS8-227ENST00000625842 KCTD2Q14681 263 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 HEATR3Q7Z4Q2 680 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 ABI1Q8IZP0 508 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 CD2APQ9Y5K6 639 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
VPS8-227ENST00000625842 ZBTB43O43298 467 aa12.65□□□□□ -0.38
VPS8-227ENST00000625842 DPP9Q86TI2 863 aa12.65□□□□□ -0.38
VPS8-227ENST00000625842 EXOC7Q9UPT5 735 aa12.65□□□□□ -0.38
VPS8-227ENST00000625842 RTN1Q16799 776 aa12.65□□□□□ -0.38
VPS8-227ENST00000625842 PRPF40BQ6NWY9 871 aaKnown RBP12.65□□□□□ -0.38
VPS8-227ENST00000625842 ZBTB33Q86T24 672 aa12.65□□□□□ -0.38
VPS8-227ENST00000625842 SEPT12Q8IYM1 358 aa12.65□□□□□ -0.38
VPS8-227ENST00000625842 DDX21Q9NR30 783 aaKnown RBP eCLIP12.65□□□□□ -0.38
VPS8-227ENST00000625842 CNPY2Q9Y2B0 182 aa12.65□□□□□ -0.38
VPS8-227ENST00000625842 PRPHP41219 470 aa12.65□□□□□ -0.38
VPS8-227ENST00000625842 PUM3Q15397 648 aaKnown RBP12.65□□□□□ -0.38
VPS8-227ENST00000625842 IQSEC3Q9UPP2 1182 aaPredicted RBP12.65□□□□□ -0.38
VPS8-227ENST00000625842 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
VPS8-227ENST00000625842 USP14P54578 494 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 GADL1Q6ZQY3 521 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 NPHP4O75161 1426 aaPredicted RBP12.64□□□□□ -0.39
VPS8-227ENST00000625842 MTIF2P46199 727 aaKnown RBP12.64□□□□□ -0.39
VPS8-227ENST00000625842 NOX5Q96PH1 765 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 ORAI2Q96SN7 254 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 RBM28Q9NW13 759 aaKnown RBP12.64□□□□□ -0.39
VPS8-227ENST00000625842 CHPF2Q9P2E5 772 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 HOXC9P31274 260 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 MSL1Q68DK7 614 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 FILIP1Q7Z7B0 1213 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 SLC10A4Q96EP9 437 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 THUMPD2Q9BTF0 503 aaKnown RBP12.64□□□□□ -0.39
VPS8-227ENST00000625842 EXOC1Q9NV70 894 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 ATP10BO94823 1461 aa12.64□□□□□ -0.39
VPS8-227ENST00000625842 RPS8P62241 208 aaKnown RBP12.63□□□□□ -0.39
VPS8-227ENST00000625842 STRN3Q13033 797 aa12.63□□□□□ -0.39
VPS8-227ENST00000625842 CTNNBL1Q8WYA6 563 aaPredicted RBP12.63□□□□□ -0.39
VPS8-227ENST00000625842 MACROD2A1Z1Q3 448 aa12.63□□□□□ -0.39
VPS8-227ENST00000625842 CTAGE5O15320 804 aa12.63□□□□□ -0.39
VPS8-227ENST00000625842 ERLIN1O75477 346 aa12.63□□□□□ -0.39
VPS8-227ENST00000625842 SLC4A8Q2Y0W8 1093 aa12.63□□□□□ -0.39
VPS8-227ENST00000625842 LRFN2Q9ULH4 789 aa12.63□□□□□ -0.39
VPS8-227ENST00000625842 RBM25P49756 843 aaKnown RBP12.63□□□□□ -0.39
VPS8-227ENST00000625842 MBIPQ9NS73 344 aa12.63□□□□□ -0.39
VPS8-227ENST00000625842 TMOD1P28289 359 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 TTLL6Q8N841 843 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 PRPF31Q8WWY3 499 aaKnown RBP12.62□□□□□ -0.39
VPS8-227ENST00000625842 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
VPS8-227ENST00000625842 TMEM2Q9UHN6 1383 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 NSMCE1Q8WV22 266 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 KAT6BQ8WYB5 2073 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 ARID5AQ03989 594 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 CAVIN1Q6NZI2 390 aaKnown RBP12.62□□□□□ -0.39
VPS8-227ENST00000625842 RETREG2Q8NC44 543 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 PAGR1Q9BTK6 254 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 CCDC171Q6TFL3 1326 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 NSMFQ6X4W1 530 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 LZTS2Q9BRK4 669 aa12.62□□□□□ -0.39
VPS8-227ENST00000625842 BBOX1O75936 387 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 TDRD12Q587J7 1177 aaKnown RBP12.61□□□□□ -0.39
VPS8-227ENST00000625842 EXOC8Q8IYI6 725 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 ARHGAP45Q92619 1136 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 GPBP1L1Q9HC44 474 aaPredicted RBP12.61□□□□□ -0.39
VPS8-227ENST00000625842 BICRAQ9NZM4 1560 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 F6X3S4 739 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 MCF2L2Q86YR7 1114 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 EXOC4Q96A65 974 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 SLC26A6Q9BXS9 759 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 MROH5Q6ZUA9 1318 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 RPL13P26373 211 aaKnown RBP12.61□□□□□ -0.39
VPS8-227ENST00000625842 SLC1A4P43007 532 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 ZNF790Q6PG37 636 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 CCDC83Q8IWF9 413 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 FNBP1Q96RU3 617 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 NUP62CLQ9H1M0 184 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 TSPY26PQ9H489 355 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 UTP14CQ5TAP6 766 aaKnown RBP12.61□□□□□ -0.39
VPS8-227ENST00000625842 HAUS3Q68CZ6 603 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 TMEM57Q8N5G2 664 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 PPM1EQ8WY54 764 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 NEK1Q96PY6 1258 aa12.61□□□□□ -0.39
VPS8-227ENST00000625842 JPH2Q9BR39 696 aaPredicted RBP12.61□□□□□ -0.39
VPS8-227ENST00000625842 YEATS4O95619 227 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms