RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 LPIN3Q9BQK8 851 aa4.54□□□□□ -1.68
SCARNA4-202ENST00000625402 TRIM56Q9BRZ2 755 aaKnown RBP4.54□□□□□ -1.68
SCARNA4-202ENST00000625402 PBX4Q9BYU1 374 aa4.54□□□□□ -1.68
SCARNA4-202ENST00000625402 SRCIN1Q9C0H9 1055 aa4.54□□□□□ -1.68
SCARNA4-202ENST00000625402 AVENQ9NQS1 362 aaPredicted RBP4.54□□□□□ -1.68
SCARNA4-202ENST00000625402 PCDHGB7Q9Y5F8 929 aa4.54□□□□□ -1.68
SCARNA4-202ENST00000625402 USP31Q70CQ4 1352 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 TMEM238LA0A1B0GVL6 79 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 ADARB2-AS1A8MUL3 147 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 GSTT1P30711 240 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 FAAP100Q0VG06 881 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 NEUROD1Q13562 356 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 ZNF394Q53GI3 561 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 FAM35AQ86V20 835 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 NPAS3Q8IXF0 933 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 TMEM102Q8N9M5 508 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 NXPE3Q969Y0 559 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 METTL5Q9NRN9 209 aaKnown RBP4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 GGA1Q9UJY5 639 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 TRAK1Q9UPV9 953 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 STARD13Q9Y3M8 1113 aa4.53□□□□□ -1.68
SCARNA4-202ENST00000625402 F6X3S4 739 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 PDE2AO00408 941 aaPredicted RBP4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 GHRHP01286 108 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 CELA3AP09093 270 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 ITPKAP23677 461 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 ERCC5P28715 1186 aaPredicted RBP4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 MAP2K3P46734 347 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 ST13P50502 369 aaKnown RBP4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 RACK1P63244 317 aaKnown RBP4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 PTPN12Q05209 780 aaKnown RBP4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 TAF1CQ15572 869 aaPredicted RBP4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 SLCO4C1Q6ZQN7 724 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 ERMP1Q7Z2K6 904 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 RNF34Q969K3 372 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 ACDQ96AP0 544 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 PLD4Q96BZ4 506 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 POP1Q99575 1024 aaKnown RBP4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 BCL11AQ9H165 835 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 MUC3BQ9H195 1237 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 ZNF576Q9H609 170 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 COPRSQ9NQ92 184 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 TTF2Q9UNY4 1162 aaKnown RBP4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 TRIM33Q9UPN9 1127 aa4.52□□□□□ -1.69
SCARNA4-202ENST00000625402 ADAMTS2O95450 1211 aa4.51□□□□□ -1.69
SCARNA4-202ENST00000625402 ALBP02768 609 aa4.51□□□□□ -1.69
SCARNA4-202ENST00000625402 CEP135Q66GS9 1140 aa4.51□□□□□ -1.69
SCARNA4-202ENST00000625402 PSAPL1Q6NUJ1 521 aa4.51□□□□□ -1.69
SCARNA4-202ENST00000625402 DTHD1Q6ZMT9 781 aa4.51□□□□□ -1.69
SCARNA4-202ENST00000625402 ASAP3Q8TDY4 903 aa4.51□□□□□ -1.69
SCARNA4-202ENST00000625402 SPACA7Q96KW9 195 aa4.51□□□□□ -1.69
SCARNA4-202ENST00000625402 TINF2Q9BSI4 451 aa4.51□□□□□ -1.69
SCARNA4-202ENST00000625402 SMG9Q9H0W8 520 aaKnown RBP4.51□□□□□ -1.69
SCARNA4-202ENST00000625402 SOX13Q9UN79 622 aa4.51□□□□□ -1.69
SCARNA4-202ENST00000625402 ELOA3CA0A087WX78 387 aaPredicted RBP4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 A0A096LPE4 126 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 A0A1W2PPZ6 126 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 ELOA3DA6NLF2 546 aaPredicted RBP4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 SHISA8B8ZZ34 492 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 ENC1O14682 589 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 PAGE1O75459 146 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 EPXP11678 715 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 ITGAEP38570 1179 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 TNNI2P48788 182 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 SRSF11Q05519 484 aaKnown RBP4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 GRIK5Q16478 980 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 ELOA3BQ3SY89 546 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 RASIP1Q5U651 963 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 TPTE2Q6XPS3 522 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 C8orf86Q6ZUL3 223 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 VN1R5Q7Z5H4 357 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 GOLGA6L1Q8N7Z2 621 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 ELOA3Q8NG57 546 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 ANKRD24Q8TF21 1146 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 ZNF775Q96BV0 537 aaPredicted RBP4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 C8orf37Q96NL8 207 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 LACRTQ9GZZ8 138 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 ACBD3Q9H3P7 528 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 SRA1Q9HD15 236 aaKnown RBP4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 SH2B1Q9NRF2 756 aaPredicted RBP4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 PPM1HQ9ULR3 514 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 AKAP2Q9Y2D5 859 aa4.5□□□□□ -1.69
SCARNA4-202ENST00000625402 SMNDC1O75940 238 aaKnown RBP eCLIP4.49□□□□□ -1.69not detected■■■□□ 18.4
SCARNA4-202ENST00000625402 XRCC5P13010 732 aaKnown RBP4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 EPHA1P21709 976 aa4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 ZC3H6P61129 1189 aaKnown RBP4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 CCDC85BQ15834 202 aaPredicted RBP4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 NAALADL2Q58DX5 795 aa4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 LCE2AQ5TA79 106 aaPredicted RBP4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 HGSNATQ68CP4 663 aa4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 ELMSAN1Q6PJG2 1045 aa4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 C20orf204Q6ZNR8 217 aa4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 HS2ST1Q7LGA3 356 aa4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 USP48Q86UV5 1035 aa4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 NUDT8Q8WV74 236 aa4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 NECAB3Q96P71 396 aaPredicted RBP4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 NOC4LQ9BVI4 516 aaKnown RBP4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 TGIF2Q9GZN2 237 aa4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 SEC31BQ9NQW1 1179 aa4.49□□□□□ -1.69
SCARNA4-202ENST00000625402 KBTBD4Q9NVX7 518 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms