RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 TIMM10P62072 90 aa17.88■□□□□ 0.45
LINC00552-201ENST00000625151 CCT2P78371 535 aaKnown RBP17.88■□□□□ 0.45
LINC00552-201ENST00000625151 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
LINC00552-201ENST00000625151 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.88■□□□□ 0.45
LINC00552-201ENST00000625151 EXOSC10Q01780 885 aaKnown RBP17.87■□□□□ 0.45
LINC00552-201ENST00000625151 CHAF1AQ13111 956 aaPredicted RBP17.87■□□□□ 0.45
LINC00552-201ENST00000625151 NAA16Q6N069 864 aaPredicted RBP17.87■□□□□ 0.45
LINC00552-201ENST00000625151 ZSCAN25Q6NSZ9 544 aa17.87■□□□□ 0.45
LINC00552-201ENST00000625151 GOLPH3LQ9H4A5 285 aa17.87■□□□□ 0.45
LINC00552-201ENST00000625151 NCOA5Q9HCD5 579 aaKnown RBP17.87■□□□□ 0.45
LINC00552-201ENST00000625151 AHDC1Q5TGY3 1603 aaPredicted RBP17.87■□□□□ 0.45
LINC00552-201ENST00000625151 C11orf57Q6ZUT1 292 aaPredicted RBP17.87■□□□□ 0.45
LINC00552-201ENST00000625151 DSCC1Q9BVC3 393 aa17.87■□□□□ 0.45
LINC00552-201ENST00000625151 HELLSQ9NRZ9 838 aa17.87■□□□□ 0.45
LINC00552-201ENST00000625151 ABCC6O95255 1503 aa17.87■□□□□ 0.45
LINC00552-201ENST00000625151 NUP188Q5SRE5 1749 aa17.87■□□□□ 0.45
LINC00552-201ENST00000625151 H7C1W4 665 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 IQCB1Q15051 598 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 CCAR1Q8IX12 1150 aaKnown RBP17.86■□□□□ 0.45
LINC00552-201ENST00000625151 USP28Q96RU2 1077 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 AGXT2Q9BYV1 514 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 RCOR1Q9UKL0 485 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 NBPF26B4DH59 902 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 CABP4P57796 275 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 CCDC144BQ3MJ40 725 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 ZMYM1Q5SVZ6 1142 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 NBPF14Q5TI25 921 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 NBPF10Q6P3W6 841 aaKnown RBP17.86■□□□□ 0.45
LINC00552-201ENST00000625151 CCDC144CPQ8IYA2 1237 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 NBPF15Q8N660 670 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 CLIP2Q9UDT6 1046 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.86■□□□□ 0.45
LINC00552-201ENST00000625151 E7EWF7 191 aa17.86■□□□□ 0.45
LINC00552-201ENST00000625151 HSPD1P10809 573 aaKnown RBP17.86■□□□□ 0.45
LINC00552-201ENST00000625151 SALL1Q9NSC2 1324 aa17.85■□□□□ 0.45
LINC00552-201ENST00000625151 SNW1Q13573 536 aaKnown RBP17.85■□□□□ 0.45
LINC00552-201ENST00000625151 TTLL7Q6ZT98 887 aa17.85■□□□□ 0.45
LINC00552-201ENST00000625151 CHST3Q7LGC8 479 aa17.85■□□□□ 0.45
LINC00552-201ENST00000625151 CACTINQ8WUQ7 758 aaKnown RBP17.85■□□□□ 0.45
LINC00552-201ENST00000625151 MAST3O60307 1309 aa17.85■□□□□ 0.45
LINC00552-201ENST00000625151 LRRC24Q50LG9 513 aa17.85■□□□□ 0.45
LINC00552-201ENST00000625151 C16orf45Q96MC5 204 aaPredicted RBP17.85■□□□□ 0.45
LINC00552-201ENST00000625151 A0A087WWV3 80 aa17.84■□□□□ 0.45
LINC00552-201ENST00000625151 CAVIN2O95810 425 aa17.84■□□□□ 0.45
LINC00552-201ENST00000625151 GUCY1B3Q02153 619 aa17.84■□□□□ 0.45
LINC00552-201ENST00000625151 ILDR1Q86SU0 546 aaPredicted RBP17.84■□□□□ 0.45
LINC00552-201ENST00000625151 ZNF594Q96JF6 807 aaPredicted RBP17.84■□□□□ 0.45
LINC00552-201ENST00000625151 STRN4Q9NRL3 753 aa17.84■□□□□ 0.45
LINC00552-201ENST00000625151 NAP1L2Q9ULW6 460 aaPredicted RBP17.84■□□□□ 0.45
LINC00552-201ENST00000625151 COL5A2P05997 1499 aaPredicted RBP17.84■□□□□ 0.45
LINC00552-201ENST00000625151 UBAP1LF5GYI3 381 aa17.83■□□□□ 0.44
LINC00552-201ENST00000625151 CTIFO43310 598 aaKnown RBP17.83■□□□□ 0.44
LINC00552-201ENST00000625151 PDIA3P30101 505 aaKnown RBP17.83■□□□□ 0.44
LINC00552-201ENST00000625151 GPR108Q9NPR9 543 aa17.83■□□□□ 0.44
LINC00552-201ENST00000625151 NWD2Q9ULI1 1742 aa17.83■□□□□ 0.44
LINC00552-201ENST00000625151 TOM1O60784 492 aa17.83■□□□□ 0.44
LINC00552-201ENST00000625151 CDC25BP30305 580 aa17.83■□□□□ 0.44
LINC00552-201ENST00000625151 IL15P40933 162 aaPredicted RBP17.83■□□□□ 0.44
LINC00552-201ENST00000625151 STX1AQ16623 288 aa17.83■□□□□ 0.44
LINC00552-201ENST00000625151 TTLL5Q6EMB2 1281 aa17.83■□□□□ 0.44
LINC00552-201ENST00000625151 CWC25Q9NXE8 425 aaPredicted RBP17.83■□□□□ 0.44
LINC00552-201ENST00000625151 PARP4Q9UKK3 1724 aaKnown RBP17.82■□□□□ 0.44
LINC00552-201ENST00000625151 GOLGA6L19H0YKK7 550 aa17.82■□□□□ 0.44
LINC00552-201ENST00000625151 M0R2C6 588 aa17.82■□□□□ 0.44
LINC00552-201ENST00000625151 CTAGE5O15320 804 aa17.82■□□□□ 0.44
LINC00552-201ENST00000625151 IFIT1P09914 478 aaKnown RBP17.82■□□□□ 0.44
LINC00552-201ENST00000625151 SARM1Q6SZW1 724 aa17.82■□□□□ 0.44
LINC00552-201ENST00000625151 ENGASEQ8NFI3 743 aa17.82■□□□□ 0.44
LINC00552-201ENST00000625151 SPEF2Q9C093 1822 aa17.82■□□□□ 0.44
LINC00552-201ENST00000625151 COL16A1Q07092 1604 aaPredicted RBP17.82■□□□□ 0.44
LINC00552-201ENST00000625151 PHLPP1O60346 1717 aa17.82■□□□□ 0.44
LINC00552-201ENST00000625151 RNF113AO15541 343 aaKnown RBP17.82■□□□□ 0.44
LINC00552-201ENST00000625151 CCDC73Q6ZRK6 1079 aa17.82■□□□□ 0.44
LINC00552-201ENST00000625151 WDR17Q8IZU2 1322 aa17.81■□□□□ 0.44
LINC00552-201ENST00000625151 CARMIL3Q8ND23 1372 aa17.81■□□□□ 0.44
LINC00552-201ENST00000625151 A0A1B0GUL7 405 aa17.81■□□□□ 0.44
LINC00552-201ENST00000625151 EYA2O00167 538 aa17.81■□□□□ 0.44
LINC00552-201ENST00000625151 PPP4R3BQ5MIZ7 849 aa17.81■□□□□ 0.44
LINC00552-201ENST00000625151 TOM1L2Q6ZVM7 507 aa17.81■□□□□ 0.44
LINC00552-201ENST00000625151 ZNF274Q96GC6 653 aaPredicted RBP17.81■□□□□ 0.44
LINC00552-201ENST00000625151 ARID5BQ14865 1188 aa17.81■□□□□ 0.44
LINC00552-201ENST00000625151 SMAP1Q8IYB5 467 aaPredicted RBP17.81■□□□□ 0.44
LINC00552-201ENST00000625151 ANKRD7Q92527 254 aa17.81■□□□□ 0.44
LINC00552-201ENST00000625151 ERCC4Q92889 916 aaPredicted RBP17.81■□□□□ 0.44
LINC00552-201ENST00000625151 ZNF396Q96N95 335 aaPredicted RBP17.81■□□□□ 0.44
LINC00552-201ENST00000625151 PUS3Q9BZE2 481 aaKnown RBP17.81■□□□□ 0.44
LINC00552-201ENST00000625151 GPHNQ9NQX3 736 aaPredicted RBP17.81■□□□□ 0.44
LINC00552-201ENST00000625151 UBR2Q8IWV8 1755 aa17.8■□□□□ 0.44
LINC00552-201ENST00000625151 KINO60870 393 aaKnown RBP17.8■□□□□ 0.44
LINC00552-201ENST00000625151 FDPSP14324 419 aaKnown RBP17.8■□□□□ 0.44
LINC00552-201ENST00000625151 ME1P48163 572 aa17.8■□□□□ 0.44
LINC00552-201ENST00000625151 FAM160A1Q05DH4 1040 aa17.8■□□□□ 0.44
LINC00552-201ENST00000625151 FSIP1Q8NA03 581 aa17.8■□□□□ 0.44
LINC00552-201ENST00000625151 TNNT1P13805 278 aa17.8■□□□□ 0.44
LINC00552-201ENST00000625151 ATL3Q6DD88 541 aa17.8■□□□□ 0.44
LINC00552-201ENST00000625151 DHX40Q8IX18 779 aaKnown RBP17.8■□□□□ 0.44
LINC00552-201ENST00000625151 OSBP2Q969R2 916 aa17.8■□□□□ 0.44
LINC00552-201ENST00000625151 MRFAP1L1Q96HT8 127 aa17.8■□□□□ 0.44
LINC00552-201ENST00000625151 ZBTB3Q9H5J0 574 aa17.8■□□□□ 0.44
LINC00552-201ENST00000625151 PRDM10Q9NQV6 1147 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms