RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 ZC3H15Q8WU90 426 aaKnown RBP26.39■■□□□ 1.82
PCDHB4-202ENST00000623478 NOB1Q9ULX3 412 aaKnown RBP26.39■■□□□ 1.82
PCDHB4-202ENST00000623478 ZNF646O15015 1829 aaPredicted RBP26.38■■□□□ 1.81
PCDHB4-202ENST00000623478 RBM26Q5T8P6 1007 aaKnown RBP26.38■■□□□ 1.81
PCDHB4-202ENST00000623478 LDHAL6AQ6ZMR3 332 aa26.38■■□□□ 1.81
PCDHB4-202ENST00000623478 COA1Q9GZY4 146 aa26.38■■□□□ 1.81
PCDHB4-202ENST00000623478 USP44Q9H0E7 712 aa26.38■■□□□ 1.81
PCDHB4-202ENST00000623478 RARSP54136 660 aaKnown RBP26.37■■□□□ 1.81
PCDHB4-202ENST00000623478 HNRNPUQ00839 825 aaKnown RBP eCLIP26.37■■□□□ 1.81
PCDHB4-202ENST00000623478 ANKRD44Q8N8A2 993 aa26.37■■□□□ 1.81
PCDHB4-202ENST00000623478 AGBL3Q8NEM8 1001 aa26.37■■□□□ 1.81
PCDHB4-202ENST00000623478 MXD3Q9BW11 206 aa26.37■■□□□ 1.81
PCDHB4-202ENST00000623478 CNNM1Q9NRU3 951 aa26.37■■□□□ 1.81
PCDHB4-202ENST00000623478 KIF4BQ2VIQ3 1234 aa26.36■■□□□ 1.81
PCDHB4-202ENST00000623478 RABL6Q3YEC7 729 aaPredicted RBP26.36■■□□□ 1.81
PCDHB4-202ENST00000623478 CST9Q5W186 159 aa26.36■■□□□ 1.81
PCDHB4-202ENST00000623478 FBXW7Q969H0 707 aa26.36■■□□□ 1.81
PCDHB4-202ENST00000623478 GMLQ99445 158 aa26.36■■□□□ 1.81
PCDHB4-202ENST00000623478 IRS2Q9Y4H2 1338 aa26.36■■□□□ 1.81
PCDHB4-202ENST00000623478 DACT2Q5SW24 774 aa26.35■■□□□ 1.81
PCDHB4-202ENST00000623478 ABT1Q9ULW3 272 aaKnown RBP26.35■■□□□ 1.81
PCDHB4-202ENST00000623478 TRPM7Q96QT4 1865 aa26.34■■□□□ 1.81
PCDHB4-202ENST00000623478 PLIN1O60240 522 aa26.34■■□□□ 1.81
PCDHB4-202ENST00000623478 BRPF1P55201 1214 aaPredicted RBP26.34■■□□□ 1.81
PCDHB4-202ENST00000623478 ZNF280AP59817 542 aaPredicted RBP26.34■■□□□ 1.81
PCDHB4-202ENST00000623478 PUS3Q9BZE2 481 aaKnown RBP26.34■■□□□ 1.81
PCDHB4-202ENST00000623478 DLK2Q6UY11 383 aa26.33■■□□□ 1.81
PCDHB4-202ENST00000623478 ASTN2O75129 1339 aaPredicted RBP26.33■■□□□ 1.81
PCDHB4-202ENST00000623478 RASSF10A6NK89 507 aa26.32■■□□□ 1.8
PCDHB4-202ENST00000623478 USP17L8P0C7I0 530 aa26.32■■□□□ 1.8
PCDHB4-202ENST00000623478 VEGFBP49765 207 aa26.32■■□□□ 1.8
PCDHB4-202ENST00000623478 STRIP1Q5VSL9 837 aa26.32■■□□□ 1.8
PCDHB4-202ENST00000623478 CDC37L1Q7L3B6 337 aa26.32■■□□□ 1.8
PCDHB4-202ENST00000623478 USP48Q86UV5 1035 aa26.32■■□□□ 1.8
PCDHB4-202ENST00000623478 CELF2O95319 508 aaKnown RBP26.31■■□□□ 1.8
PCDHB4-202ENST00000623478 C15orf52Q6ZUT6 534 aaKnown RBP26.31■■□□□ 1.8
PCDHB4-202ENST00000623478 API5Q9BZZ5 524 aaKnown RBP26.31■■□□□ 1.8
PCDHB4-202ENST00000623478 CD209Q9NNX6 404 aa26.31■■□□□ 1.8
PCDHB4-202ENST00000623478 ZNF408Q9H9D4 720 aa26.3■■□□□ 1.8
PCDHB4-202ENST00000623478 MYOZ2Q9NPC6 264 aa26.3■■□□□ 1.8
PCDHB4-202ENST00000623478 GGA3Q9NZ52 723 aa26.3■■□□□ 1.8
PCDHB4-202ENST00000623478 ADM5C9JUS6 153 aa26.29■■□□□ 1.8
PCDHB4-202ENST00000623478 GTF2IP78347 998 aa26.29■■□□□ 1.8
PCDHB4-202ENST00000623478 DEFB115Q30KQ5 88 aa26.29■■□□□ 1.8
PCDHB4-202ENST00000623478 TTLL5Q6EMB2 1281 aa26.29■■□□□ 1.8
PCDHB4-202ENST00000623478 KRT26Q7Z3Y9 468 aa26.29■■□□□ 1.8
PCDHB4-202ENST00000623478 KLHDC4Q8TBB5 520 aa26.29■■□□□ 1.8
PCDHB4-202ENST00000623478 RIPOR2Q9Y4F9 1068 aa26.29■■□□□ 1.8
PCDHB4-202ENST00000623478 KIF16BQ96L93 1317 aa26.29■■□□□ 1.8
PCDHB4-202ENST00000623478 LRRC24Q50LG9 513 aa26.28■■□□□ 1.8
PCDHB4-202ENST00000623478 DCPSQ96C86 337 aaKnown RBP26.28■■□□□ 1.8
PCDHB4-202ENST00000623478 HSPA1AP0DMV8 641 aaKnown RBP26.27■■□□□ 1.8
PCDHB4-202ENST00000623478 HSPA1BP0DMV9 641 aaKnown RBP26.27■■□□□ 1.8
PCDHB4-202ENST00000623478 SCARF1Q14162 830 aa26.27■■□□□ 1.8
PCDHB4-202ENST00000623478 ZNF804AQ7Z570 1209 aa26.27■■□□□ 1.8
PCDHB4-202ENST00000623478 TLL2Q9Y6L7 1015 aa26.27■■□□□ 1.8
PCDHB4-202ENST00000623478 MYO3BQ8WXR4 1341 aa26.27■■□□□ 1.8
PCDHB4-202ENST00000623478 POLR2AP24928 1970 aaKnown RBP26.26■■□□□ 1.79
PCDHB4-202ENST00000623478 MROH5Q6ZUA9 1318 aa26.25■■□□□ 1.79
PCDHB4-202ENST00000623478 BCAR3O75815 825 aa26.25■■□□□ 1.79
PCDHB4-202ENST00000623478 UBTFL1P0CB47 393 aaPredicted RBP26.25■■□□□ 1.79
PCDHB4-202ENST00000623478 ANGEL2Q5VTE6 544 aaKnown RBP26.25■■□□□ 1.79
PCDHB4-202ENST00000623478 IL1R1P14778 569 aa26.24■■□□□ 1.79
PCDHB4-202ENST00000623478 UBE4AQ14139 1066 aa26.24■■□□□ 1.79
PCDHB4-202ENST00000623478 PAXIP1Q6ZW49 1069 aaPredicted RBP26.24■■□□□ 1.79
PCDHB4-202ENST00000623478 KIAA0825Q8IV33 1275 aa26.24■■□□□ 1.79
PCDHB4-202ENST00000623478 ARHGAP45Q92619 1136 aa26.24■■□□□ 1.79
PCDHB4-202ENST00000623478 JAG2Q9Y219 1238 aa26.24■■□□□ 1.79
PCDHB4-202ENST00000623478 WDR33Q9C0J8 1336 aaKnown RBP26.23■■□□□ 1.79
PCDHB4-202ENST00000623478 METTL24Q5JXM2 366 aa26.23■■□□□ 1.79
PCDHB4-202ENST00000623478 SAPCD2Q86UD0 394 aa26.23■■□□□ 1.79
PCDHB4-202ENST00000623478 SULF1Q8IWU6 871 aa26.23■■□□□ 1.79
PCDHB4-202ENST00000623478 OGFOD1Q8N543 542 aa26.23■■□□□ 1.79
PCDHB4-202ENST00000623478 CERS5Q8N5B7 392 aa26.23■■□□□ 1.79
PCDHB4-202ENST00000623478 TNNQ9UQP3 1299 aa26.23■■□□□ 1.79
PCDHB4-202ENST00000623478 GYG1P46976 350 aa26.22■■□□□ 1.79
PCDHB4-202ENST00000623478 RFX5P48382 616 aaPredicted RBP26.22■■□□□ 1.79
PCDHB4-202ENST00000623478 GRM1Q13255 1194 aa26.22■■□□□ 1.79
PCDHB4-202ENST00000623478 NBPF9Q3BBW0 867 aa26.22■■□□□ 1.79
PCDHB4-202ENST00000623478 CYP4F22Q6NT55 531 aa26.22■■□□□ 1.79
PCDHB4-202ENST00000623478 CAPNS2Q96L46 248 aa26.22■■□□□ 1.79
PCDHB4-202ENST00000623478 MEIS3Q99687 375 aa26.22■■□□□ 1.79
PCDHB4-202ENST00000623478 SCAF8Q9UPN6 1271 aaKnown RBP26.22■■□□□ 1.79
PCDHB4-202ENST00000623478 LRRFIP2Q9Y608 721 aaKnown RBP26.22■■□□□ 1.79
PCDHB4-202ENST00000623478 TRIM27P14373 513 aa26.21■■□□□ 1.79
PCDHB4-202ENST00000623478 INTS3Q68E01 1043 aaKnown RBP26.21■■□□□ 1.79
PCDHB4-202ENST00000623478 VGLL2Q8N8G2 317 aa26.21■■□□□ 1.79
PCDHB4-202ENST00000623478 FRAT1Q92837 279 aaPredicted RBP26.21■■□□□ 1.79
PCDHB4-202ENST00000623478 SASH1O94885 1247 aa26.2■■□□□ 1.78
PCDHB4-202ENST00000623478 ZBED9Q6R2W3 1325 aa26.19■■□□□ 1.78
PCDHB4-202ENST00000623478 THSD7BQ9C0I4 1608 aa26.19■■□□□ 1.78
PCDHB4-202ENST00000623478 WNT10BO00744 389 aa26.19■■□□□ 1.78
PCDHB4-202ENST00000623478 PTPN12Q05209 780 aaKnown RBP26.19■■□□□ 1.78
PCDHB4-202ENST00000623478 FAM84BQ96KN1 310 aaPredicted RBP26.19■■□□□ 1.78
PCDHB4-202ENST00000623478 IPO8O15397 1037 aaKnown RBP26.18■■□□□ 1.78
PCDHB4-202ENST00000623478 PDE8BO95263 885 aa26.18■■□□□ 1.78
PCDHB4-202ENST00000623478 HIBADHP31937 336 aaKnown RBP26.18■■□□□ 1.78
PCDHB4-202ENST00000623478 ATF7IPQ6VMQ6 1270 aa26.18■■□□□ 1.78
PCDHB4-202ENST00000623478 CDCA5Q96FF9 252 aa26.18■■□□□ 1.78
PCDHB4-202ENST00000623478 PITPNM2Q9BZ72 1349 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms