RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 BEGAINQ9BUH8 593 aa11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 GBA2Q9HCG7 927 aaPredicted RBP11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 SNAP23O00161 211 aa11.69□□□□□ -0.54
PCDHB9-202ENST00000623266 USP17L8P0C7I0 530 aa11.69□□□□□ -0.54
PCDHB9-202ENST00000623266 NBPF9Q3BBW0 867 aa11.69□□□□□ -0.54
PCDHB9-202ENST00000623266 DACT2Q5SW24 774 aa11.69□□□□□ -0.54
PCDHB9-202ENST00000623266 ANGEL2Q5VTE6 544 aaKnown RBP11.69□□□□□ -0.54
PCDHB9-202ENST00000623266 CSRNP1Q96S65 589 aa11.69□□□□□ -0.54
PCDHB9-202ENST00000623266 CDC5LQ99459 802 aaKnown RBP11.69□□□□□ -0.54
PCDHB9-202ENST00000623266 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
PCDHB9-202ENST00000623266 GGA3Q9NZ52 723 aa11.69□□□□□ -0.54
PCDHB9-202ENST00000623266 ZNF609O15014 1411 aa11.69□□□□□ -0.54
PCDHB9-202ENST00000623266 FANCIQ9NVI1 1328 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 F6X3S4 739 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 ITGA6P23229 1130 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 KLRK1P26718 216 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 FOXO4P98177 505 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 KIF23Q02241 960 aaPredicted RBP11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 NOGQ13253 232 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 PRAMEF18Q5VWM3 479 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 LINS1Q8NG48 757 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 DNAAF4Q8WXU2 420 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 CDCA5Q96FF9 252 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 MRS2Q9HD23 443 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 LEMD3Q9Y2U8 911 aa11.68□□□□□ -0.54
PCDHB9-202ENST00000623266 IRS2Q9Y4H2 1338 aa11.67□□□□□ -0.54
PCDHB9-202ENST00000623266 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
PCDHB9-202ENST00000623266 ZNF157P51786 506 aaPredicted RBP11.67□□□□□ -0.54
PCDHB9-202ENST00000623266 FKBP5Q13451 457 aaPredicted RBP11.67□□□□□ -0.54
PCDHB9-202ENST00000623266 BEND3Q5T5X7 828 aa11.67□□□□□ -0.54
PCDHB9-202ENST00000623266 MOB2Q70IA6 237 aa11.67□□□□□ -0.54
PCDHB9-202ENST00000623266 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
PCDHB9-202ENST00000623266 CCDC102AQ96A19 550 aa11.67□□□□□ -0.54
PCDHB9-202ENST00000623266 MED23Q9ULK4 1368 aa11.67□□□□□ -0.54
PCDHB9-202ENST00000623266 AKAP11Q9UKA4 1901 aa11.66□□□□□ -0.54
PCDHB9-202ENST00000623266 ZNF804BA4D1E1 1349 aa11.66□□□□□ -0.54
PCDHB9-202ENST00000623266 WNT10BO00744 389 aa11.66□□□□□ -0.54
PCDHB9-202ENST00000623266 CA12O43570 354 aa11.66□□□□□ -0.54
PCDHB9-202ENST00000623266 FAM161AQ3B820 660 aa11.66□□□□□ -0.54
PCDHB9-202ENST00000623266 EPHA10Q5JZY3 1008 aa11.66□□□□□ -0.54
PCDHB9-202ENST00000623266 STRIP1Q5VSL9 837 aa11.66□□□□□ -0.54
PCDHB9-202ENST00000623266 TTLL5Q6EMB2 1281 aa11.66□□□□□ -0.54
PCDHB9-202ENST00000623266 HELBQ8NG08 1087 aaPredicted RBP11.66□□□□□ -0.54
PCDHB9-202ENST00000623266 COA1Q9GZY4 146 aa11.66□□□□□ -0.54
PCDHB9-202ENST00000623266 UBE2Q2LH0YL09 131 aa11.65□□□□□ -0.54
PCDHB9-202ENST00000623266 TAF5LO75529 589 aa11.65□□□□□ -0.54
PCDHB9-202ENST00000623266 TRPA1O75762 1119 aa11.65□□□□□ -0.54
PCDHB9-202ENST00000623266 IGHMBP2P38935 993 aaKnown RBP11.65□□□□□ -0.54
PCDHB9-202ENST00000623266 RGS19P49795 217 aa11.65□□□□□ -0.54
PCDHB9-202ENST00000623266 CHRNDQ07001 517 aa11.65□□□□□ -0.54
PCDHB9-202ENST00000623266 ZBED3Q96IU2 234 aaPredicted RBP11.65□□□□□ -0.54
PCDHB9-202ENST00000623266 MCOLN1Q9GZU1 580 aa11.65□□□□□ -0.54
PCDHB9-202ENST00000623266 ANKRD2Q9GZV1 360 aa11.65□□□□□ -0.54
PCDHB9-202ENST00000623266 RNF186Q9NXI6 227 aa11.65□□□□□ -0.54
PCDHB9-202ENST00000623266 PITPNM2Q9BZ72 1349 aa11.64□□□□□ -0.55
PCDHB9-202ENST00000623266 CCDC85CA6NKD9 419 aa11.64□□□□□ -0.55
PCDHB9-202ENST00000623266 ANP32CO43423 234 aa11.64□□□□□ -0.55
PCDHB9-202ENST00000623266 SLC10A3P09131 477 aa11.64□□□□□ -0.55
PCDHB9-202ENST00000623266 GTF2IP78347 998 aa11.64□□□□□ -0.55
PCDHB9-202ENST00000623266 ZNF594Q96JF6 807 aaPredicted RBP11.64□□□□□ -0.55
PCDHB9-202ENST00000623266 MPHOSPH8Q99549 860 aa11.64□□□□□ -0.55
PCDHB9-202ENST00000623266 CD209Q9NNX6 404 aa11.64□□□□□ -0.55
PCDHB9-202ENST00000623266 ANKRD18BA2A2Z9 1011 aa11.63□□□□□ -0.55
PCDHB9-202ENST00000623266 LMBR1LQ6UX01 489 aa11.63□□□□□ -0.55
PCDHB9-202ENST00000623266 FAM9BQ8IZU0 186 aa11.63□□□□□ -0.55
PCDHB9-202ENST00000623266 CERS5Q8N5B7 392 aa11.63□□□□□ -0.55
PCDHB9-202ENST00000623266 KAZALD1Q96I82 304 aa11.63□□□□□ -0.55
PCDHB9-202ENST00000623266 MYH16Q9H6N6 1097 aa11.63□□□□□ -0.55
PCDHB9-202ENST00000623266 PCDHAC2Q9Y5I4 1007 aa11.63□□□□□ -0.55
PCDHB9-202ENST00000623266 FKBP1BP68106 108 aa11.62□□□□□ -0.55
PCDHB9-202ENST00000623266 DGKZQ13574 1117 aa11.62□□□□□ -0.55
PCDHB9-202ENST00000623266 C15orf52Q6ZUT6 534 aaKnown RBP11.62□□□□□ -0.55
PCDHB9-202ENST00000623266 RASAL3Q86YV0 1011 aa11.62□□□□□ -0.55
PCDHB9-202ENST00000623266 KIAA0825Q8IV33 1275 aa11.62□□□□□ -0.55
PCDHB9-202ENST00000623266 OGFOD1Q8N543 542 aa11.62□□□□□ -0.55
PCDHB9-202ENST00000623266 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
PCDHB9-202ENST00000623266 A0A1B0GUL6 1792 aa11.62□□□□□ -0.55
PCDHB9-202ENST00000623266 SASH1O94885 1247 aa11.61□□□□□ -0.55
PCDHB9-202ENST00000623266 IL1R1P14778 569 aa11.61□□□□□ -0.55
PCDHB9-202ENST00000623266 IFIT5Q13325 482 aaKnown RBP11.61□□□□□ -0.55
PCDHB9-202ENST00000623266 SAGE1Q9NXZ1 904 aa11.61□□□□□ -0.55
PCDHB9-202ENST00000623266 TNRC18O15417 2968 aaPredicted RBP11.61□□□□□ -0.55
PCDHB9-202ENST00000623266 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 GRM8O00222 908 aa11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 PLIN1O60240 522 aa11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 ZEB1P37275 1124 aaPredicted RBP11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 TM4SF4P48230 202 aa11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 MMP14P50281 582 aa11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 PRMT6Q96LA8 375 aaPredicted RBP11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 PUS3Q9BZE2 481 aaKnown RBP11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 FZD1Q9UP38 647 aa11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 AOX1Q06278 1338 aa11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
PCDHB9-202ENST00000623266 NBPF7P0C2Y1 421 aaPredicted RBP11.59□□□□□ -0.55
PCDHB9-202ENST00000623266 LDLRAD1Q5T700 205 aa11.59□□□□□ -0.55
PCDHB9-202ENST00000623266 LDHAL6AQ6ZMR3 332 aa11.59□□□□□ -0.55
PCDHB9-202ENST00000623266 MTMR14Q8NCE2 650 aa11.59□□□□□ -0.55
PCDHB9-202ENST00000623266 CHMP3Q9Y3E7 222 aa11.59□□□□□ -0.55
PCDHB9-202ENST00000623266 PAPPA2Q9BXP8 1791 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms