RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 ASIC1P78348 528 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 TMC6Q7Z403 805 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 RRP36Q96EU6 259 aaKnown RBP13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 CHMP6Q96FZ7 201 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 NSFL1CQ9UNZ2 370 aaKnown RBP13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 ATP6V1E1P36543 226 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 IRX5P78411 483 aaPredicted RBP13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 NIP7Q9Y221 180 aaKnown RBP eCLIP13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 TRPC3Q13507 836 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 RAB3GAP1Q15042 981 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 HS2ST1Q7LGA3 356 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 FAM193BQ96PV7 902 aaPredicted RBP13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 SEPT10Q9P0V9 454 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 AFMP43652 599 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 DNAAF4Q8WXU2 420 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 LMTK3Q96Q04 1460 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 PLCB4Q15147 1175 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 BANK1Q8NDB2 785 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 SELENOSQ9BQE4 189 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 PPFIA3O75145 1194 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 STK10O94804 968 aaKnown RBP13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 STMN4Q9H169 189 aaPredicted RBP13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 TTLL3Q9Y4R7 772 aa13.73□□□□□ -0.21
SLC6A6-210ENST00000622186 NAIPQ13075 1403 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 SORBS3O60504 671 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 EHBP1Q8NDI1 1231 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 GNAQP50148 359 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 CCDC110Q8TBZ0 833 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 OATP04181 439 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 KRT23Q9C075 422 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 CCDC88BA6NC98 1476 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 APBA3O96018 575 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 DDB1Q16531 1140 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 LMBR1Q8WVP7 490 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 CTAGE5O15320 804 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 RAPGEF3O95398 923 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 ZNF569Q5MCW4 686 aa13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 RBM17Q96I25 401 aaKnown RBP13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 RAB3IPQ96QF0 476 aaPredicted RBP13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 SH2B1Q9NRF2 756 aaPredicted RBP13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
SLC6A6-210ENST00000622186 BAG6P46379 1132 aa13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 UTP14CQ5TAP6 766 aaKnown RBP13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 TTC14Q96N46 770 aa13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 MAP3K2Q9Y2U5 619 aa13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 HSPA1LP34931 641 aa13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 PPP1R7Q15435 360 aa13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 HACE1Q8IYU2 909 aa13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 ESR2Q92731 530 aa13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 PPANQ9NQ55 473 aaKnown RBP13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 SMIM23A6NLE4 172 aa13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 DIXDC1Q155Q3 683 aa13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 JARID2Q92833 1246 aaPredicted RBP13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 FEZ2Q9UHY8 353 aaPredicted RBP13.71□□□□□ -0.21
SLC6A6-210ENST00000622186 PAGR1Q9BTK6 254 aa13.71□□□□□ -0.22
SLC6A6-210ENST00000622186 SYCE3A1L190 88 aa13.71□□□□□ -0.22
SLC6A6-210ENST00000622186 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.22
SLC6A6-210ENST00000622186 SPDYE6P0CI01 402 aa13.71□□□□□ -0.22
SLC6A6-210ENST00000622186 TPTE2Q6XPS3 522 aa13.71□□□□□ -0.22
SLC6A6-210ENST00000622186 IPO4Q8TEX9 1081 aaKnown RBP13.71□□□□□ -0.22
SLC6A6-210ENST00000622186 PSPC1Q8WXF1 523 aaKnown RBP13.71□□□□□ -0.22
SLC6A6-210ENST00000622186 CCDC169A6NNP5 214 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 STRN3Q13033 797 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 ARHGEF6Q15052 776 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 CD2APQ9Y5K6 639 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 PLCG2P16885 1265 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 KRT79Q5XKE5 535 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 RBM46Q8TBY0 533 aaKnown RBP13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 SLC5A4Q9NY91 659 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 PDCL2Q8N4E4 241 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 DBF4Q9UBU7 674 aaPredicted RBP13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 HSPA4P34932 840 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 CCDC102BQ68D86 513 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 AFAP1L2Q8N4X5 818 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 DACT3Q96B18 629 aaPredicted RBP13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 FAM184BQ9ULE4 1060 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 AZI2Q9H6S1 392 aa13.7□□□□□ -0.22
SLC6A6-210ENST00000622186 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 GTF2F1P35269 517 aaKnown RBP eCLIP13.69□□□□□ -0.222e-7■■■■□ 24.8
SLC6A6-210ENST00000622186 CYLC1P35663 651 aaPredicted RBP13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 ATRIPQ8WXE1 791 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 ZNF644Q9H582 1327 aaPredicted RBP13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 PDE3AQ14432 1141 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 PTPDC1A2A3K4 754 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 MYCLP12524 364 aaPredicted RBP13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 ERCC3P19447 782 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 UBE3BQ7Z3V4 1068 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 IFT74Q96LB3 600 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 MAGEB6P1A0A0J9YX57 407 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 GADL1Q6ZQY3 521 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 SRRTQ9BXP5 876 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms