RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	ZIC5	Q96T25	663 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	CDC5L	Q99459	802 aa	Known RBP	5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	EYA3	Q99504	573 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	MPHOSPH8	Q99549	860 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	ZC3H12C	Q9C0D7	883 aa	Known RBP	5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	SRCIN1	Q9C0H9	1055 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	SIL1	Q9H173	461 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	BICC1	Q9H694	974 aa	Known RBP	5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	ADARB2	Q9NS39	739 aa	Known RBP	5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	THSD7B	Q9C0I4	1608 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	CNTNAP1	P78357	1384 aa		5.66	□□□□□ -1.5
LINC00649-219	ENST00000622171	ANKRD18B	A2A2Z9	1011 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	TMEM88B	A6NKF7	163 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171		E9PSI1	815 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	FOXN1	O15353	648 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	GYG1	P46976	350 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	GTF2I	P78347	998 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	MKRN3	Q13064	507 aa	Known RBP	5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	CHAF1A	Q13111	956 aa	Predicted RBP	5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	IFIT5	Q13325	482 aa	Known RBP	5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	TNIP1	Q15025	636 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	LRRC24	Q50LG9	513 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	ANGEL2	Q5VTE6	544 aa	Known RBP	5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	CST9	Q5W186	159 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	FRAT1	Q92837	279 aa	Predicted RBP	5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	CLUAP1	Q96AJ1	413 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	BCL11A	Q9H165	835 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	CNNM1	Q9NRU3	951 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	CREBZF	Q9NS37	354 aa		5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	NOB1	Q9ULX3	412 aa	Known RBP	5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	PA2G4	Q9UQ80	394 aa	Known RBP	5.65	□□□□□ -1.5
LINC00649-219	ENST00000622171	MYH2	Q9UKX2	1941 aa		5.65	□□□□□ -1.51
LINC00649-219	ENST00000622171	ZNF804B	A4D1E1	1349 aa		5.65	□□□□□ -1.51
LINC00649-219	ENST00000622171	MED23	Q9ULK4	1368 aa		5.65	□□□□□ -1.51
LINC00649-219	ENST00000622171	ZSWIM8	A7E2V4	1837 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	CLRN2	A0PK11	232 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171		H7C1D1	291 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	BCAR3	O75815	825 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	ATP2B4	P23634	1241 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	SCARF1	Q14162	830 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	GRIK5	Q16478	980 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	NBPF9	Q3BBW0	867 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	RSBN1L	Q6PCB5	846 aa	Predicted RBP	5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	USP50	Q70EL3	339 aa	Predicted RBP	5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	KRT26	Q7Z3Y9	468 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	PNMA8A	Q86V59	439 aa	Predicted RBP	5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	CERS5	Q8N5B7	392 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	ANKRD44	Q8N8A2	993 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	CAPNS2	Q96L46	248 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	C1orf115	Q9H7X2	142 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	BSDC1	Q9NW68	430 aa	Predicted RBP	5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	PODXL2	Q9NZ53	605 aa		5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	COL1A1	P02452	1464 aa	Predicted RBP	5.64	□□□□□ -1.51
LINC00649-219	ENST00000622171	USP17L3	A6NCW0	530 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	USP17L4	A6NCW7	530 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	CSF1R	P07333	972 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	CCDC57	Q2TAC2	916 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	LDHAL6A	Q6ZMR3	332 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	USP17L1	Q7RTZ2	530 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	TMC4	Q7Z404	712 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	CDAN1	Q8IWY9	1227 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	CDCA5	Q96FF9	252 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	MEIS3	Q99687	375 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	PLA2G12B	Q9BX93	195 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	MYOZ2	Q9NPC6	264 aa		5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	LRRFIP2	Q9Y608	721 aa	Known RBP	5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	WDR33	Q9C0J8	1336 aa	Known RBP	5.63	□□□□□ -1.51
LINC00649-219	ENST00000622171	PAPPA2	Q9BXP8	1791 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	CDK5RAP2	Q96SN8	1893 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	CCER2	I3L3R5	266 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	ALDH1L1	O75891	902 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	VIL1	P09327	827 aa	Known RBP	5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	USP17L8	P0C7I0	530 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	RBM5	P52756	815 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	LBX1	P52954	281 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	RARS	P54136	660 aa	Known RBP	5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	CACNB3	P54284	484 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	HUNK	P57058	714 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	TTLL12	Q14166	644 aa	Predicted RBP	5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	DEFB115	Q30KQ5	88 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	GRIPAP1	Q4V328	841 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	METTL24	Q5JXM2	366 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	DACT2	Q5SW24	774 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	TNS4	Q8IZW8	715 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	JMY	Q8N9B5	988 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	DCPS	Q96C86	337 aa	Known RBP	5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	USP44	Q9H0E7	712 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	VEZT	Q9HBM0	779 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	IRS2	Q9Y4H2	1338 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	SSC5D	A1L4H1	1573 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	CENPF	P49454	3210 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	DOCK2	Q92608	1830 aa		5.62	□□□□□ -1.51
LINC00649-219	ENST00000622171	RASSF10	A6NK89	507 aa		5.61	□□□□□ -1.51
LINC00649-219	ENST00000622171	UBE2Q2L	H0YL09	131 aa		5.61	□□□□□ -1.51
LINC00649-219	ENST00000622171	ECM2	O94769	699 aa	Predicted RBP	5.61	□□□□□ -1.51
LINC00649-219	ENST00000622171	UBTFL1	P0CB47	393 aa	Predicted RBP	5.61	□□□□□ -1.51
LINC00649-219	ENST00000622171	HSP90B1	P14625	803 aa	Known RBP	5.61	□□□□□ -1.51
LINC00649-219	ENST00000622171	ADORA1	P30542	326 aa		5.61	□□□□□ -1.51
LINC00649-219	ENST00000622171	BCAM	P50895	628 aa		5.61	□□□□□ -1.51
LINC00649-219	ENST00000622171	TTLL5	Q6EMB2	1281 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms