RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 OSBP2Q969R2 916 aa22.75■■□□□ 1.23
PSPC1-206ENST00000619300 SH2B1Q9NRF2 756 aaPredicted RBP22.75■■□□□ 1.23
PSPC1-206ENST00000619300 DDX60Q8IY21 1712 aaKnown RBP22.75■■□□□ 1.23
PSPC1-206ENST00000619300 GOLGA6L22H0YM25 854 aa22.74■■□□□ 1.23
PSPC1-206ENST00000619300 UQCRFS1P1P0C7P4 283 aa22.74■■□□□ 1.23
PSPC1-206ENST00000619300 SLC5A1P13866 664 aa22.74■■□□□ 1.23
PSPC1-206ENST00000619300 ARID4AP29374 1257 aaPredicted RBP22.74■■□□□ 1.23
PSPC1-206ENST00000619300 SF3B3Q15393 1217 aaKnown RBP22.74■■□□□ 1.23
PSPC1-206ENST00000619300 M0R2C6 588 aa22.74■■□□□ 1.23
PSPC1-206ENST00000619300 CYP21A2P08686 494 aa22.74■■□□□ 1.23
PSPC1-206ENST00000619300 HSPD1P10809 573 aaKnown RBP22.74■■□□□ 1.23
PSPC1-206ENST00000619300 PHKA1P46020 1223 aa22.74■■□□□ 1.23
PSPC1-206ENST00000619300 TTF1Q15361 905 aaPredicted RBP22.74■■□□□ 1.23
PSPC1-206ENST00000619300 SLC10A5Q5PT55 438 aa22.74■■□□□ 1.23
PSPC1-206ENST00000619300 CDC5LQ99459 802 aaKnown RBP22.74■■□□□ 1.23
PSPC1-206ENST00000619300 SRP68Q9UHB9 627 aaKnown RBP22.74■■□□□ 1.23
PSPC1-206ENST00000619300 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.74■■□□□ 1.23
PSPC1-206ENST00000619300 ANKRD1Q15327 319 aa22.73■■□□□ 1.23
PSPC1-206ENST00000619300 BCL11BQ9C0K0 894 aaPredicted RBP22.73■■□□□ 1.23
PSPC1-206ENST00000619300 BRD1O95696 1058 aa22.72■■□□□ 1.23
PSPC1-206ENST00000619300 GTF2E1P29083 439 aaPredicted RBP22.72■■□□□ 1.23
PSPC1-206ENST00000619300 COL9A3Q14050 684 aaPredicted RBP22.72■■□□□ 1.23
PSPC1-206ENST00000619300 NEK1Q96PY6 1258 aa22.72■■□□□ 1.23
PSPC1-206ENST00000619300 SETDB2Q96T68 719 aa22.72■■□□□ 1.23
PSPC1-206ENST00000619300 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.72■■□□□ 1.23
PSPC1-206ENST00000619300 WASHC4Q2M389 1173 aa22.72■■□□□ 1.23
PSPC1-206ENST00000619300 APPBP2Q92624 585 aa22.72■■□□□ 1.23
PSPC1-206ENST00000619300 ARHGEF1Q92888 912 aaKnown RBP22.72■■□□□ 1.23
PSPC1-206ENST00000619300 NYXQ9GZU5 481 aa22.72■■□□□ 1.23
PSPC1-206ENST00000619300 LARGE1O95461 756 aa22.71■■□□□ 1.23
PSPC1-206ENST00000619300 SKOR2Q2VWA4 1001 aaPredicted RBP22.71■■□□□ 1.23
PSPC1-206ENST00000619300 ZSCAN25Q6NSZ9 544 aa22.7■■□□□ 1.23
PSPC1-206ENST00000619300 C3orf67Q6ZVT6 689 aa22.7■■□□□ 1.23
PSPC1-206ENST00000619300 TPCN1Q9ULQ1 816 aa22.7■■□□□ 1.23
PSPC1-206ENST00000619300 LAMB2P55268 1798 aa22.7■■□□□ 1.22
PSPC1-206ENST00000619300 ME3Q16798 604 aa22.7■■□□□ 1.22
PSPC1-206ENST00000619300 SNAP23O00161 211 aa22.69■■□□□ 1.22
PSPC1-206ENST00000619300 CHRNDQ07001 517 aa22.69■■□□□ 1.22
PSPC1-206ENST00000619300 AMIGO3Q86WK7 504 aa22.69■■□□□ 1.22
PSPC1-206ENST00000619300 MCTP1Q6DN14 999 aa22.69■■□□□ 1.22
PSPC1-206ENST00000619300 ANKRD18AQ8IVF6 992 aa22.69■■□□□ 1.22
PSPC1-206ENST00000619300 TCEANC2Q96MN5 208 aa22.69■■□□□ 1.22
PSPC1-206ENST00000619300 PIH1D3Q9NQM4 214 aaKnown RBP22.69■■□□□ 1.22
PSPC1-206ENST00000619300 SMC3Q9UQE7 1217 aa22.69■■□□□ 1.22
PSPC1-206ENST00000619300 SCN7AQ01118 1682 aa22.68■■□□□ 1.22
PSPC1-206ENST00000619300 TOB2Q14106 344 aaPredicted RBP22.68■■□□□ 1.22
PSPC1-206ENST00000619300 TRAPPC3LQ5T215 181 aa22.68■■□□□ 1.22
PSPC1-206ENST00000619300 NBPF5PQ86XG9 351 aaPredicted RBP22.68■■□□□ 1.22
PSPC1-206ENST00000619300 CCDC83Q8IWF9 413 aa22.68■■□□□ 1.22
PSPC1-206ENST00000619300 PUS7LQ9H0K6 701 aaKnown RBP22.68■■□□□ 1.22
PSPC1-206ENST00000619300 ADD2P35612 726 aa22.67■■□□□ 1.22
PSPC1-206ENST00000619300 SLC9C2Q5TAH2 1124 aa22.67■■□□□ 1.22
PSPC1-206ENST00000619300 TPTE2Q6XPS3 522 aa22.67■■□□□ 1.22
PSPC1-206ENST00000619300 SPATA5Q8NB90 893 aa22.67■■□□□ 1.22
PSPC1-206ENST00000619300 BSDC1Q9NW68 430 aaPredicted RBP22.67■■□□□ 1.22
PSPC1-206ENST00000619300 LY75O60449 1722 aa22.67■■□□□ 1.22
PSPC1-206ENST00000619300 HMGB1P09429 215 aaKnown RBP22.67■■□□□ 1.22
PSPC1-206ENST00000619300 FOXD4L5Q5VV16 416 aaPredicted RBP22.67■■□□□ 1.22
PSPC1-206ENST00000619300 FOXD4L4Q8WXT5 416 aaPredicted RBP22.67■■□□□ 1.22
PSPC1-206ENST00000619300 CTNNA3Q9UI47 895 aa22.67■■□□□ 1.22
PSPC1-206ENST00000619300 AKAP11Q9UKA4 1901 aa22.67■■□□□ 1.22
PSPC1-206ENST00000619300 SBF2Q86WG5 1849 aa22.66■■□□□ 1.22
PSPC1-206ENST00000619300 RFC4P35249 363 aa22.66■■□□□ 1.22
PSPC1-206ENST00000619300 UBE3CQ15386 1083 aa22.66■■□□□ 1.22
PSPC1-206ENST00000619300 FAM196AQ6ZSG2 479 aa22.66■■□□□ 1.22
PSPC1-206ENST00000619300 STOX1Q6ZVD7 989 aa22.66■■□□□ 1.22
PSPC1-206ENST00000619300 NLRP3Q96P20 1036 aa22.66■■□□□ 1.22
PSPC1-206ENST00000619300 WDR33Q9C0J8 1336 aaKnown RBP22.66■■□□□ 1.22
PSPC1-206ENST00000619300 IDH1O75874 414 aaKnown RBP22.65■■□□□ 1.22
PSPC1-206ENST00000619300 GZF1Q9H116 711 aaPredicted RBP22.65■■□□□ 1.22
PSPC1-206ENST00000619300 LRRC4BQ9NT99 713 aa22.65■■□□□ 1.22
PSPC1-206ENST00000619300 ST3GAL1Q11201 340 aa22.65■■□□□ 1.22
PSPC1-206ENST00000619300 RASGRF1Q13972 1273 aa22.65■■□□□ 1.22
PSPC1-206ENST00000619300 NECAB1Q8N987 351 aa22.65■■□□□ 1.22
PSPC1-206ENST00000619300 FOXP2O15409 715 aa22.64■■□□□ 1.22
PSPC1-206ENST00000619300 BCAMP50895 628 aa22.64■■□□□ 1.22
PSPC1-206ENST00000619300 GPAA1O43292 621 aa22.64■■□□□ 1.21
PSPC1-206ENST00000619300 DHX32Q7L7V1 743 aaKnown RBP22.64■■□□□ 1.21
PSPC1-206ENST00000619300 ARAP2Q8WZ64 1704 aa22.63■■□□□ 1.21
PSPC1-206ENST00000619300 A0A0G2JLW4 131 aa22.63■■□□□ 1.21
PSPC1-206ENST00000619300 E7EWF7 191 aa22.63■■□□□ 1.21
PSPC1-206ENST00000619300 PHF14O94880 888 aa22.63■■□□□ 1.21
PSPC1-206ENST00000619300 TTLL5Q6EMB2 1281 aa22.63■■□□□ 1.21
PSPC1-206ENST00000619300 Q6ZUG5 572 aa22.63■■□□□ 1.21
PSPC1-206ENST00000619300 LMBRD1Q9NUN5 540 aa22.63■■□□□ 1.21
PSPC1-206ENST00000619300 FGAP02671 866 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 PDE6AP16499 860 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 GJB2P29033 226 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 KRT27Q7Z3Y8 459 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 MINPP1Q9UNW1 487 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 TAF1LQ8IZX4 1826 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 C4BP0C0L5 1744 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 ZNF532Q9HCE3 1301 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 ADRA2BP18089 450 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 SYT1P21579 422 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 UBE4AQ14139 1066 aa22.62■■□□□ 1.21
PSPC1-206ENST00000619300 CELF1Q92879 486 aaKnown RBP22.62■■□□□ 1.21
PSPC1-206ENST00000619300 TCRBV5S4A2TA0A5A2 114 aa22.61■■□□□ 1.21
PSPC1-206ENST00000619300 STX6O43752 255 aa22.61■■□□□ 1.21
PSPC1-206ENST00000619300 RPS8P62241 208 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 603 ms