RNA–Protein interactions for RNA: ENST00000618773.4

UCHL3-206, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 5 BASIC

Gene UCHL3, Length 1,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-206ENST00000618773 SUSD4Q5VX71 490 aa13.63□□□□□ -0.23
UCHL3-206ENST00000618773 NRG2O14511 850 aaPredicted RBP13.62□□□□□ -0.23
UCHL3-206ENST00000618773 ANXA1P04083 346 aa13.62□□□□□ -0.23
UCHL3-206ENST00000618773 NEFMP07197 916 aa13.62□□□□□ -0.23
UCHL3-206ENST00000618773 TRAF7Q6Q0C0 670 aa13.62□□□□□ -0.23
UCHL3-206ENST00000618773 BLOC1S3Q6QNY0 202 aa13.62□□□□□ -0.23
UCHL3-206ENST00000618773 KIF6Q6ZMV9 814 aa13.62□□□□□ -0.23
UCHL3-206ENST00000618773 ZNF34Q8IZ26 560 aa13.62□□□□□ -0.23
UCHL3-206ENST00000618773 TAF1DQ9H5J8 278 aaPredicted RBP13.62□□□□□ -0.23
UCHL3-206ENST00000618773 DUOX1Q9NRD9 1551 aa13.62□□□□□ -0.23
UCHL3-206ENST00000618773 IARSP41252 1262 aaKnown RBP13.61□□□□□ -0.23
UCHL3-206ENST00000618773 SYNE4Q8N205 404 aa13.61□□□□□ -0.23
UCHL3-206ENST00000618773 NYXQ9GZU5 481 aa13.61□□□□□ -0.23
UCHL3-206ENST00000618773 TSPYL4Q9UJ04 414 aa13.61□□□□□ -0.23
UCHL3-206ENST00000618773 ERBB4Q15303 1308 aa13.61□□□□□ -0.23
UCHL3-206ENST00000618773 PASKQ96RG2 1323 aa13.61□□□□□ -0.23
UCHL3-206ENST00000618773 HSPA1AP0DMV8 641 aaKnown RBP13.6□□□□□ -0.23
UCHL3-206ENST00000618773 HSPA1BP0DMV9 641 aaKnown RBP13.6□□□□□ -0.23
UCHL3-206ENST00000618773 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
UCHL3-206ENST00000618773 TMPOP42166 694 aaKnown RBP13.6□□□□□ -0.23
UCHL3-206ENST00000618773 RIPK4P57078 832 aa13.6□□□□□ -0.23
UCHL3-206ENST00000618773 KRT24Q2M2I5 525 aa13.6□□□□□ -0.23
UCHL3-206ENST00000618773 GIGYF2Q6Y7W6 1299 aaKnown RBP13.6□□□□□ -0.23
UCHL3-206ENST00000618773 RTKN2Q8IZC4 609 aa13.6□□□□□ -0.23
UCHL3-206ENST00000618773 THSD7BQ9C0I4 1608 aa13.6□□□□□ -0.23
UCHL3-206ENST00000618773 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
UCHL3-206ENST00000618773 FZD9O00144 591 aa13.59□□□□□ -0.23
UCHL3-206ENST00000618773 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
UCHL3-206ENST00000618773 ALDH1B1P30837 517 aa13.59□□□□□ -0.23
UCHL3-206ENST00000618773 HOXA10P31260 410 aaPredicted RBP13.59□□□□□ -0.23
UCHL3-206ENST00000618773 LDHDQ86WU2 507 aa13.59□□□□□ -0.23
UCHL3-206ENST00000618773 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
UCHL3-206ENST00000618773 PSMD1Q99460 953 aa13.59□□□□□ -0.23
UCHL3-206ENST00000618773 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
UCHL3-206ENST00000618773 MKRN1Q9UHC7 482 aaKnown RBP13.58□□□□□ -0.24
UCHL3-206ENST00000618773 CFHP08603 1231 aa13.57□□□□□ -0.24
UCHL3-206ENST00000618773 RALBP1Q15311 655 aa13.57□□□□□ -0.24
UCHL3-206ENST00000618773 EAPPQ56P03 285 aaPredicted RBP13.57□□□□□ -0.24
UCHL3-206ENST00000618773 RPGRQ92834 1020 aaKnown RBP13.57□□□□□ -0.24
UCHL3-206ENST00000618773 MYBBP1AQ9BQG0 1328 aaKnown RBP13.57□□□□□ -0.24
UCHL3-206ENST00000618773 CNTNAP1P78357 1384 aa13.57□□□□□ -0.24
UCHL3-206ENST00000618773 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
UCHL3-206ENST00000618773 PPEF1O14829 653 aaPredicted RBP13.56□□□□□ -0.24
UCHL3-206ENST00000618773 ACTN4O43707 911 aaKnown RBP13.56□□□□□ -0.24
UCHL3-206ENST00000618773 OATP04181 439 aa13.56□□□□□ -0.24
UCHL3-206ENST00000618773 EPHX2P34913 555 aa13.56□□□□□ -0.24
UCHL3-206ENST00000618773 DDX10Q13206 875 aaKnown RBP13.56□□□□□ -0.24
UCHL3-206ENST00000618773 CRAMP1Q96RY5 1269 aa13.56□□□□□ -0.24
UCHL3-206ENST00000618773 PNNQ9H307 717 aaKnown RBP13.56□□□□□ -0.24
UCHL3-206ENST00000618773 HACL1Q9UJ83 578 aa13.56□□□□□ -0.24
UCHL3-206ENST00000618773 ABCC4O15439 1325 aa13.56□□□□□ -0.24
UCHL3-206ENST00000618773 SPEF2Q9C093 1822 aa13.55□□□□□ -0.24
UCHL3-206ENST00000618773 NEUROD2Q15784 382 aa13.55□□□□□ -0.24
UCHL3-206ENST00000618773 GPC2Q8N158 579 aa13.55□□□□□ -0.24
UCHL3-206ENST00000618773 XAGE3Q8WTP9 111 aa13.55□□□□□ -0.24
UCHL3-206ENST00000618773 ZNF428Q96B54 188 aa13.55□□□□□ -0.24
UCHL3-206ENST00000618773 SCNN1DP51172 638 aa13.54□□□□□ -0.24
UCHL3-206ENST00000618773 PARP10Q53GL7 1025 aa13.54□□□□□ -0.24
UCHL3-206ENST00000618773 COPS6Q7L5N1 327 aa13.54□□□□□ -0.24
UCHL3-206ENST00000618773 NLRP10Q86W26 655 aa13.54□□□□□ -0.24
UCHL3-206ENST00000618773 RBM17Q96I25 401 aaKnown RBP13.54□□□□□ -0.24
UCHL3-206ENST00000618773 BABAM1Q9NWV8 329 aa13.54□□□□□ -0.24
UCHL3-206ENST00000618773 SCN9AQ15858 1988 aa13.54□□□□□ -0.24
UCHL3-206ENST00000618773 PSME4Q14997 1843 aa13.53□□□□□ -0.24
UCHL3-206ENST00000618773 CHL1O00533 1208 aa13.53□□□□□ -0.24
UCHL3-206ENST00000618773 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
UCHL3-206ENST00000618773 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
UCHL3-206ENST00000618773 AIMP1Q12904 312 aaKnown RBP13.53□□□□□ -0.24
UCHL3-206ENST00000618773 SLC10A5Q5PT55 438 aa13.53□□□□□ -0.24
UCHL3-206ENST00000618773 MAP1SQ66K74 1059 aaPredicted RBP13.53□□□□□ -0.24
UCHL3-206ENST00000618773 CC2D2BQ6DHV5 1058 aa13.53□□□□□ -0.24
UCHL3-206ENST00000618773 SMYD5Q6GMV2 418 aa13.53□□□□□ -0.24
UCHL3-206ENST00000618773 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
UCHL3-206ENST00000618773 UTP14AQ9BVJ6 771 aaKnown RBP13.53□□□□□ -0.24
UCHL3-206ENST00000618773 CHPF2Q9P2E5 772 aa13.53□□□□□ -0.24
UCHL3-206ENST00000618773 GJA3Q9Y6H8 435 aa13.53□□□□□ -0.24
UCHL3-206ENST00000618773 RNF223E7ERA6 249 aa13.52□□□□□ -0.25
UCHL3-206ENST00000618773 TLL1O43897 1013 aa13.52□□□□□ -0.25
UCHL3-206ENST00000618773 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
UCHL3-206ENST00000618773 HIC1Q14526 733 aa13.52□□□□□ -0.25
UCHL3-206ENST00000618773 AOC3Q16853 763 aa13.52□□□□□ -0.25
UCHL3-206ENST00000618773 TNS4Q8IZW8 715 aa13.52□□□□□ -0.25
UCHL3-206ENST00000618773 LARGE2Q8N3Y3 721 aa13.52□□□□□ -0.25
UCHL3-206ENST00000618773 JDP2Q8WYK2 163 aa13.52□□□□□ -0.25
UCHL3-206ENST00000618773 DDX21Q9NR30 783 aaKnown RBP eCLIP13.52□□□□□ -0.25
UCHL3-206ENST00000618773 ZNF646O15015 1829 aaPredicted RBP13.52□□□□□ -0.25
UCHL3-206ENST00000618773 MYH3P11055 1940 aa13.52□□□□□ -0.25
UCHL3-206ENST00000618773 POLR2AP24928 1970 aaKnown RBP13.52□□□□□ -0.25
UCHL3-206ENST00000618773 SLC19A1P41440 591 aa13.51□□□□□ -0.25
UCHL3-206ENST00000618773 EPS15P42566 896 aa13.51□□□□□ -0.25
UCHL3-206ENST00000618773 EIF6P56537 245 aaKnown RBP13.51□□□□□ -0.25
UCHL3-206ENST00000618773 PXYLP1Q8TE99 480 aa13.51□□□□□ -0.25
UCHL3-206ENST00000618773 RUNDC1Q96C34 613 aa13.51□□□□□ -0.25
UCHL3-206ENST00000618773 NLRP3Q96P20 1036 aa13.51□□□□□ -0.25
UCHL3-206ENST00000618773 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
UCHL3-206ENST00000618773 ATP6V0A2Q9Y487 856 aa13.51□□□□□ -0.25
UCHL3-206ENST00000618773 TMEM88BA6NKF7 163 aa13.5□□□□□ -0.25
UCHL3-206ENST00000618773 LCE2BO14633 110 aa13.5□□□□□ -0.25
UCHL3-206ENST00000618773 FOXN1O15353 648 aa13.5□□□□□ -0.25
UCHL3-206ENST00000618773 PPIP5K2O43314 1243 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms