RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PDE4DIPQ5VU43 2346 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 PCNTO95613 3336 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 ZSWIM8A7E2V4 1837 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 DACT2Q5SW24 774 aa6.04□□□□□ -1.44
SNCA-213ENST00000618500 RPAP1Q9BWH6 1393 aaPredicted RBP6.04□□□□□ -1.44
SNCA-213ENST00000618500 LOC285556D6RIA3 1793 aa6.04□□□□□ -1.44
SNCA-213ENST00000618500 FAM177BA6PVY3 158 aa6.04□□□□□ -1.44
SNCA-213ENST00000618500 DLL1O00548 723 aa6.04□□□□□ -1.44
SNCA-213ENST00000618500 TMEM106CQ9BVX2 250 aa6.04□□□□□ -1.44
SNCA-213ENST00000618500 ZC3H12CQ9C0D7 883 aaKnown RBP6.04□□□□□ -1.44
SNCA-213ENST00000618500 DBNDD1Q9H9R9 158 aa6.04□□□□□ -1.44
SNCA-213ENST00000618500 FRMPD3Q5JV73 1810 aa6.04□□□□□ -1.44
SNCA-213ENST00000618500 LMOD3Q0VAK6 560 aa6.04□□□□□ -1.44
SNCA-213ENST00000618500 COA1Q9GZY4 146 aa6.04□□□□□ -1.44
SNCA-213ENST00000618500 TRIM17Q9Y577 477 aa6.04□□□□□ -1.44
SNCA-213ENST00000618500 ASTN2O75129 1339 aaPredicted RBP6.04□□□□□ -1.44
SNCA-213ENST00000618500 RPS8P62241 208 aaKnown RBP6.03□□□□□ -1.44
SNCA-213ENST00000618500 PTPN12Q05209 780 aaKnown RBP6.03□□□□□ -1.44
SNCA-213ENST00000618500 ANKRD13DQ6ZTN6 518 aa6.03□□□□□ -1.44
SNCA-213ENST00000618500 CELF1Q92879 486 aaKnown RBP6.03□□□□□ -1.44
SNCA-213ENST00000618500 TRMT112Q9UI30 125 aaKnown RBP6.03□□□□□ -1.44
SNCA-213ENST00000618500 FAM205AQ6ZU69 1335 aa6.03□□□□□ -1.44
SNCA-213ENST00000618500 IRS2Q9Y4H2 1338 aa6.03□□□□□ -1.44
SNCA-213ENST00000618500 UBE2Q2LH0YL09 131 aa6.03□□□□□ -1.44
SNCA-213ENST00000618500 SP3Q02447 781 aa6.03□□□□□ -1.44
SNCA-213ENST00000618500 ZBTB38Q8NAP3 1195 aaPredicted RBP6.03□□□□□ -1.44
SNCA-213ENST00000618500 EFCC1Q9HA90 598 aa6.03□□□□□ -1.44
SNCA-213ENST00000618500 ADGRA2Q96PE1 1338 aa6.03□□□□□ -1.44
SNCA-213ENST00000618500 DOCK2Q92608 1830 aa6.02□□□□□ -1.44
SNCA-213ENST00000618500 IGF2BP3O00425 579 aaKnown RBP eCLIP6.02□□□□□ -1.45
SNCA-213ENST00000618500 ZBTB7BO15156 539 aaPredicted RBP6.02□□□□□ -1.45
SNCA-213ENST00000618500 EN2P19622 333 aaPredicted RBP6.02□□□□□ -1.45
SNCA-213ENST00000618500 PPP2R1AP30153 589 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 LHX8Q68G74 356 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 SHISA4Q96DD7 197 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 HTATIP2Q9BUP3 242 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 R3HDMLQ9H3Y0 253 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 STXBP5LQ9Y2K9 1186 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 H0YGN5 161 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 WNT10BO00744 389 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 PCCAP05165 728 aaPredicted RBP6.02□□□□□ -1.45
SNCA-213ENST00000618500 MYL6BP14649 208 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 FXR2P51116 673 aaKnown RBP eCLIP6.02□□□□□ -1.45
SNCA-213ENST00000618500 DDX60LQ5H9U9 1706 aaKnown RBP6.02□□□□□ -1.45
SNCA-213ENST00000618500 DLK2Q6UY11 383 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 PLSCR2Q9NRY7 297 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 LEMD3Q9Y2U8 911 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 LTBP2Q14767 1821 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 PHIPQ8WWQ0 1821 aa6.02□□□□□ -1.45
SNCA-213ENST00000618500 C6orf229H3BNL8 230 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 UFL1O94874 794 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 HCLS1P14317 486 aaPredicted RBP6.01□□□□□ -1.45
SNCA-213ENST00000618500 CCDC152Q4G0S7 254 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 FAM109BQ6ICB4 259 aaPredicted RBP6.01□□□□□ -1.45
SNCA-213ENST00000618500 HELBQ8NG08 1087 aaPredicted RBP6.01□□□□□ -1.45
SNCA-213ENST00000618500 CD99L2Q8TCZ2 262 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 HYPKQ9NX55 129 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 NSFL1CQ9UNZ2 370 aaKnown RBP6.01□□□□□ -1.45
SNCA-213ENST00000618500 CRHR2Q13324 411 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 SUPT20HL1Q3ZLR7 823 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 RRP7AQ9Y3A4 280 aaKnown RBP6.01□□□□□ -1.45
SNCA-213ENST00000618500 PDE8AO60658 829 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 NEFMP07197 916 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 GJA8P48165 433 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 IREB2P48200 963 aaKnown RBP6.01□□□□□ -1.45
SNCA-213ENST00000618500 ANKRD13AQ8IZ07 590 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 CCDC191Q8NCU4 936 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 XAGE3Q8WTP9 111 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 MS4A4AQ96JQ5 239 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 ZFYVE28Q9HCC9 887 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 KCNQ5Q9NR82 932 aa6.01□□□□□ -1.45
SNCA-213ENST00000618500 BSDC1Q9NW68 430 aaPredicted RBP6.01□□□□□ -1.45
SNCA-213ENST00000618500 PTPRFP10586 1907 aa6□□□□□ -1.45
SNCA-213ENST00000618500 DOCK1Q14185 1865 aa6□□□□□ -1.45
SNCA-213ENST00000618500 U2AF1L5P0DN76 240 aaPredicted RBP6□□□□□ -1.45
SNCA-213ENST00000618500 GTF2A2P52657 109 aa6□□□□□ -1.45
SNCA-213ENST00000618500 U2AF1Q01081 240 aaKnown RBP eCLIP6□□□□□ -1.45
SNCA-213ENST00000618500 DOK7Q18PE1 504 aa6□□□□□ -1.45
SNCA-213ENST00000618500 COPS6Q7L5N1 327 aa6□□□□□ -1.45
SNCA-213ENST00000618500 SLC10A4Q96EP9 437 aa6□□□□□ -1.45
SNCA-213ENST00000618500 PLA2G12BQ9BX93 195 aa6□□□□□ -1.45
SNCA-213ENST00000618500 CHMP4AQ9BY43 222 aa6□□□□□ -1.45
SNCA-213ENST00000618500 RBM27Q9P2N5 1060 aaKnown RBP6□□□□□ -1.45
SNCA-213ENST00000618500 IRS4O14654 1257 aaPredicted RBP6□□□□□ -1.45
SNCA-213ENST00000618500 DCTN1Q14203 1278 aa6□□□□□ -1.45
SNCA-213ENST00000618500 PROSER3Q2NL68 480 aa6□□□□□ -1.45
SNCA-213ENST00000618500 LRIT3Q3SXY7 679 aa6□□□□□ -1.45
SNCA-213ENST00000618500 SLC9C1Q4G0N8 1177 aa6□□□□□ -1.45
SNCA-213ENST00000618500 CC2D1BQ5T0F9 858 aaKnown RBP6□□□□□ -1.45
SNCA-213ENST00000618500 OGFOD1Q8N543 542 aa6□□□□□ -1.45
SNCA-213ENST00000618500 ANKLE1Q8NAG6 615 aa6□□□□□ -1.45
SNCA-213ENST00000618500 DBF4Q9UBU7 674 aaPredicted RBP6□□□□□ -1.45
SNCA-213ENST00000618500 MYH13Q9UKX3 1938 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 CHL1O00533 1208 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 RIMBP2O15034 1052 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 PPP1R12BO60237 982 aaPredicted RBP5.99□□□□□ -1.45
SNCA-213ENST00000618500 GJA5P36382 358 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 NBPF9Q3BBW0 867 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 SLC17A8Q8NDX2 589 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 CDC5LQ99459 802 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms