RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 SPATA31A1Q5TZJ5 1347 aa23.58■■□□□ 1.36
PCDHA13-203ENST00000617769 HSP90B1P14625 803 aaKnown RBP23.58■■□□□ 1.36
PCDHA13-203ENST00000617769 TYRO3Q06418 890 aa23.58■■□□□ 1.36
PCDHA13-203ENST00000617769 SPC24Q8NBT2 197 aa23.58■■□□□ 1.36
PCDHA13-203ENST00000617769 FAM200AQ8TCP9 573 aa23.58■■□□□ 1.36
PCDHA13-203ENST00000617769 LRRC2Q9BYS8 371 aa23.58■■□□□ 1.36
PCDHA13-203ENST00000617769 TNMDQ9H2S6 317 aa23.58■■□□□ 1.36
PCDHA13-203ENST00000617769 U3KPZ7 1027 aaPredicted RBP23.58■■□□□ 1.36
PCDHA13-203ENST00000617769 TRIM28Q13263 835 aaKnown RBP23.57■■□□□ 1.36
PCDHA13-203ENST00000617769 ADORA1P30542 326 aa23.57■■□□□ 1.36
PCDHA13-203ENST00000617769 TAF7LQ5H9L4 462 aa23.57■■□□□ 1.36
PCDHA13-203ENST00000617769 BRF1Q92994 677 aa23.57■■□□□ 1.36
PCDHA13-203ENST00000617769 DDX11Q96FC9 970 aa23.57■■□□□ 1.36
PCDHA13-203ENST00000617769 LUZP1Q86V48 1076 aa23.56■■□□□ 1.36
PCDHA13-203ENST00000617769 CEP126Q9P2H0 1117 aa23.56■■□□□ 1.36
PCDHA13-203ENST00000617769 FAM177BA6PVY3 158 aa23.55■■□□□ 1.36
PCDHA13-203ENST00000617769 MARCH10Q8NA82 808 aaPredicted RBP23.55■■□□□ 1.36
PCDHA13-203ENST00000617769 PAG1Q9NWQ8 432 aa23.55■■□□□ 1.36
PCDHA13-203ENST00000617769 DZIP3Q86Y13 1208 aaKnown RBP23.55■■□□□ 1.36
PCDHA13-203ENST00000617769 KCNF1Q9H3M0 494 aa23.55■■□□□ 1.36
PCDHA13-203ENST00000617769 GREM2Q9H772 168 aa23.55■■□□□ 1.36
PCDHA13-203ENST00000617769 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.55■■□□□ 1.36
PCDHA13-203ENST00000617769 IFIT5Q13325 482 aaKnown RBP23.54■■□□□ 1.36
PCDHA13-203ENST00000617769 KBTBD3Q8NAB2 608 aa23.54■■□□□ 1.36
PCDHA13-203ENST00000617769 PGBD1Q96JS3 809 aa23.54■■□□□ 1.36
PCDHA13-203ENST00000617769 TRMT112Q9UI30 125 aaKnown RBP23.54■■□□□ 1.36
PCDHA13-203ENST00000617769 RFX7Q2KHR2 1363 aa23.54■■□□□ 1.36
PCDHA13-203ENST00000617769 NR1I2O75469 434 aa23.54■■□□□ 1.36
PCDHA13-203ENST00000617769 IFIT1P09914 478 aaKnown RBP23.54■■□□□ 1.36
PCDHA13-203ENST00000617769 STOX1Q6ZVD7 989 aa23.54■■□□□ 1.36
PCDHA13-203ENST00000617769 SPTLC3Q9NUV7 552 aa23.54■■□□□ 1.36
PCDHA13-203ENST00000617769 COL22A1Q8NFW1 1626 aaPredicted RBP23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 CIAO1O76071 339 aa23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 FKBP4Q02790 459 aaKnown RBP eCLIP23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 SCRN1Q12765 414 aa23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 H3BQV1 296 aa23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 FGD1P98174 961 aa23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 RESTQ13127 1097 aa23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 ANO6Q4KMQ2 910 aa23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 IFFO2Q5TF58 517 aa23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 GPR108Q9NPR9 543 aa23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 DDX19AQ9NUU7 478 aaKnown RBP23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 LTBP4Q8N2S1 1624 aa23.53■■□□□ 1.36
PCDHA13-203ENST00000617769 CSF1RP07333 972 aa23.52■■□□□ 1.36
PCDHA13-203ENST00000617769 BICD2Q8TD16 824 aa23.52■■□□□ 1.36
PCDHA13-203ENST00000617769 ITGA6P23229 1130 aa23.52■■□□□ 1.36
PCDHA13-203ENST00000617769 ATP6V1AP38606 617 aa23.52■■□□□ 1.36
PCDHA13-203ENST00000617769 MYRIPQ8NFW9 859 aa23.52■■□□□ 1.36
PCDHA13-203ENST00000617769 TTLL11Q8NHH1 800 aa23.52■■□□□ 1.36
PCDHA13-203ENST00000617769 PYCARDQ9ULZ3 195 aa23.52■■□□□ 1.36
PCDHA13-203ENST00000617769 IRS4O14654 1257 aaPredicted RBP23.51■■□□□ 1.35
PCDHA13-203ENST00000617769 GORABQ5T7V8 394 aa23.51■■□□□ 1.35
PCDHA13-203ENST00000617769 XAGE2Q96GT9 111 aa23.51■■□□□ 1.35
PCDHA13-203ENST00000617769 CLSTN2Q9H4D0 955 aa23.51■■□□□ 1.35
PCDHA13-203ENST00000617769 UBN2Q6ZU65 1347 aa23.51■■□□□ 1.35
PCDHA13-203ENST00000617769 CBX8Q9HC52 389 aa23.51■■□□□ 1.35
PCDHA13-203ENST00000617769 SH3TC1Q8TE82 1336 aa23.51■■□□□ 1.35
PCDHA13-203ENST00000617769 KCNQ2O43526 872 aa23.5■■□□□ 1.35
PCDHA13-203ENST00000617769 KIAA1524Q8TCG1 905 aa23.5■■□□□ 1.35
PCDHA13-203ENST00000617769 PLCH1Q4KWH8 1693 aa23.5■■□□□ 1.35
PCDHA13-203ENST00000617769 SCARF1Q14162 830 aa23.5■■□□□ 1.35
PCDHA13-203ENST00000617769 PI16Q6UXB8 463 aa23.5■■□□□ 1.35
PCDHA13-203ENST00000617769 RBM43Q6ZSC3 357 aaKnown RBP23.5■■□□□ 1.35
PCDHA13-203ENST00000617769 PLA2G12BQ9BX93 195 aa23.5■■□□□ 1.35
PCDHA13-203ENST00000617769 PHLPP1O60346 1717 aa23.5■■□□□ 1.35
PCDHA13-203ENST00000617769 DOT1LQ8TEK3 1739 aa23.5■■□□□ 1.35
PCDHA13-203ENST00000617769 A0A0G2JLW4 131 aa23.49■■□□□ 1.35
PCDHA13-203ENST00000617769 CEBPZQ03701 1054 aaKnown RBP23.49■■□□□ 1.35
PCDHA13-203ENST00000617769 LDHAL6AQ6ZMR3 332 aa23.49■■□□□ 1.35
PCDHA13-203ENST00000617769 PRIMPOLQ96LW4 560 aa23.49■■□□□ 1.35
PCDHA13-203ENST00000617769 IL6STP40189 918 aaPredicted RBP23.49■■□□□ 1.35
PCDHA13-203ENST00000617769 INTS5Q6P9B9 1019 aaKnown RBP23.49■■□□□ 1.35
PCDHA13-203ENST00000617769 MAP7D2Q96T17 732 aa23.49■■□□□ 1.35
PCDHA13-203ENST00000617769 LRP6O75581 1613 aa23.49■■□□□ 1.35
PCDHA13-203ENST00000617769 GOLGA6L6A8MZA4 724 aa23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 FOSBP53539 338 aa23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 CTSWP56202 376 aa23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 ITPK1Q13572 414 aa23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 DHX32Q7L7V1 743 aaKnown RBP23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 SMARCC2Q8TAQ2 1214 aa23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 ZSCAN16Q9H4T2 348 aaPredicted RBP23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 CRKLP46109 303 aaKnown RBP23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 HSP90AB3PQ58FF7 597 aa23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 METTL24Q5JXM2 366 aa23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 SPATA31A5Q5VU36 1347 aa23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 SPATA31A7Q8IWB4 1347 aa23.48■■□□□ 1.35
PCDHA13-203ENST00000617769 PFKFB2O60825 505 aa23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 TPM3P06753 285 aa23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 KCNQ4P56696 695 aa23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 APOBRQ0VD83 1088 aa23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 NSUN7Q8NE18 718 aaKnown RBP23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 TSC1Q92574 1164 aa23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 PALLDQ8WX93 1383 aa23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 LOC102724428A0A0B4J2F2 783 aa23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 PTGS1P23219 599 aa23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 SIK1P57059 783 aa23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 CNNM1Q9NRU3 951 aa23.47■■□□□ 1.35
PCDHA13-203ENST00000617769 LAMA4Q16363 1823 aa23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 PPFIA3O75145 1194 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms