RNA–Protein interactions for RNA: ENST00000617408.1

PCDHA11-203, Transcript of protocadherin alpha 11, humanhuman

TSL 3

Gene PCDHA11, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-203ENST00000617408 USP17L3A6NCW0 530 aa26.32■■□□□ 1.8
PCDHA11-203ENST00000617408 USP17L4A6NCW7 530 aa26.32■■□□□ 1.8
PCDHA11-203ENST00000617408 RSBN1LQ6PCB5 846 aaPredicted RBP26.32■■□□□ 1.8
PCDHA11-203ENST00000617408 USP17L1Q7RTZ2 530 aa26.32■■□□□ 1.8
PCDHA11-203ENST00000617408 PUS3Q9BZE2 481 aaKnown RBP26.32■■□□□ 1.8
PCDHA11-203ENST00000617408 TRIM27P14373 513 aa26.31■■□□□ 1.8
PCDHA11-203ENST00000617408 TBC1D10BQ4KMP7 808 aaPredicted RBP26.31■■□□□ 1.8
PCDHA11-203ENST00000617408 SAMD7Q7Z3H4 446 aa26.31■■□□□ 1.8
PCDHA11-203ENST00000617408 ZNF609O15014 1411 aa26.31■■□□□ 1.8
PCDHA11-203ENST00000617408 ATF7IPQ6VMQ6 1270 aa26.3■■□□□ 1.8
PCDHA11-203ENST00000617408 AGBL3Q8NEM8 1001 aa26.3■■□□□ 1.8
PCDHA11-203ENST00000617408 KLHDC4Q8TBB5 520 aa26.3■■□□□ 1.8
PCDHA11-203ENST00000617408 CREBZFQ9NS37 354 aa26.3■■□□□ 1.8
PCDHA11-203ENST00000617408 HIRAP54198 1017 aaPredicted RBP26.29■■□□□ 1.8
PCDHA11-203ENST00000617408 RBM26Q5T8P6 1007 aaKnown RBP26.29■■□□□ 1.8
PCDHA11-203ENST00000617408 INTS3Q68E01 1043 aaKnown RBP26.29■■□□□ 1.8
PCDHA11-203ENST00000617408 DNAJC5GQ8N7S2 189 aa26.29■■□□□ 1.8
PCDHA11-203ENST00000617408 CLUAP1Q96AJ1 413 aa26.29■■□□□ 1.8
PCDHA11-203ENST00000617408 MEIS3Q99687 375 aa26.29■■□□□ 1.8
PCDHA11-203ENST00000617408 TNNQ9UQP3 1299 aa26.29■■□□□ 1.8
PCDHA11-203ENST00000617408 EGFRP00533 1210 aa26.28■■□□□ 1.8
PCDHA11-203ENST00000617408 KLRG1Q96E93 195 aa26.28■■□□□ 1.8
PCDHA11-203ENST00000617408 LRRFIP2Q9Y608 721 aaKnown RBP26.28■■□□□ 1.8
PCDHA11-203ENST00000617408 MROH5Q6ZUA9 1318 aa26.28■■□□□ 1.8
PCDHA11-203ENST00000617408 IRS2Q9Y4H2 1338 aa26.28■■□□□ 1.8
PCDHA11-203ENST00000617408 KIF4BQ2VIQ3 1234 aa26.27■■□□□ 1.8
PCDHA11-203ENST00000617408 LRRC24Q50LG9 513 aa26.27■■□□□ 1.8
PCDHA11-203ENST00000617408 ZKSCAN2Q63HK3 967 aa26.27■■□□□ 1.8
PCDHA11-203ENST00000617408 ZNF804AQ7Z570 1209 aa26.27■■□□□ 1.8
PCDHA11-203ENST00000617408 TMEM88BA6NKF7 163 aa26.26■■□□□ 1.79
PCDHA11-203ENST00000617408 METTL24Q5JXM2 366 aa26.26■■□□□ 1.79
PCDHA11-203ENST00000617408 C15orf52Q6ZUT6 534 aaKnown RBP26.26■■□□□ 1.79
PCDHA11-203ENST00000617408 MXD3Q9BW11 206 aa26.26■■□□□ 1.79
PCDHA11-203ENST00000617408 CD209Q9NNX6 404 aa26.26■■□□□ 1.79
PCDHA11-203ENST00000617408 HDAC5Q9UQL6 1122 aa26.26■■□□□ 1.79
PCDHA11-203ENST00000617408 RIPOR2Q9Y4F9 1068 aa26.26■■□□□ 1.79
PCDHA11-203ENST00000617408 TRAF5O00463 557 aa26.25■■□□□ 1.79
PCDHA11-203ENST00000617408 DACT2Q5SW24 774 aa26.25■■□□□ 1.79
PCDHA11-203ENST00000617408 STRIP1Q5VSL9 837 aa26.25■■□□□ 1.79
PCDHA11-203ENST00000617408 ZC3H15Q8WU90 426 aaKnown RBP26.25■■□□□ 1.79
PCDHA11-203ENST00000617408 TRPM7Q96QT4 1865 aa26.24■■□□□ 1.79
PCDHA11-203ENST00000617408 MYO3BQ8WXR4 1341 aa26.24■■□□□ 1.79
PCDHA11-203ENST00000617408 USP17L8P0C7I0 530 aa26.24■■□□□ 1.79
PCDHA11-203ENST00000617408 GTF2IP78347 998 aa26.24■■□□□ 1.79
PCDHA11-203ENST00000617408 FMR1Q06787 632 aaKnown RBP eCLIP26.24■■□□□ 1.79
PCDHA11-203ENST00000617408 TTLL5Q6EMB2 1281 aa26.24■■□□□ 1.79
PCDHA11-203ENST00000617408 GMLQ99445 158 aa26.24■■□□□ 1.79
PCDHA11-203ENST00000617408 GLIS2Q9BZE0 524 aaPredicted RBP26.24■■□□□ 1.79
PCDHA11-203ENST00000617408 GNAI3P08754 354 aa26.23■■□□□ 1.79
PCDHA11-203ENST00000617408 UBE4AQ14139 1066 aa26.23■■□□□ 1.79
PCDHA11-203ENST00000617408 PGAP2Q9UHJ9 254 aa26.23■■□□□ 1.79
PCDHA11-203ENST00000617408 RFX5P48382 616 aaPredicted RBP26.22■■□□□ 1.79
PCDHA11-203ENST00000617408 ZNF280AP59817 542 aaPredicted RBP26.22■■□□□ 1.79
PCDHA11-203ENST00000617408 MKRN1Q9UHC7 482 aaKnown RBP26.22■■□□□ 1.79
PCDHA11-203ENST00000617408 FTSJ3Q8IY81 847 aaKnown RBP26.21■■□□□ 1.79
PCDHA11-203ENST00000617408 PTPN12Q05209 780 aaKnown RBP26.2■■□□□ 1.78
PCDHA11-203ENST00000617408 CDC37L1Q7L3B6 337 aa26.2■■□□□ 1.78
PCDHA11-203ENST00000617408 TMEM57Q8N5G2 664 aa26.2■■□□□ 1.78
PCDHA11-203ENST00000617408 SIL1Q9H173 461 aa26.2■■□□□ 1.78
PCDHA11-203ENST00000617408 MYOZ2Q9NPC6 264 aa26.2■■□□□ 1.78
PCDHA11-203ENST00000617408 GGA3Q9NZ52 723 aa26.2■■□□□ 1.78
PCDHA11-203ENST00000617408 ABT1Q9ULW3 272 aaKnown RBP26.2■■□□□ 1.78
PCDHA11-203ENST00000617408 EYA2O00167 538 aa26.19■■□□□ 1.78
PCDHA11-203ENST00000617408 IL1R1P14778 569 aa26.19■■□□□ 1.78
PCDHA11-203ENST00000617408 GYG1P46976 350 aa26.19■■□□□ 1.78
PCDHA11-203ENST00000617408 OGFOD1Q8N543 542 aa26.19■■□□□ 1.78
PCDHA11-203ENST00000617408 VGLL2Q8N8G2 317 aa26.19■■□□□ 1.78
PCDHA11-203ENST00000617408 DCPSQ96C86 337 aaKnown RBP26.19■■□□□ 1.78
PCDHA11-203ENST00000617408 ZNF408Q9H9D4 720 aa26.19■■□□□ 1.78
PCDHA11-203ENST00000617408 PDE8BO95263 885 aa26.18■■□□□ 1.78
PCDHA11-203ENST00000617408 KIAA0825Q8IV33 1275 aa26.18■■□□□ 1.78
PCDHA11-203ENST00000617408 JAG2Q9Y219 1238 aa26.18■■□□□ 1.78
PCDHA11-203ENST00000617408 CNTNAP1P78357 1384 aa26.18■■□□□ 1.78
PCDHA11-203ENST00000617408 ASTN2O75129 1339 aaPredicted RBP26.17■■□□□ 1.78
PCDHA11-203ENST00000617408 KRT26Q7Z3Y9 468 aa26.17■■□□□ 1.78
PCDHA11-203ENST00000617408 USP48Q86UV5 1035 aa26.17■■□□□ 1.78
PCDHA11-203ENST00000617408 CELF2O95319 508 aaKnown RBP26.16■■□□□ 1.78
PCDHA11-203ENST00000617408 HIBADHP31937 336 aaKnown RBP26.16■■□□□ 1.78
PCDHA11-203ENST00000617408 SCARF1Q14162 830 aa26.16■■□□□ 1.78
PCDHA11-203ENST00000617408 PUM3Q15397 648 aaKnown RBP26.16■■□□□ 1.78
PCDHA11-203ENST00000617408 VPS37DQ86XT2 251 aa26.16■■□□□ 1.78
PCDHA11-203ENST00000617408 ARAP2Q8WZ64 1704 aa26.16■■□□□ 1.78
PCDHA11-203ENST00000617408 ADM5C9JUS6 153 aa26.15■■□□□ 1.78
PCDHA11-203ENST00000617408 ANGEL2Q5VTE6 544 aaKnown RBP26.15■■□□□ 1.78
PCDHA11-203ENST00000617408 ITPRIPQ8IWB1 547 aa26.15■■□□□ 1.78
PCDHA11-203ENST00000617408 DZIP1LQ8IYY4 767 aaKnown RBP26.15■■□□□ 1.78
PCDHA11-203ENST00000617408 JMYQ8N9B5 988 aa26.15■■□□□ 1.78
PCDHA11-203ENST00000617408 FAM84BQ96KN1 310 aaPredicted RBP26.15■■□□□ 1.78
PCDHA11-203ENST00000617408 HDAC9Q9UKV0 1011 aa26.15■■□□□ 1.78
PCDHA11-203ENST00000617408 PA2G4Q9UQ80 394 aaKnown RBP26.15■■□□□ 1.78
PCDHA11-203ENST00000617408 SRGAP3O43295 1099 aa26.14■■□□□ 1.78
PCDHA11-203ENST00000617408 GNAI2P04899 355 aa26.14■■□□□ 1.78
PCDHA11-203ENST00000617408 IFIT1P09914 478 aaKnown RBP26.14■■□□□ 1.78
PCDHA11-203ENST00000617408 CAVIN4Q5BKX8 364 aa26.14■■□□□ 1.78
PCDHA11-203ENST00000617408 CST9Q5W186 159 aa26.14■■□□□ 1.78
PCDHA11-203ENST00000617408 ATG9AQ7Z3C6 839 aa26.14■■□□□ 1.78
PCDHA11-203ENST00000617408 SULF1Q8IWU6 871 aa26.14■■□□□ 1.78
PCDHA11-203ENST00000617408 CERS5Q8N5B7 392 aa26.14■■□□□ 1.78
PCDHA11-203ENST00000617408 POLR2AP24928 1970 aaKnown RBP26.14■■□□□ 1.77
PCDHA11-203ENST00000617408 F8W031 263 aaPredicted RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms